Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01199 ATGAGGAGGTCCCTCGTTATAAAGAAGGGACCTCACACTCTGTCCTTATTCTTTCATCGTTTTATAGTCCTATTTCCTTGTTTATTTGATAAGATTTACCTGATCAAGATCACTCCAAGCATTTTTCTTTGGAGCGGAAGAATAATGGGATTCGTGTATGCAGCCTTCAAAATCGTTTATGTTCTGGTGCTCGGATGCCTTGTTTTGAGTTGCTTCAGTATTCTTGGGTCCGACGCGAGACTTTTGCCTCAAGAAGAAGTTGAAGCCCTTCAAGCAATATCTTCAAAGTTGGAGAACTTGAATTGGGCAGTCACCCAAAGTTCCTGTGATACGGGGGAAGGCTTTTTAAATAGAGTGATTGACGGAAATCAAATAATGAGTAATGTCTCATGCAGTTGTCCTTCCACTGTTTGCCATGTTACCTCCATCTGGCTGAAGGGTCTCAATTTATCCGGTATTCTACCATCAGAATTTGGCAGCCTCACACATCTACAGGAACTTGACCTTGCTAGAAACTACATAAATGGATCAATTCCAACAAGTTTTGTTCAGATCCCTCTTGTTAAACTTACCATCTTAGGTAACCGGCTTAGTGGTTCAATTCCTGACCATGTTGGTAATATGACTTTACTAGAAGAGCTGGTCTTGGAGGACAACGAACTGTCTGGAAGTCTTCCAGAAAATCTCGGAAATTTGAGTCGCTTGAGGAGATTACTTCTATCTGCTAACAATTTCACAGGAACAATTCCTGAGTCATATGGAAATTTGAAGAACTTGACTGATTTTAGGATAGATGGGAGTAATATGACAGGAAAGATACCTGAATTTATTGGAAATTGGACCGAGATAACCAGATTGGATTTGCAAGGAACATCAATGGATAATCCCATTCCTTCAACAATATCCCTTTTGACAAAGATGAAAGAATTGCGGATATCGGATTTGAATGGACCATTTACAGGATTCCCAAATTTAACTGGAATGATGAATATGAAAGAATTGATCCTGAGAAACTGTCTCATCAATGATACAATTCCTCCATATATTGGAGCAATGAATAATCTCAAAGTCTTAGACTTGAGCTTTAACAAGTTGACTGGTTCGATTCCCCAAACATTCCAGAATCTATCAAGCCACATCGATTACATCTTTTTGACCAACAACTCACTGACTGGAGAAGTGCCAAGTTGGACTTCGAGTAACAAGAACAAAATAGATCTATCTTACAACAATTTCACAGGGGCAATGCGATCTAGTTGCCAAATGTCAACTCAGAATTTAGTTTCCAGTTATTTGCCATCAGCAAACGAAGAAGTATCTTGGTGCTTACAGAAAGATCTTCCATGCTCTGGAAACGCTGAATATCATTCGTTGTTTATCAATTGTGGAGGAAGAAGAGTTGAAATTGATGGCAATCAATATGAAGAGGACTTGTTTAGTGAAGGCAGATCAAACTTTTATTCAGTTGGAGAAAGGTGGGGTTACAGCAGTACAGGGATGTTCATGGGTAAGGAGGATGTTCCTAACTTAGCAGAGAATACCTTTGGTCTGAACTTGAGTGGGGCGAGCTTCTATGAGACAGCTCGACTGTCCGCACTTTCACTTAAGTACTATGGCCTTTGCCTTCGAAAGGGGAGTTATAATGTCAAGCTGCATTTTGCTGAAATAATGTATTCTGATGACCGGAACTTTAGTAGTCTGGGGAGGCGTATATTTGATGTCTCAGTTCAAGGAAATTTAGTTTTAAAGGACTTTAATATTGCGGAAAAAGCTGGAGGAGTTGGTAAAGGCTACACTTACGAAAATACAGATGTTATCGTTAATGGTAGCACTCTAGAGATCCACTTATACTGGGCTGGTAAAGGAACTACTGCTATTCCAGATAGAGGAGTTTACGGACCTCTTATATCTGCTATCACAGTAACACCAAACTTTGAGGTTGGGACAGGAGGCTTATCCGCTGGAGCTATTGCTGGCATTGTGATTGCTTCATGTGTGCTAGTCATATTGGTACTTGTTGTCCTTTGGATCAAAGGTTATATATGTGCAAAATGTTGA 2058 39.94 MRRSLVIKKGPHTLSLFFHRFIVLFPCLFDKIYLIKITPSIFLWSGRIMGFVYAAFKIVYVLVLGCLVLSCFSILGSDARLLPQEEVEALQAISSKLENLNWAVTQSSCDTGEGFLNRVIDGNQIMSNVSCSCPSTVCHVTSIWLKGLNLSGILPSEFGSLTHLQELDLARNYINGSIPTSFVQIPLVKLTILGNRLSGSIPDHVGNMTLLEELVLEDNELSGSLPENLGNLSRLRRLLLSANNFTGTIPESYGNLKNLTDFRIDGSNMTGKIPEFIGNWTEITRLDLQGTSMDNPIPSTISLLTKMKELRISDLNGPFTGFPNLTGMMNMKELILRNCLINDTIPPYIGAMNNLKVLDLSFNKLTGSIPQTFQNLSSHIDYIFLTNNSLTGEVPSWTSSNKNKIDLSYNNFTGAMRSSCQMSTQNLVSSYLPSANEEVSWCLQKDLPCSGNAEYHSLFINCGGRRVEIDGNQYEEDLFSEGRSNFYSVGERWGYSSTGMFMGKEDVPNLAENTFGLNLSGASFYETARLSALSLKYYGLCLRKGSYNVKLHFAEIMYSDDRNFSSLGRRIFDVSVQGNLVLKDFNIAEKAGGVGKGYTYENTDVIVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFEVGTGGLSAGAIAGIVIASCVLVILVLVVLWIKGYICAKC 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42539523 42547642 + Bma005264.1 Bma10g01199 90262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01199 685 Pfam Malectin domain 458 639 IPR021720 -
Bma10g01199 685 SUPERFAMILY L domain-like 130 414 - -
Bma10g01199 685 Gene3D Ribonuclease Inhibitor 84 249 IPR032675 -
Bma10g01199 685 Gene3D Ribonuclease Inhibitor 250 317 IPR032675 -
Bma10g01199 685 PANTHER - 118 603 - -
Bma10g01199 685 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 118 603 - -
Bma10g01199 685 Gene3D - 455 644 - -
Bma10g01199 685 Pfam Leucine rich repeat 330 390 IPR001611 GO:0005515
Bma10g01199 685 SMART LRR_typ_2 161 184 IPR003591 -
Bma10g01199 685 SMART LRR_typ_2 352 375 IPR003591 -
Bma10g01199 685 SMART LRR_typ_2 208 232 IPR003591 -
Bma10g01199 685 Gene3D Ribonuclease Inhibitor 318 432 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g01199 Bma-Chr10:42539523 Bma13g00923 Bma-Chr13:39663759 5.22E-137 dispersed
Bma10g01197 Bma-Chr10:42494915 Bma10g01199 Bma-Chr10:42539523 6.62E-45 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01199 - - csv:101211151 842.802