Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01195 ATGGCGCCTTCACGGGTGGCTGGAGGGTTGGCACAATCTTCTTCCAGTTCAGGGATTTTCTTCCAAGCAGATGGGCACTCCCAGGCTGTTATTAATTCGCACTTGAGCTCATCTTTTGGTAACTCATCTACTTCAGTCCCTGGAACTGCAAGATCAAATTTGGTTCCAGTTTCGGGGGATGGGAATAATACAGTTTTAAATAGTGTGGCGAACTCTGGTCCAAGTGTTGGGGCAAGTTCTTTAGTTACAGATGCAAACTCAGCATTTTCAGGTGGGGCCCATCTTCAGAGAAGTGCTAGCATCAATAACGAGTCGTATATGCGGTTGCCCGCATCGCCTTTGTCATTCTCATCTAATAATCTTAGTATTTCCGGATCATCAGTTATGGATGGCTCTTCTGTGGTGCAACAAAATTCACAACAAGACCATAATTCCCAACAAATTCAACAGAACCAACTGCAGTCGCAGCAAGGTGCATCAAGTGCAACATCATTGCCAACATCACAACCCGGCCAAGTTTCACTTCCTCTTGGTGCACGACTCTCTGGGTCTTTTGTTTCAGATACTGGTAATTTTTCTCAGGTGCAGAAGAAACCACGGTTGGATACAAAGCAGGAAGATAGTCTGCCACAGCAGGTATTGCAGCAGCTATTTCAGAGGCAAGACTCCTTGCAGTTACAAGGACGCAATCCTCAATTGCAGGCTCTGTTACAACAACAAAGATTACGCCAACAACAGCAGATTTTGCAGTCTATGCCACAGTTGCAGAGAGCTCAGTTACAGCAGCAGCAGCAAATGCAGTTGAGGCAGCAGTTGCAACAGCAGGCAATGCAGCCTAGTTCTCCAATGAAACGTGATGGTGCTGTATGTTCTCGTCGGCTGATGCAGTATTTATATCATCAACGACAAAGGCCTCCTGACAATAGCATTGCCTATTGGAGAAAGTTTGTAACAGAGTATTACTCGCCACGCGCAAAGAAACGATGGTGCTTATCATTGTATGATAATGTTGGCCATCATGCACTTGGTGTTTTTCCTCAGGCAGCTATGGACGCATGGCAATGTGACATCTGTGGATCTAAATCGGGAAGAGGATTTGAAGCTACCTATGAAGTACTTCCTAGACTAAATGAGATCAAATTTGGCAGTGGAGTCATCGATGAGCTTCTGTTTTTGGATTTGCCCCGTGAATGTAGATTTAATTCCGGAATTATGATGTTGGAGTACGGAAGAGCTGTTCAAGAGAGTGTTTATGAGCAACTTCGCGTTGTCCGTGAGGGCCAGCTTCGTATCATATTCACTAATGAATTAAAGATATTATCATGGGAGTTTTGTGCTCGGCGCCATGAGGAACTCCTTCCTCGTAGGTTGGTTGCACCACAGGTGAATCAGTTAGTCCAGGTAGCTCAAAAATGCCAGAGTACAATTTCTGAAGGCGGATCAGATGGGGTGTCACAGAAAGATTTACAAGCTAACAGCAATATGGTGCTGACAGCCGGCCGTCAACTGGCAAAGAGTTTGGAGTTGCAATCACTTAACGACTTGGGTTTCTCTAAAAGATATGTGAGGTGTTTGCAGATATCAGAAGTTGTCAATAGCATGAAAGATCTTGTCGATTTCTCCCGTGAGCACAAAATTGGGCCTATTGAGGGGTTGAAAAATTATCCTCGCCATGCTGCCGCAGCCAAACTACAGATTAAAAAAATGCAAGAGATGGAGCAGTTAGCAAGTGTTCAGGGTCTGCCCACTGACCGCAATACTCTTAATAAGTTAATGGCAATGCAGCCAAGTCTCAACAATCAAGTTAATAGCAACCATCAAATGGTCGGCCGAGGAGCTTTGAGTGGCTCTGCCCAAGCTGCTTTGGCGCTCAGCACATACCAAAATATACTCATGAGACAGCACTCAATGAACTCAAATCCTAGTTCGCATCAACAGGAGGCGTCATCTTCCTTCAACAATTCTAATCAGATTCCATCCTCTAGCTTCCAAAGTAATGCCTCTTTGATCCCCGGCTCTATGCAGAACTCTCCGGCCAGTGGCTTTTCAATCCCGAACCTGCCTCCACCGCAGTCTCAGCTGCATGTTCTCACGCAAAGGTCCCTGAGCTCTAATAGCCTCCTTCAACAAACCCATCCTCAGGGTCAGGGCAATCAAGCTTTACAGCATCAGATGATCCAGCAGTTTTTACAGATGTCTAATACTGGATCTGGGCCAAACCCGAGTGGCAATATGATTAGAAGTGGCATCGGATATGGCAGAAGCCCTTCCCTGTCAGCTCCAGCCACTAGCAATCTACCGGGAAGTAATGGCCCTGGGCTGGCTCCGAGTCGTAGCGACAGTTTCAAAGGTGTTTCGATCAGTAACTCGTCCGCAGGCAGTGGAAATAACGGATTCAGTCAGAGGACACCGGATTTGTCATCCGATCTTCATTTGCAACAAGGTATGATGTACGACATAGACAATGATTTCTCGGATAATGGGTTTTTTAACAGTGATTTTGATGATGCTATGGATTATGTCTGGAAGGCTTGA 