Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00034 ATGCAAACATCCCAGAAGCACCCAAGTTCAGCCCAGCCTATGCAAGACATAAAGTCCTACTATGTATCGCATTTCCATGCATTAACCGACAATGAATGTTCTAATCCGGGCAGCCAAAAGACGATTCTTTCCTTTGACTCCTGCAAGGAACAGTTTTTCACTCTCGAATCTTCCCCAGCCACCACTGACATCAACCCCTGTGATTCCTCTCCTGCTGTAAGTGTTGTTTCAAGCAGTTCCTTTTCGCCCCAAGGTTCTCAGTTGAGTTACTCAGATCCACACCATTCCCATGATAACACATACGGATCACCAATAAGTGGGTGCTCTGTAAACACTGAAGGCGACGAGTTAAAGCTCAAGCTCAGGGAACTGGAGATGTCATTACTGGGACCAGAATCAGATATTGTTGACAGCTGCTACTGCTCTTTCAGCGGTGAAACAAATCAACCCTCTTCAATGGCGCCCTGGAAAGTTCAAATGCTAGAAGTAATTCCCAAATTAAACCTGAAAGAAGTGCTCATAAGATGTGCACAAGCGATACACGAGTCTGATTTATCCACAGCGATGCATTTAATGGAGGTATTGGAAAAGATGGTGTCAGTATCAGGGGAGCCTTTGCAAAGGTTAGGTGCTTACTTGTTGGAGGGGCTGAGAGCGAGGCTAGAAAGATCAGGGAGTTTAATCTACAAGGCACTTAAGTGTGAGGAGCCGACTAGCTCGGAGTTAATGTCCTATATGTCTGTCCTCTATCAAATCTGCCCGTACTGGAAGTTTGCCTACTCATCTGCAAACGTTATCATTCGAGAAGCCGTCCAAAATGAACCCAGAATCCACATCATAGATTTCCAAATTGCACAGGGCAGTCAGTGGATACCACTCATTCAGGATCTTGCAATCCGGGGTGGAAGTCGTGGCCTGCCAATGATCCGCATTACTGGCGTAGATGATTCTCAATCAGCCCATGCTCGGGGAGGGGGACTTCATATCGTAGGGCAGAGGTTGTCGCAAGTTGCACAATCGTGTGGAGTGCGATTTGAGTTTAGTGCAGCAGCTATGTCTGGGTGTGAGGTAGAATTGTGTAATCTTGGGATACGGCCTGGGGAGGCTCTGGCCGTCAATTTTCCATATATCTTGCATCACATGCCTGACGAGAGTGTGAGCACTGAGAATCACAGAGATCGTGTGCTGAGGTTAGTCAAGAGTTTATCCCCCAAAGTTGTCGCCATTGTCGAGCAGGAATCCAACACCAACACTTCCCCATTCCTTTCGAGATTTGTCGAGACATTGGATTACTATACGGCCATGTTCGAATCAATAGATGCAGCTCGTCCAAAAGACGACAAACAGAGGATCAGAGCCGAGCAGCACTGCGTGGCTAGAGATATAGTGAACATGATAGCCTGTGAGGGGGCTGAAAGGGTCGAACGGCATGAACTTCATGGCAAATGGAGATCGAGATTAATGATGGCTGGGTTCACGCCTTTACCGTTGAGTTCGTCTGTGGCAGATGCTGCAAGAAAAATGTTGATAGAATACGATCGGAATTACGCTGTGGCAGAGAGTAATGGAGCTCTTTATCTGGGGTGGAAGAGGAGAGCCATGGCCACTTGCTCTGCGTGGAGGTAG 1626 47.48 MQTSQKHPSSAQPMQDIKSYYVSHFHALTDNECSNPGSQKTILSFDSCKEQFFTLESSPATTDINPCDSSPAVSVVSSSSFSPQGSQLSYSDPHHSHDNTYGSPISGCSVNTEGDELKLKLRELEMSLLGPESDIVDSCYCSFSGETNQPSSMAPWKVQMLEVIPKLNLKEVLIRCAQAIHESDLSTAMHLMEVLEKMVSVSGEPLQRLGAYLLEGLRARLERSGSLIYKALKCEEPTSSELMSYMSVLYQICPYWKFAYSSANVIIREAVQNEPRIHIIDFQIAQGSQWIPLIQDLAIRGGSRGLPMIRITGVDDSQSAHARGGGLHIVGQRLSQVAQSCGVRFEFSAAAMSGCEVELCNLGIRPGEALAVNFPYILHHMPDESVSTENHRDRVLRLVKSLSPKVVAIVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPKDDKQRIRAEQHCVARDIVNMIACEGAERVERHELHGKWRSRLMMAGFTPLPLSSSVADAARKMLIEYDRNYAVAESNGALYLGWKRRAMATCSAWR 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 534874 536499 - Bma005500.1 Bma11g00034 90436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00034 541 MobiDBLite consensus disorder prediction 84 107 - -
Bma11g00034 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 540 IPR005202 -
Bma11g00034 541 Pfam GRAS domain family 169 541 IPR005202 -
Bma11g00034 541 ProSiteProfiles GRAS family profile. 160 541 IPR005202 -
Bma11g00034 541 PANTHER SCARECROW-LIKE PROTEIN 13 13 540 IPR030005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01308 Bma-Chr2:55213484 Bma11g00034 Bma-Chr11:534874 0 dispersed
Bma11g00034 Bma-Chr11:534874 Bma13g01108 Bma-Chr13:44033288 2.30E-171 dispersed
Bma11g00034 Bma-Chr11:534874 Bma07g00028 Bma-Chr7:1238169 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57999 PF03514 GRAS 5.10E-124 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00034 - - mcha:111005597 748.814