Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g01198 | ATGATGGTTCTACTTCATGCATATGTGGAAAATGATGCCATGGTTCTGTTTCAAATATACGTGCAGGGATTTAAACCTGTTGAAAGAATAGATCTTGTTGGTGGGTTGCCAGCGGCTGCCTCCTCATCTCAGCATCACAGTCCATATGCTTCCTTCATTCCGAGCCCCAGTTCTTCCTCTTTTCCTAGTCCAGTCTCATCTTCGTATACTGCTGCTAATCCTACAACGGATGGAAATTCCCTCATCCCTTGGCTTAAAAATCTTTCATCTGCCTCATCATCAGCCTCCTCTTCCAAGCGCCCCCACCTCTATATCCATGGAGGCTCTGTCAGTGCTCCAGTTACCCCACCTTTGAGCTCACCAAGTGCCAAAACACCCCGAATTAGAGCCAATTGGGAAGAACAAACAACATCCCCTGGTTGGACTGCTCGACAATACTCGATCCTACCATCTTCTACTCTACCAAGCCCTCCGTCTTCTACTCCACCAAGCCCTGGCCGCCAGATTTTTCCGGATCCAGAATGGTTTTCTGGAATTAGAATTCCTTACAGCGGACCAACTTCTCCAACGTTCAGCCTTGTCTCTTCTAACCCATTTGGCTTTAAGGAAGAGGCGTTAACTGGTGGTGGATCGCGCATGTGGACTCCCGGGCAAAGTGGGACATGCTCTCCGGCCATTGCAGCAGGCTCTGATCACACTGCAGACATTCCGATGTCTGAACTTATTTCAGATGAGTTTGCATTTGGAAGCAATGCAGCTGGAATAGTTAAGCCTTGGGAAGGAGAGAGGATCCATGAAGATTCTGGATCAGATGATCTCGAGCTGACCCTTGGGAGTTCAAGGACAAGGTGA | 852 | 48.47 | MMVLLHAYVENDAMVLFQIYVQGFKPVERIDLVGGLPAAASSSQHHSPYASFIPSPSSSSFPSPVSSSYTAANPTTDGNSLIPWLKNLSSASSSASSSKRPHLYIHGGSVSAPVTPPLSSPSAKTPRIRANWEEQTTSPGWTARQYSILPSSTLPSPPSSTPPSPGRQIFPDPEWFSGIRIPYSGPTSPTFSLVSSNPFGFKEEALTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSELISDEFAFGSNAAGIVKPWEGERIHEDSGSDDLELTLGSSRTR | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 42537550 | 42538490 | - | Bma005263.1 | Bma10g01198 | 90261 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g01198 | 283 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 4 | 23 | 157 | - | - | |
Bma10g01198 | 283 | MobiDBLite | consensus disorder prediction | 113 | 154 | - | - | |
Bma10g01198 | 283 | MobiDBLite | consensus disorder prediction | 108 | 168 | - | - | |
Bma10g01198 | 283 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 20 | 89 | IPR008540 | - | |
Bma10g01198 | 283 | MobiDBLite | consensus disorder prediction | 263 | 283 | - | - | |
Bma10g01198 | 283 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 4 | 158 | 283 | - | - | |
Bma10g01198 | 283 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 23 | 157 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
Bma10g01198 | 283 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 158 | 283 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma10g01198 | Bma-Chr10:42537550 | Bma13g00924 | Bma-Chr13:39682631 | 2.35E-126 | dispersed | |
Bma10g01198 | Bma-Chr10:42537550 | Bma10g00457 | Bma-Chr10:5150979 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57978 | PF05687 | BES1_N | 4.90E-07 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g01198 | - | - | tcc:18594295 | 390.578 |