Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01200 ATGGCGTCTAATCCTAACACAAAAGAGATCATAGACAGTGAATTGCAAGGGCTTGAATTGCAAACGGGTTATTTCTCTTTGAGACAAATCAAATCTGCTACTGGCAACTTCGATCCTAAAAATAAGATTGGTGAAGGCGGCTTTGGACCAGTATACAAGGGAGTTCTTTCAGACGGATCCTTAATTGCTGTCAAGCAACTTTCCTCTAAATCGAAGCAGGGGAATCGTGAATTTGTCACTGAAATAGGCATGATATCTGCTTTGCAGCACCCAAATCTTGTTAGGCTTTATGGGTGTTGCATCGAAGGACATCAGTTGTTGCTAATATATGAATATATGGAAAACAATAGTCTCGCGCGTGCTCTCTTTGATCCCGAGGAACATCGTCTCCACGTAGACTGGGCAACAAGGAAGAAGATATGCATGGGAATAGCGAAGGGATTAGCTTATCTTCACGAGGAATCGAGGTTGAAAATTGTGCACAGAGATATAAAGGCTACAAATGTGCTGCTTGATAAAAATCTAACGGCAAAGATCTCTGACTTTGGCTTGGCGAAGCTTGATGAAGAGGAGAATACCCACATTAGTACTCGGATTGCTGGAACCATGTGA 612 42.32 MASNPNTKEIIDSELQGLELQTGYFSLRQIKSATGNFDPKNKIGEGGFGPVYKGVLSDGSLIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVRLYGCCIEGHQLLLIYEYMENNSLARALFDPEEHRLHVDWATRKKICMGIAKGLAYLHEESRLKIVHRDIKATNVLLDKNLTAKISDFGLAKLDEEENTHISTRIAGTM 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42553032 42554187 + Bma005265.1 Bma10g01200 90263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01200 203 Gene3D Phosphorylase Kinase; domain 1 3 112 - -
Bma10g01200 203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Bma10g01200 203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 202 - -
Bma10g01200 203 SMART serkin_6 37 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g01200 203 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 202 - -
Bma10g01200 203 Gene3D Transferase(Phosphotransferase) domain 1 113 203 - -
Bma10g01200 203 ProSiteProfiles Protein kinase domain profile. 37 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g01200 203 SUPERFAMILY Protein kinase-like (PK-like) 21 202 IPR011009 -
Bma10g01200 203 Pfam Protein kinase domain 39 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g01200 Bma-Chr10:42553032 Bma10g00458 Bma-Chr10:5156089 1.93E-138 dispersed
Bma10g01197 Bma-Chr10:42494915 Bma10g01200 Bma-Chr10:42553032 4.62E-113 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66758 PF00069 Pkinase 2.50E-37 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01200 - - vvi:100243601 351.673