Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01198 ATGATGGTTCTACTTCATGCATATGTGGAAAATGATGCCATGGTTCTGTTTCAAATATACGTGCAGGGATTTAAACCTGTTGAAAGAATAGATCTTGTTGGTGGGTTGCCAGCGGCTGCCTCCTCATCTCAGCATCACAGTCCATATGCTTCCTTCATTCCGAGCCCCAGTTCTTCCTCTTTTCCTAGTCCAGTCTCATCTTCGTATACTGCTGCTAATCCTACAACGGATGGAAATTCCCTCATCCCTTGGCTTAAAAATCTTTCATCTGCCTCATCATCAGCCTCCTCTTCCAAGCGCCCCCACCTCTATATCCATGGAGGCTCTGTCAGTGCTCCAGTTACCCCACCTTTGAGCTCACCAAGTGCCAAAACACCCCGAATTAGAGCCAATTGGGAAGAACAAACAACATCCCCTGGTTGGACTGCTCGACAATACTCGATCCTACCATCTTCTACTCTACCAAGCCCTCCGTCTTCTACTCCACCAAGCCCTGGCCGCCAGATTTTTCCGGATCCAGAATGGTTTTCTGGAATTAGAATTCCTTACAGCGGACCAACTTCTCCAACGTTCAGCCTTGTCTCTTCTAACCCATTTGGCTTTAAGGAAGAGGCGTTAACTGGTGGTGGATCGCGCATGTGGACTCCCGGGCAAAGTGGGACATGCTCTCCGGCCATTGCAGCAGGCTCTGATCACACTGCAGACATTCCGATGTCTGAACTTATTTCAGATGAGTTTGCATTTGGAAGCAATGCAGCTGGAATAGTTAAGCCTTGGGAAGGAGAGAGGATCCATGAAGATTCTGGATCAGATGATCTCGAGCTGACCCTTGGGAGTTCAAGGACAAGGTGA 852 48.47 MMVLLHAYVENDAMVLFQIYVQGFKPVERIDLVGGLPAAASSSQHHSPYASFIPSPSSSSFPSPVSSSYTAANPTTDGNSLIPWLKNLSSASSSASSSKRPHLYIHGGSVSAPVTPPLSSPSAKTPRIRANWEEQTTSPGWTARQYSILPSSTLPSPPSSTPPSPGRQIFPDPEWFSGIRIPYSGPTSPTFSLVSSNPFGFKEEALTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSELISDEFAFGSNAAGIVKPWEGERIHEDSGSDDLELTLGSSRTR 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42537550 42538490 - Bma005263.1 Bma10g01198 90261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01198 283 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 23 157 - -
Bma10g01198 283 MobiDBLite consensus disorder prediction 113 154 - -
Bma10g01198 283 MobiDBLite consensus disorder prediction 108 168 - -
Bma10g01198 283 Pfam BES1/BZR1 plant transcription factor, N-terminal 20 89 IPR008540 -
Bma10g01198 283 MobiDBLite consensus disorder prediction 263 283 - -
Bma10g01198 283 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 158 283 - -
Bma10g01198 283 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 23 157 IPR033264 GO:0003700|GO:0006351|GO:0009742
Bma10g01198 283 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 158 283 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g01198 Bma-Chr10:42537550 Bma13g00924 Bma-Chr13:39682631 2.35E-126 dispersed
Bma10g01198 Bma-Chr10:42537550 Bma10g00457 Bma-Chr10:5150979 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57978 PF05687 BES1_N 4.90E-07 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01198 - - tcc:18594295 390.578