Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01306 ATGGCTTTGCTAAGCCCTCGATTACAGAGATTTCGGCTGACCAAGATCAACTCGTCGTTTGTTTCTTCGTCTTCCTCAAAGAACACGAGCAGACTTCGGTTCCGTGGCAGAGGGCGATGCTGCTCAGCTATAGCCATTGACGCCCCATCTTCGTTGGCTGATGTCAGTGGGATTAGATGGGGTTCGACTAGCCTTCAAGGTCCACGAGATGAAATGGAGGACGACGTTGTTGTTCGTTCCGATGGACTCAACGGCTTCTTGTTTGCAGCCGTGCTAGATGGTCACGGTGGAATCTCTTCCGTCAAGTTTCTCAGGGATGAATTGTACAAAGAGTGTGTAGCAGCTTTACAAGATGGGCTTGTGTTGAGTGGAGACAACTTCAAAGCCATCAAAGAGTCATTAATCAAAGCTTTTGAATATACAGATAAAAAACTGCTAGAATGGCTTGAAACAAAAGGGGAAGAAGATGAATCTGGCGCTACAGCAACTGTTATGCTCATTGGGACGAATGTATTGTTCATTTCACATATTGGCGACTCATCTGTGGTTCTATCCCGTTCTGGAGGAGCTCAAGTGTTGACGAATCCTCACCGTCCTTATGGAAGCAACAATGCCTCGTTGCAAGAAATCCGAAGAGTTAGAGAAGCAGGTGGATGGATTGTCAACGGGAGGATCTGCGGAGATATTGCTGTATCTCGTGCCTTTGGTGACATAAGATTCAAGACAAAGAAAACTGAGATGCTCAGAAAAGGGGTCGAGCAGCGAAGATGGTCTGAAAAGTTTGTTTCTCGAGTACAGTTCAGTAAAGACTTGATCTCTGCTTCGCCAGATATTTTTCAAGTAGCTCTAGGATCAGATGCAGAGTTTATTTTACTAGCATCTGATGGCTTATGGGACTACATAAACAGCTCGGAGGCTGTCAAATTTGTTCGAAACCAGCTTAGACAACACGGCGATGTTCAGGTACAAAACCTGTACGACGACAACTCACGGACGCAAGATAACGTTAGCATTGTGATTGCCGATTTAGGAAGGACCGATTGGAAGAACTTGGCGGTCCAACACCCGAATACAGCATATGAATTAGTCCAAGCTGTTGCTACAGTTGGAATAGTAGGGATTGGAATTTGGATTTCATCCCAACTTCCTTTGTAA 1155 45.28 MALLSPRLQRFRLTKINSSFVSSSSSKNTSRLRFRGRGRCCSAIAIDAPSSLADVSGIRWGSTSLQGPRDEMEDDVVVRSDGLNGFLFAAVLDGHGGISSVKFLRDELYKECVAALQDGLVLSGDNFKAIKESLIKAFEYTDKKLLEWLETKGEEDESGATATVMLIGTNVLFISHIGDSSVVLSRSGGAQVLTNPHRPYGSNNASLQEIRRVREAGGWIVNGRICGDIAVSRAFGDIRFKTKKTEMLRKGVEQRRWSEKFVSRVQFSKDLISASPDIFQVALGSDAEFILLASDGLWDYINSSEAVKFVRNQLRQHGDVQVQNLYDDNSRTQDNVSIVIADLGRTDWKNLAVQHPNTAYELVQAVATVGIVGIGIWISSQLPL 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 46439350 46441925 + Bma005415.1 Bma10g01306 90369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01306 384 ProSiteProfiles PPM-type phosphatase domain profile. 59 343 IPR001932 -
Bma10g01306 384 CDD PP2Cc 58 343 IPR001932 -
Bma10g01306 384 PANTHER PROTEIN PHOSPHATASE 2C 7 380 IPR015655 GO:0004722|GO:0006470
Bma10g01306 384 SMART PP2C_4 49 341 IPR001932 -
Bma10g01306 384 PANTHER PROTEIN PHOSPHATASE 2C 57 7 380 - -
Bma10g01306 384 Gene3D - 58 350 IPR036457 -
Bma10g01306 384 Pfam Protein phosphatase 2C 61 319 IPR001932 -
Bma10g01306 384 SUPERFAMILY PP2C-like 56 344 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g01306 Bma-Chr10:46439350 Bma02g00324 Bma-Chr2:4405883 1.13E-28 dispersed
Bma10g01306 Bma-Chr10:46439350 Bma01g02414 Bma-Chr1:81713453 6.28E-26 transposed
Bma10g01306 Bma-Chr10:46439350 Bma01g01261 Bma-Chr1:17053757 2.30E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01306 K04457 - pvy:116125865 527.709