Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01211 ATGGCTTCTCAGGCTGGTTTGAGAGAGAAGAAGGTGAGGAAAATGGTGGATTTCTTGGGTGAAAATGATGGGAAAGTGGTGAAAATTGGGGAGATTGTGTTTGTTAATCTGTTGAACACATTGGGTAATCTTTTTTTCTCCAAGGATTTTGTGGATTTTGGAGATGAAGCAGGAAGTGATTTGAAAAGGATTATGAGGAAATTATTGGAGTTGGGGGCTTATCCAAATGTGTCTGATTTTTATCCTTGTTTGGCTTGGTTGGACATTCAAGGTTTGAGAAGGAATGTTTGCAACCAGTTTGAGGAAATGTGTAGTTTGTGGAAATCTTTGATTAGTGAGAGAAGAAAAGGCCATAGCCATGTGTTTCAAGCTCAGCAAGATTTCTTGGATTCTCTTATTACCAATGGGCTCAGTGATCACCAAATTAACATCTTGGTTTCTGAACTATTTTTGGCAGGAACAGACACTATATCATCGACAGTTGAGTGGGCAATGGCTGAACTACTCAAGAACAGAGCTGCCATGAACAGACTTCAAGAAGAGCTCAAGAGAGAAATCAATGGAAACTCCATGAAAGAATCAGACATTCCCAAGCTTCCTTACTTGCAGGCATGCATCAAGGAAACCCTAAGATTACACCCACCTGCTCCACTTCTTGGTCCACATAGAGCTCTCGAAGATTGTGAGAGCATGGGCTACAAAATCCCAAAAAACACTCGCGTTTTGGTCAACGTTTGGGCAATCGGGCGGGACAGTTCAGTATGGGAAGACCCGTCATCGTTTAAACCAGAAAGATTTCTTCACTCTGATGTAGATTTTGCTGGTAACGATTTTGAATTCTTACCCTTTGGAGCTGGGAGGAGAATTTGCCCCGGAATGCCAATGGCTTCAAAGCAACTTCCACTGATATTAGCTTCCTTGCTTCATTGCTTTGACTGGCATCTCCCAAATGGTGAAGACTGTGCAGAACTAGACATGACTGAGAAGTTTGGCCTAACATTGCACAGGGAACAACCTTTACTAGTCATACCCGAAACTAAATCAAACTCGGGAAAGGTTGAATAG 1065 42.16 MASQAGLREKKVRKMVDFLGENDGKVVKIGEIVFVNLLNTLGNLFFSKDFVDFGDEAGSDLKRIMRKLLELGAYPNVSDFYPCLAWLDIQGLRRNVCNQFEEMCSLWKSLISERRKGHSHVFQAQQDFLDSLITNGLSDHQINILVSELFLAGTDTISSTVEWAMAELLKNRAAMNRLQEELKREINGNSMKESDIPKLPYLQACIKETLRLHPPAPLLGPHRALEDCESMGYKIPKNTRVLVNVWAIGRDSSVWEDPSSFKPERFLHSDVDFAGNDFEFLPFGAGRRICPGMPMASKQLPLILASLLHCFDWHLPNGEDCAELDMTEKFGLTLHREQPLLVIPETKSNSGKVE 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42848468 42850014 + Bma005281.1 Bma10g01211 90274

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01211 354 SUPERFAMILY Cytochrome P450 3 344 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 Gene3D Cytochrome P450 2 351 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS P450 superfamily signature 152 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS P450 superfamily signature 281 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS P450 superfamily signature 204 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 Pfam Cytochrome P450 9 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS E-class P450 group I signature 161 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS E-class P450 group I signature 244 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS E-class P450 group I signature 280 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS E-class P450 group I signature 290 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 PRINTS E-class P450 group I signature 141 158 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g01211 354 Coils Coil 165 185 - -
Bma10g01211 354 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 283 292 IPR017972 GO:0005506|GO:0016705
Bma10g01211 354 PANTHER CYTOCHROME P450 71B11-RELATED 2 345 - -
Bma10g01211 354 PANTHER (S)-N-METHYLCOCLAURINE 3'-HYDROXYLASE ISOZYME 1-LIKE 2 345 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01211 - - - qsu:112033921 446.817
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g01211 Bma-Chr10:42848468 Bma14g00007 Bma-Chr14:76955 1.33E-82 dispersed
Bma10g01211 Bma-Chr10:42848468 Bma12g01137 Bma-Chr12:43748766 5.65E-68 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g606 . Blo15g00156 . . Bpe03g00135 Bpe07g00949 Bma10g01211 . . . . . . . . . . . . . . . . . Cla01g00545 . . . . . . . Cone5ag0838 . . . Csa05g00580 Chy09g00925 . Blo07g00422 Blo09g00081 Bda06g00671 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi09g00589 . . Cme09g01454
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000969 6 2 3 2 3 2 1 3 3 2 3 2 1 1 1 2 2 11 1 3 2 3 2 3 3 3 0 2 4 4 80