2535 45.76 MAPSRVAGGLAQSSSSSGIFFQADGHSQAVINSHLSSSFGNSSTSVPGTARSNLVPVSGDGNNTVLNSVANSGPSVGASSLVTDANSAFSGGAHLQRSASINNESYMRLPASPLSFSSNNLSISGSSVMDGSSVVQQNSQQDHNSQQIQQNQLQSQQGASSATSLPTSQPGQVSLPLGARLSGSFVSDTGNFSQVQKKPRLDTKQEDSLPQQVLQQLFQRQDSLQLQGRNPQLQALLQQQRLRQQQQILQSMPQLQRAQLQQQQQMQLRQQLQQQAMQPSSPMKRDGAVCSRRLMQYLYHQRQRPPDNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRECRFNSGIMMLEYGRAVQESVYEQLRVVREGQLRIIFTNELKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTISEGGSDGVSQKDLQANSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLVDFSREHKIGPIEGLKNYPRHAAAAKLQIKKMQEMEQLASVQGLPTDRNTLNKLMAMQPSLNNQVNSNHQMVGRGALSGSAQAALALSTYQNILMRQHSMNSNPSSHQQEASSSFNNSNQIPSSSFQSNASLIPGSMQNSPASGFSIPNLPPPQSQLHVLTQRSLSSNSLLQQTHPQGQGNQALQHQMIQQFLQMSNTGSGPNPSGNMIRSGIGYGRSPSLSAPATSNLPGSNGPGLAPSRSDSFKGVSISNSSAGSGNNGFSQRTPDLSSDLHLQQGMMYDIDNDFSDNGFFNSDFDDAMDYVWKA 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42267747 42272537 + Bma005256.1 Bma10g01195 90258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01195 844 MobiDBLite consensus disorder prediction 732 806 - -
Bma10g01195 844 MobiDBLite consensus disorder prediction 188 208 - -
Bma10g01195 844 Coils Coil 255 275 - -
Bma10g01195 844 Pfam LIM-domain binding protein 293 553 IPR029005 -
Bma10g01195 844 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
Bma10g01195 844 MobiDBLite consensus disorder prediction 636 694 - -
Bma10g01195 844 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Bma10g01195 844 PANTHER LIM DOMAIN-BINDING PROTEIN 188 837 IPR029005 -
Bma10g01195 844 MobiDBLite consensus disorder prediction 127 176 - -
Bma10g01195 844 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 188 837 - -
Bma10g01195 844 MobiDBLite consensus disorder prediction 127 175 - -
Bma10g01195 844 MobiDBLite consensus disorder prediction 757 806 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g01195 Bma14g02063 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00876 Bma-Chr1:8235440 Bma10g01195 Bma-Chr10:42267747 3.87E-106 transposed
Bma10g01195 Bma-Chr10:42267747 Bma14g02063 Bma-Chr14:43958795 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01195 - - pper:18787712 1097.03