Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00051 AGTCAGCACTTGCTTCCATGTATTATCATGTTGCAGATTCCCGCTTTTGATCCTACTAAGAAGAAGAAGAAAAAGAAGGTGGTCATACAGGATCCTGCTGATGACTCCGTGGACAAATTGACTGAGAAAACAGAAAGTTTAACTGTTTCCGATGGACTTGAAAGTGCATTTTCTGGCCTGAAAAAGAAAAAGAAGAAACCTGTAAGTTTTCTTAGTTTTCAGAAGAAAAAAAAAGGAATAAATGAATATCATGCTGTAGAAAATGAAGAAGCAGAAGGAATTGTTTTGCAGACACGCTATCCATGGGAAGGGACCACACGCGATTATCAATATGAGGAGCTGCTTGGTAGGGTTTTCAATATTCTCCGCGAGAATAATCCAGAACTAGCAGGGGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGAACAAAGAAAACGGTTTTCGTGAACTTCATGGATCTATGCAAATCGATGCATCGGCAACCTGATCATGTTATGGCTTTCCTGTTGGCTGAATTGGGGACAAGTGGATCACTTGATGGGCAGCAAAGATTAGTAGTGAAGGGAAGATTTGCACCAAAAAACTTTGAAGGAATTTTGCGTAGATATATTAACGATTATGTCATTTGCCTTGGGTGCAAAAGTCCAGACACTATACTTTCAAAGGAGAATCGACTGTTTTTTCTGCGATGTGAGAAGTGTGGATCGGGACGATCTGTCGCTCCAATCAAAGCTGGATTTGTTGCTCGTGTTGGTCGCAGAAATGCTGGAACCTGA 792 41.54 SQHLLPCIIMLQIPAFDPTKKKKKKKVVIQDPADDSVDKLTEKTESLTVSDGLESAFSGLKKKKKKPVSFLSFQKKKKGINEYHAVENEEAEGIVLQTRYPWEGTTRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKSMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINDYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 610200 612734 + Bma005518.1 Bma11g00051 90453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00051 263 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 108 215 IPR016189 GO:0003743|GO:0006413
Bma11g00051 263 Gene3D - 106 248 - -
Bma11g00051 263 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 212 247 IPR016190 GO:0003743|GO:0006413
Bma11g00051 263 SMART eIF2Bneu4 133 242 IPR002735 GO:0003743|GO:0006413
Bma11g00051 263 Pfam Domain found in IF2B/IF5 132 241 IPR002735 GO:0003743|GO:0006413
Bma11g00051 263 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 13 263 - -
Bma11g00051 263 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 13 263 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00195 Bma-Chr5:5420292 Bma11g00051 Bma-Chr11:610200 4.14E-156 dispersed
Bma11g00051 Bma-Chr11:610200 Bma02g00261 Bma-Chr2:2745855 6.77E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00051 K03238 - zju:107411571 427.172