Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01323 ATGGGTTCAGCGGGCCAAACCCAGATGACTCCCACACGGGTTCCGGATGAAGAAGCAAACCAGTTCGCCATGCAGTTAGCCAGCGCCTCTGTGCTACCCATGGTCCTAAAAGCAGCCATTGAGCTTAACCTTCTGGAGATCATAGCCAGAGCTGGTCCTGGAGCTCTGTTGTCACCCTCAGAAATCGCAGGCCAGCTCCCCACCACTAACCCCGATGCAGCGGTGATGCTGGATCGCATGTTGCGCCTCTTGGCTTCCTACTCCGTTCTTACTTACTCCCTGCGCACCCTCCCTGATGGCAGAGTTGAAAGGCTTTATGGTTTGGCCCCCGTTTGCAAGTTCTTGACCAAGAACGAGGATGGTGTCTCTATCGCCCCGCTTTGTCTCATGAACCAAGACAAAGTTCTCATGGAGAGTTGGTACCACTTGAAAGATGCAGTTCTGGAAGGTGGGATTCCATTCAACAGAGCGTACGGAATGACAGCATTTGACTACCATGGGACGGATCCCAGATTTAACAAGGTTTTCAACAGAGGGATGTCGGATCACTCTACAATCACCATGAAGAAATTGCTGGGGACGTACAAAGGGTTTGAAGGGGTCGGGTCAGTTGTTGATGTTGGTGGGGGGACTGGCGCAGTCCTTAGCATGATCATTTCCAAGTACCCTTCCATCAAAGGCATCAACTTTGATTTGCCTCATGTGATCGAGGATGCTCCGGATTATCCTGGTGTGGAGCACGTTGGAGGCGATATGTTCGTCAGTGTTCCAAAGGGCGATGCCATTTTCATGAAATGGATCTGCCATGACTGGAGTGACCGGCACTGCCTGAAGATTTTGAAGAATTGCTACGAGGCGCTGCCAAGAAAGGGGAAGGTGATAGTGGCGGAGTGCATAGTGCCTGTGGCGCCAGACAGCAGCCTGGCCACGAAGGGAGTGGTCCACATGGACGTCATAATGTTGGCTCACAATCCAGGTGGGAAAGAGAGGACCCAGGAGGAGTTTCAGGCGCTGGCAGAGGGGGCTGGATTTCAAGGCTTCAGAGTGGAGTGTTGCGCTTTCAATACTTATGTGATGGAGTTTGTTAAGAGTGCTTGA 1098 52.09 MGSAGQTQMTPTRVPDEEANQFAMQLASASVLPMVLKAAIELNLLEIIARAGPGALLSPSEIAGQLPTTNPDAAVMLDRMLRLLASYSVLTYSLRTLPDGRVERLYGLAPVCKFLTKNEDGVSIAPLCLMNQDKVLMESWYHLKDAVLEGGIPFNRAYGMTAFDYHGTDPRFNKVFNRGMSDHSTITMKKLLGTYKGFEGVGSVVDVGGGTGAVLSMIISKYPSIKGINFDLPHVIEDAPDYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDRHCLKILKNCYEALPRKGKVIVAECIVPVAPDSSLATKGVVHMDVIMLAHNPGGKERTQEEFQALAEGAGFQGFRVECCAFNTYVMEFVKSA 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 46866691 46868378 - Bma005439.1 Bma10g01323 90386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01323 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 361 IPR029063 -
Bma10g01323 365 PANTHER BNAA10G07270D PROTEIN 1 364 - -
Bma10g01323 365 PIRSF O-mtase 2 363 IPR016461 GO:0008168
Bma10g01323 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Bma10g01323 365 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Bma10g01323 365 Gene3D - 1 115 IPR036388 -
Bma10g01323 365 PANTHER O-METHYLTRANSFERASE 1 364 IPR016461 GO:0008168
Bma10g01323 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Bma10g01323 365 SUPERFAMILY Winged helix DNA-binding domain 16 119 IPR036390 -
Bma10g01323 365 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02543 Bma-Chr1:83113329 Bma10g01323 Bma-Chr10:46866691 3.23E-105 dispersed
Bma05g00542 Bma-Chr5:29493359 Bma10g01323 Bma-Chr10:46866691 6.17E-66 dispersed
Bma05g00546 Bma-Chr5:29819752 Bma10g01323 Bma-Chr10:46866691 7.09E-125 dispersed
Bma10g01323 Bma-Chr10:46866691 Bma13g01111 Bma-Chr13:44121414 2.37E-142 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01323 K13066 - zju:107414981 651.358