Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00002 ATGATGCATCTTGCAGACATCTTTATCATCTTTCTATCACTCGTCTTCCTCTGTTTATGGTGGCGCTACTGGAGTGTCACCGGCGGTGGACCAAAACACCTGCCGCCAGGGCCCCCAGGTTGGCCTCTCGTCGGAAACCTCATCCAGGTAATCCTCCAGCGCCGCCCTTTCATCTTTGTAGTACGTGATTTACGAGCAAAGTATGGACCAATCTTTACTATGCAAATGGGACAGCGAACGCTCGTCATCGTCACTAGCTCCGACCTCATCCATGAGGCTTTAGTTCAGAGAGGGGCGGCTTTCGCAAGTAGGCCGGCTGACTCGCCGATCCGGCTTCTATTCAGTGTTGGGAAGTGTACGGTGAACTCGGCCAAGTACGGTCCACTTTGGAGGACTTTGAGGCGGAACTTCGTCACGGAGCTGGTTAACCCCACTAGAATAAGGCAATGCAGCTGGATAAGAAACTGGGCTCTAGAAAACCATATGAATAGGCTTAAGAAAGAGGCCAAGGAGAAGGGATTCGTAGAGGTGATGAGCAACTGTAGGCTCACTGCTTGTAGCATTCTTATATGCATATGCTTCGGTTGTAAGATGTCAGAACAAGAGATTAAGAAGATTGAGAACATTCTAAAGGATGTAATGCTCATGACAACTCCAAAGCTTCCTGATTTCTTGCCGGTGCTTACTCCCTTATTCGGTCGTCAGGTAAGGAAAGCAAAAGAGCTGAGGAAGAAGCAGCTGGAGTGTCTGGTGCCGCTGGTGAGGAAGAGAAAAGCTTTACTGGAAAGCAGCGGAGACCGTAGCATACTTGAGCATTTAGAGATGGCAAGTCCAGCCGGCGCTGCCTACATTGACTCGCTGTTCGAGCTAGAAACGCCAGGGCAAGGCAGGTTAAGCGAAGAAGAGGTCGTGACGCTGTGTTCCGAAGCTATTAACGCCGGAACTGATACCAGTGCAACTACAGTGGAGTGGGCGCTGCTACATTTGGTTGTAAACCAAGAGATTCAAGAAAAGATGTACAGAGAAATTGTGGAGGTTGTGGGAAAAGATGGAGTTATAGGGGAGAATGATGTTGAGAAGATGAGTTACCTCAAAGCAGTGGTGAAGGAAACTTTTCGGCGACACCCGCCGAGCCATTTTCTGCTTTCGCATGCAGTGACAAAGAAGACGGAGCTGGGGGGATACAGCATCCCGGTAGACGCCAGCGTGGAGTTCTACACAGCATGGGTAACGGAGGATCCGAAATCGTGGGAGAATCCGAGTTTGTTCCAACCGGAGAGGTTCTTGGAGGGTGACGGGGTTGACGTGGACGTGACCGGGACAAGAGGCGTGAAGATGGTACCGTTTGGTGCGGGGAGGAGGATATGCCCGGCGATGACACTTGGAACGTTGCATATCAATTTGTTGCTGGCGAGGATGGTACAGGCATTCAAGTGGGTTCAAGTTCCGGGAGCTCCACCGGACCCAACGGAGACATTTGCTTTCACGGTGGTGATGAAGGAGCCTCTGAGAGCAGTCATAATACGTAGGTGA 1533 50.82 MMHLADIFIIFLSLVFLCLWWRYWSVTGGGPKHLPPGPPGWPLVGNLIQVILQRRPFIFVVRDLRAKYGPIFTMQMGQRTLVIVTSSDLIHEALVQRGAAFASRPADSPIRLLFSVGKCTVNSAKYGPLWRTLRRNFVTELVNPTRIRQCSWIRNWALENHMNRLKKEAKEKGFVEVMSNCRLTACSILICICFGCKMSEQEIKKIENILKDVMLMTTPKLPDFLPVLTPLFGRQVRKAKELRKKQLECLVPLVRKRKALLESSGDRSILEHLEMASPAGAAYIDSLFELETPGQGRLSEEEVVTLCSEAINAGTDTSATTVEWALLHLVVNQEIQEKMYREIVEVVGKDGVIGENDVEKMSYLKAVVKETFRRHPPSHFLLSHAVTKKTELGGYSIPVDASVEFYTAWVTEDPKSWENPSLFQPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAMTLGTLHINLLLARMVQAFKWVQVPGAPPDPTETFAFTVVMKEPLRAVIIRR 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 289620 291152 + Bma005470.2 Bma11g00002 90404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00002 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Bma11g00002 510 PANTHER CYTOCHROME P450 LIKE PROTEIN 4 508 - -
Bma11g00002 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 508 - -
Bma11g00002 510 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 SUPERFAMILY Cytochrome P450 35 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 Pfam Cytochrome P450 35 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00002 510 Gene3D Cytochrome P450 30 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g01207 Bma-Chr8:51039263 Bma11g00002 Bma-Chr11:289620 1.39E-145 dispersed
Bma10g00994 Bma-Chr10:23099920 Bma11g00002 Bma-Chr11:289620 1.92E-106 dispersed
Bma11g00002 Bma-Chr11:289620 Bma15g01013 Bma-Chr15:39862733 7.33E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00002 K21995 - zju:107420023 833.558