Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g01195 | ATGGCGCCTTCACGGGTGGCTGGAGGGTTGGCACAATCTTCTTCCAGTTCAGGGATTTTCTTCCAAGCAGATGGGCACTCCCAGGCTGTTATTAATTCGCACTTGAGCTCATCTTTTGGTAACTCATCTACTTCAGTCCCTGGAACTGCAAGATCAAATTTGGTTCCAGTTTCGGGGGATGGGAATAATACAGTTTTAAATAGTGTGGCGAACTCTGGTCCAAGTGTTGGGGCAAGTTCTTTAGTTACAGATGCAAACTCAGCATTTTCAGGTGGGGCCCATCTTCAGAGAAGTGCTAGCATCAATAACGAGTCGTATATGCGGTTGCCCGCATCGCCTTTGTCATTCTCATCTAATAATCTTAGTATTTCCGGATCATCAGTTATGGATGGCTCTTCTGTGGTGCAACAAAATTCACAACAAGACCATAATTCCCAACAAATTCAACAGAACCAACTGCAGTCGCAGCAAGGTGCATCAAGTGCAACATCATTGCCAACATCACAACCCGGCCAAGTTTCACTTCCTCTTGGTGCACGACTCTCTGGGTCTTTTGTTTCAGATACTGGTAATTTTTCTCAGGTGCAGAAGAAACCACGGTTGGATACAAAGCAGGAAGATAGTCTGCCACAGCAGGTATTGCAGCAGCTATTTCAGAGGCAAGACTCCTTGCAGTTACAAGGACGCAATCCTCAATTGCAGGCTCTGTTACAACAACAAAGATTACGCCAACAACAGCAGATTTTGCAGTCTATGCCACAGTTGCAGAGAGCTCAGTTACAGCAGCAGCAGCAAATGCAGTTGAGGCAGCAGTTGCAACAGCAGGCAATGCAGCCTAGTTCTCCAATGAAACGTGATGGTGCTGTATGTTCTCGTCGGCTGATGCAGTATTTATATCATCAACGACAAAGGCCTCCTGACAATAGCATTGCCTATTGGAGAAAGTTTGTAACAGAGTATTACTCGCCACGCGCAAAGAAACGATGGTGCTTATCATTGTATGATAATGTTGGCCATCATGCACTTGGTGTTTTTCCTCAGGCAGCTATGGACGCATGGCAATGTGACATCTGTGGATCTAAATCGGGAAGAGGATTTGAAGCTACCTATGAAGTACTTCCTAGACTAAATGAGATCAAATTTGGCAGTGGAGTCATCGATGAGCTTCTGTTTTTGGATTTGCCCCGTGAATGTAGATTTAATTCCGGAATTATGATGTTGGAGTACGGAAGAGCTGTTCAAGAGAGTGTTTATGAGCAACTTCGCGTTGTCCGTGAGGGCCAGCTTCGTATCATATTCACTAATGAATTAAAGATATTATCATGGGAGTTTTGTGCTCGGCGCCATGAGGAACTCCTTCCTCGTAGGTTGGTTGCACCACAGGTGAATCAGTTAGTCCAGGTAGCTCAAAAATGCCAGAGTACAATTTCTGAAGGCGGATCAGATGGGGTGTCACAGAAAGATTTACAAGCTAACAGCAATATGGTGCTGACAGCCGGCCGTCAACTGGCAAAGAGTTTGGAGTTGCAATCACTTAACGACTTGGGTTTCTCTAAAAGATATGTGAGGTGTTTGCAGATATCAGAAGTTGTCAATAGCATGAAAGATCTTGTCGATTTCTCCCGTGAGCACAAAATTGGGCCTATTGAGGGGTTGAAAAATTATCCTCGCCATGCTGCCGCAGCCAAACTACAGATTAAAAAAATGCAAGAGATGGAGCAGTTAGCAAGTGTTCAGGGTCTGCCCACTGACCGCAATACTCTTAATAAGTTAATGGCAATGCAGCCAAGTCTCAACAATCAAGTTAATAGCAACCATCAAATGGTCGGCCGAGGAGCTTTGAGTGGCTCTGCCCAAGCTGCTTTGGCGCTCAGCACATACCAAAATATACTCATGAGACAGCACTCAATGAACTCAAATCCTAGTTCGCATCAACAGGAGGCGTCATCTTCCTTCAACAATTCTAATCAGATTCCATCCTCTAGCTTCCAAAGTAATGCCTCTTTGATCCCCGGCTCTATGCAGAACTCTCCGGCCAGTGGCTTTTCAATCCCGAACCTGCCTCCACCGCAGTCTCAGCTGCATGTTCTCACGCAAAGGTCCCTGAGCTCTAATAGCCTCCTTCAACAAACCCATCCTCAGGGTCAGGGCAATCAAGCTTTACAGCATCAGATGATCCAGCAGTTTTTACAGATGTCTAATACTGGATCTGGGCCAAACCCGAGTGGCAATATGATTAGAAGTGGCATCGGATATGGCAGAAGCCCTTCCCTGTCAGCTCCAGCCACTAGCAATCTACCGGGAAGTAATGGCCCTGGGCTGGCTCCGAGTCGTAGCGACAGTTTCAAAGGTGTTTCGATCAGTAACTCGTCCGCAGGCAGTGGAAATAACGGATTCAGTCAGAGGACACCGGATTTGTCATCCGATCTTCATTTGCAACAAGGTATGATGTACGACATAGACAATGATTTCTCGGATAATGGGTTTTTTAACAGTGATTTTGATGATGCTATGGATTATGTCTGGAAGGCTTGA | 2535 | 45.76 | MAPSRVAGGLAQSSSSSGIFFQADGHSQAVINSHLSSSFGNSSTSVPGTARSNLVPVSGDGNNTVLNSVANSGPSVGASSLVTDANSAFSGGAHLQRSASINNESYMRLPASPLSFSSNNLSISGSSVMDGSSVVQQNSQQDHNSQQIQQNQLQSQQGASSATSLPTSQPGQVSLPLGARLSGSFVSDTGNFSQVQKKPRLDTKQEDSLPQQVLQQLFQRQDSLQLQGRNPQLQALLQQQRLRQQQQILQSMPQLQRAQLQQQQQMQLRQQLQQQAMQPSSPMKRDGAVCSRRLMQYLYHQRQRPPDNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRECRFNSGIMMLEYGRAVQESVYEQLRVVREGQLRIIFTNELKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTISEGGSDGVSQKDLQANSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLVDFSREHKIGPIEGLKNYPRHAAAAKLQIKKMQEMEQLASVQGLPTDRNTLNKLMAMQPSLNNQVNSNHQMVGRGALSGSAQAALALSTYQNILMRQHSMNSNPSSHQQEASSSFNNSNQIPSSSFQSNASLIPGSMQNSPASGFSIPNLPPPQSQLHVLTQRSLSSNSLLQQTHPQGQGNQALQHQMIQQFLQMSNTGSGPNPSGNMIRSGIGYGRSPSLSAPATSNLPGSNGPGLAPSRSDSFKGVSISNSSAGSGNNGFSQRTPDLSSDLHLQQGMMYDIDNDFSDNGFFNSDFDDAMDYVWKA | 844 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 42267747 | 42272537 | + | Bma005256.1 | Bma10g01195 | 90258 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g01195 | 844 | MobiDBLite | consensus disorder prediction | 732 | 806 | - | - | |
Bma10g01195 | 844 | MobiDBLite | consensus disorder prediction | 188 | 208 | - | - | |
Bma10g01195 | 844 | Coils | Coil | 255 | 275 | - | - | |
Bma10g01195 | 844 | Pfam | LIM-domain binding protein | 293 | 553 | IPR029005 | - | |
Bma10g01195 | 844 | PANTHER | LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED | 5 | 151 | - | - | |
Bma10g01195 | 844 | MobiDBLite | consensus disorder prediction | 636 | 694 | - | - | |
Bma10g01195 | 844 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 5 | 151 | IPR029005 | - | |
Bma10g01195 | 844 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 188 | 837 | IPR029005 | - | |
Bma10g01195 | 844 | MobiDBLite | consensus disorder prediction | 127 | 176 | - | - | |
Bma10g01195 | 844 | PANTHER | LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED | 188 | 837 | - | - | |
Bma10g01195 | 844 | MobiDBLite | consensus disorder prediction | 127 | 175 | - | - | |
Bma10g01195 | 844 | MobiDBLite | consensus disorder prediction | 757 | 806 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma10g01195 | Bma14g02063 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00876 | Bma-Chr1:8235440 | Bma10g01195 | Bma-Chr10:42267747 | 3.87E-106 | transposed | |
Bma10g01195 | Bma-Chr10:42267747 | Bma14g02063 | Bma-Chr14:43958795 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g01195 | - | - | pper:18787712 | 1097.03 |