Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01197 ATGGATGATGACCGCCCATCTGACACCTACATTTGGGCAAACTCATCTGCGCTCTCAATGACAACCTACATTCGTAAAAACTCATCTGCGCTCTCAATCACAACCAATCCTGAACTATATAGAACTGCTCGGGTTTCTGCACTCTCTCTTACTTATTATGGGTATTGTCTTGGAAATGGACCCTACACTGTTAACCTCCACTTTGCAGAGATAATGTTTACTAATGATAAGAAATTTAGCGATCTTGGTAGGCGCATATTTGATGTTTACATTCAGGGAACGCTGGTGCGGGAGAATTTTGATATTGCAAGAGAAGCAGGTGGGGTTGGCATGGCTGTGGTGAAAAATTTTCCCGTCATTATTACAGATGGTACCCTGGAAATTCGTTTCTATTGGGCGGGAAAGGGGACAAATGCTATTCCACAAAGAGGAGTCTATGGCCCTCTAATTTCAGCCATTTCCGTAGATCCTGACTTTGAGCCTCCAGCGCAGCCTCCAGTGCAGCCTCCAGCGCAAGCACGAGTAGATAACAGTAGCATGGCAGCCGGGGTTGTTGTTGGAATTGTAGCTGCAGTGCTAGTCATGATATTGCTGATTCTAGGAATCTTGTGGTGGAAAGGCTGTATTGGCAAGAAAAAAACAATGGACGAAGATCTAAGAGGTTTAGATCTTCAAACTGGTTCGTTTACCTTGCGGCAAATACGAGCTGCCACTAACAACTTTGATTCAGCTTATAAGATTGGCGAGGGTGGTTTTGGTCCTGTTTACAAGGGTCTTCTAGCGGACGGGACCATAATAGCAGTGAAACAGCTTTCGTCAAAATCAAAGCAAGGAAATCGAGAGTTTATTAATGAGATTGGCATGATATCTGCTCTGCAGCACCCAAATCTCGTTAAGCTTTATGGATGTTGCATGGAAGGAAATCAATTACTGTTAATATACGAGTACATGGAGAATAACAGCCTTGCTCGAGCTCTATTCGGCTCTGAAGAACACCAATTGAAACTGGATTGGCGGACAAGATACAATATTTGTATTGGTATTGCAAGAGGTTTGGCTTATCTTCATGAAGAGTCGAGATTGAAGATCGTTCATCGAGACATTAAGGCAACCAATGTTTTGCTCGATAAAAATCTTGAACCAAAAATTTCTGACTTTGGATTGGCTAAGCTTGACGAAGAAGGAAATACACACATTAGCACTCGAGTCGCCGGAACCTTCGGATATATGGCACCGGAGTATGCAATGAGAGGCTATTTGACTGATAAAGCAGATGTGTATAGCTTTGGTATCGTGGCCCTGGAAATTGTCAGTGGAAGAAGCAACACATGTTACCTGCCGAAAGAGGAATGCTTGTACCTTCTTGATTGGGCTCTTATTTTAAACGAGAAATCAAGTCTGCTTCACCTAGTCGACGAAAGATTAGGATCAGACTTCGACAAAAAAGAGGCAATGGTGATGGCCAATCTGGGTCTCCAATGCACTAACGTTTCTCCAGCAGTGAGGCCATTGATGTCGAACGTTGTGAGCATGCTTGAAGGTAGAGTCCTTCCCAAGGAAACGGTTCCCGATCCCAATGCCTCAAAAGAAGCCATGAAAGCAATGTGGAGACAGTATCAGCGCGACAAAGAGAGCTGCACAAATGATAGTCAGAGTCAGAGCGTATCTTTGGATACACCATGGACTAGTTCTTCAGCATCTGCTGTAGATCTCTATCCAATCAACATGGATTCTGCCTACTTGATTAACCAGGAGTAA 1758 43.74 MDDDRPSDTYIWANSSALSMTTYIRKNSSALSITTNPELYRTARVSALSLTYYGYCLGNGPYTVNLHFAEIMFTNDKKFSDLGRRIFDVYIQGTLVRENFDIAREAGGVGMAVVKNFPVIITDGTLEIRFYWAGKGTNAIPQRGVYGPLISAISVDPDFEPPAQPPVQPPAQARVDNSSMAAGVVVGIVAAVLVMILLILGILWWKGCIGKKKTMDEDLRGLDLQTGSFTLRQIRAATNNFDSAYKIGEGGFGPVYKGLLADGTIIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCMEGNQLLLIYEYMENNSLARALFGSEEHQLKLDWRTRYNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLEPKISDFGLAKLDEEGNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTCYLPKEECLYLLDWALILNEKSSLLHLVDERLGSDFDKKEAMVMANLGLQCTNVSPAVRPLMSNVVSMLEGRVLPKETVPDPNASKEAMKAMWRQYQRDKESCTNDSQSQSVSLDTPWTSSSASAVDLYPINMDSAYLINQE 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42494915 42498515 - Bma005262.1 Bma10g01197 90260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01197 585 MobiDBLite consensus disorder prediction 542 563 - -
Bma10g01197 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Bma10g01197 585 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 554 - -
Bma10g01197 585 Gene3D Phosphorylase Kinase; domain 1 209 316 - -
Bma10g01197 585 Pfam Protein tyrosine and serine/threonine kinase 245 512 IPR001245 GO:0004672|GO:0006468
Bma10g01197 585 SUPERFAMILY Protein kinase-like (PK-like) 227 513 IPR011009 -
Bma10g01197 585 SMART serkin_6 241 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g01197 585 CDD STKc_IRAK 247 514 - -
Bma10g01197 585 Pfam Malectin domain 26 153 IPR021720 -
Bma10g01197 585 ProSiteProfiles Protein kinase domain profile. 241 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g01197 585 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 554 - -
Bma10g01197 585 MobiDBLite consensus disorder prediction 545 563 - -
Bma10g01197 585 Gene3D Transferase(Phosphotransferase) domain 1 317 522 - -
Bma10g01197 585 Gene3D - 2 157 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00458 Bma-Chr10:5156089 Bma10g01197 Bma-Chr10:42494915 0 dispersed
Bma10g00460 Bma-Chr10:5186200 Bma10g01197 Bma-Chr10:42494915 0 dispersed
Bma10g01197 Bma-Chr10:42494915 Bma13g00923 Bma-Chr13:39663759 0 dispersed
Bma10g01197 Bma-Chr10:42494915 Bma10g01199 Bma-Chr10:42539523 6.62E-45 proximal
Bma10g01197 Bma-Chr10:42494915 Bma10g01200 Bma-Chr10:42553032 4.62E-113 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66757 PF07714 PK_Tyr_Ser-Thr 2.10E-48 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01197 - - jre:109011992 781.941