Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00051 | AGTCAGCACTTGCTTCCATGTATTATCATGTTGCAGATTCCCGCTTTTGATCCTACTAAGAAGAAGAAGAAAAAGAAGGTGGTCATACAGGATCCTGCTGATGACTCCGTGGACAAATTGACTGAGAAAACAGAAAGTTTAACTGTTTCCGATGGACTTGAAAGTGCATTTTCTGGCCTGAAAAAGAAAAAGAAGAAACCTGTAAGTTTTCTTAGTTTTCAGAAGAAAAAAAAAGGAATAAATGAATATCATGCTGTAGAAAATGAAGAAGCAGAAGGAATTGTTTTGCAGACACGCTATCCATGGGAAGGGACCACACGCGATTATCAATATGAGGAGCTGCTTGGTAGGGTTTTCAATATTCTCCGCGAGAATAATCCAGAACTAGCAGGGGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGAACAAAGAAAACGGTTTTCGTGAACTTCATGGATCTATGCAAATCGATGCATCGGCAACCTGATCATGTTATGGCTTTCCTGTTGGCTGAATTGGGGACAAGTGGATCACTTGATGGGCAGCAAAGATTAGTAGTGAAGGGAAGATTTGCACCAAAAAACTTTGAAGGAATTTTGCGTAGATATATTAACGATTATGTCATTTGCCTTGGGTGCAAAAGTCCAGACACTATACTTTCAAAGGAGAATCGACTGTTTTTTCTGCGATGTGAGAAGTGTGGATCGGGACGATCTGTCGCTCCAATCAAAGCTGGATTTGTTGCTCGTGTTGGTCGCAGAAATGCTGGAACCTGA | 792 | 41.54 | SQHLLPCIIMLQIPAFDPTKKKKKKKVVIQDPADDSVDKLTEKTESLTVSDGLESAFSGLKKKKKKPVSFLSFQKKKKGINEYHAVENEEAEGIVLQTRYPWEGTTRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKSMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINDYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT | 263 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 610200 | 612734 | + | Bma005518.1 | Bma11g00051 | 90453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00051 | 263 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 108 | 215 | IPR016189 | GO:0003743|GO:0006413 | |
Bma11g00051 | 263 | Gene3D | - | 106 | 248 | - | - | |
Bma11g00051 | 263 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 212 | 247 | IPR016190 | GO:0003743|GO:0006413 | |
Bma11g00051 | 263 | SMART | eIF2Bneu4 | 133 | 242 | IPR002735 | GO:0003743|GO:0006413 | |
Bma11g00051 | 263 | Pfam | Domain found in IF2B/IF5 | 132 | 241 | IPR002735 | GO:0003743|GO:0006413 | |
Bma11g00051 | 263 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT | 13 | 263 | - | - | |
Bma11g00051 | 263 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 13 | 263 | IPR045196 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma05g00195 | Bma-Chr5:5420292 | Bma11g00051 | Bma-Chr11:610200 | 4.14E-156 | dispersed | |
Bma11g00051 | Bma-Chr11:610200 | Bma02g00261 | Bma-Chr2:2745855 | 6.77E-09 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00051 | K03238 | - | zju:107411571 | 427.172 |