Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01213 ATGAATGGAACTAGAAATGGCGCTTTACAATTGATCAAAGCAGAGCTTCAAGTCCTTTCTCCGCTGGTTCCTGTTCGTTCGATTAGGTTCCTCCGCTTCTGCAAGCAACATGCTGATGGTTTGTGGGCCGTGGTCGATGTGTCGATTGATATCAACCAAGAAGCTTCCAATTCTAGCCCATTTTTCAGTTGCAGGAAGCTTCCTTCCGGCTGCATCGTGCAAGATATGCCTAATGGCTACTCAAAGGTGACTTGGGTGGAGCATACTGAATATGATGAGACATATATTCATCAACTCTACCGTCCATTAATAAGCTCCGGATTTGGATTTGGTGCTGAGAGATGGCTCGTTACGCTCCAACGCCAGTGTGAGTGCTTAGCCATTCTCATATCTTCGTCAATCCCGAACGACGATCCAACAGGAGTTTCTTTGGGCGGTCGGAGAAGCATGTTAAAGCTAGCACAACGAATGGTCGATAACTTCTGCTCGGGGGTTTGTGCTTCGAGTCTACATAAGTGGGAAAAACTTCTCGTTAGTAACGTGAGTGAAGACGTGAAGGTGATGATGAGAAAAAGCATGGACGATCCGGGTGAGCCACCCGGTATCGTATTGAGTGCTGCAACCTCGGTTTGGATTGCCATATCAGAGCAGAGAGTGTTTGAATTCTTAAGAGATGATCGGCTTAGGAGCGAATGGGACATTCTATCAAACGGTGGACCAATGCAAGAGATGGTTCACATTGCGAAGGGTCGAGATCGTGCCAATTGCGTCTCTCTTCTTCGTGCAAGTGCGGTCAATGCGAACGAGAGCACAATGTTGATTTTGCAAGAGACATGGTCGGACTCATCCGGGTCTTTGATCGTTTATGCTCCGGTTGACACACCGTCGATCAACTTGGTGATGCACGGGGGAGACTCGGCCTATGTGTCTCTCTTACCATCTGGATTTTCGATTCTTCCTGATGGTCGATCCAACAATTTGGGATCAAACGGCTGTGATGATGGGAGAGGCAATGGAGGTTGCCTACTAACGGTCTCATTTCAAATTCTGGTGAACAATATTCCTACTGCGAAGCTCACCATGGAATCGGTCGAGACCGTAAATAATCTGATTTCGTGCACAATTAAGAAGATCAAAGATGCCCTTCGAGTAACTTGA 1158 47.06 MNGTRNGALQLIKAELQVLSPLVPVRSIRFLRFCKQHADGLWAVVDVSIDINQEASNSSPFFSCRKLPSGCIVQDMPNGYSKVTWVEHTEYDETYIHQLYRPLISSGFGFGAERWLVTLQRQCECLAILISSSIPNDDPTGVSLGGRRSMLKLAQRMVDNFCSGVCASSLHKWEKLLVSNVSEDVKVMMRKSMDDPGEPPGIVLSAATSVWIAISEQRVFEFLRDDRLRSEWDILSNGGPMQEMVHIAKGRDRANCVSLLRASAVNANESTMLILQETWSDSSGSLIVYAPVDTPSINLVMHGGDSAYVSLLPSGFSILPDGRSNNLGSNGCDDGRGNGGCLLTVSFQILVNNIPTAKLTMESVETVNNLISCTIKKIKDALRVT 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42937910 42939540 + Bma005283.1 Bma10g01213 90276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01213 385 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 1 383 - -
Bma10g01213 385 SUPERFAMILY Bet v1-like 152 380 - -
Bma10g01213 385 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 383 IPR042160 -
Bma10g01213 385 CDD START_ArGLABRA2_like 3 124 - -
Bma10g01213 385 ProSiteProfiles START domain profile. 1 128 IPR002913 GO:0008289
Bma10g01213 385 Pfam START domain 6 125 IPR002913 GO:0008289
Bma10g01213 385 SUPERFAMILY Bet v1-like 7 125 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g01213 Bma-Chr10:42937910 Bma02g01044 Bma-Chr2:51980717 0 dispersed
Bma10g01213 Bma-Chr10:42937910 Bma05g00972 Bma-Chr5:48169367 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01213 K09338 - gmx:100783614 590.112