Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00052 ATGGATCTCCTACTTCTGGAGAAGACCCTTGTGGGTCTCTTCGTCGCCATCGTTCTCGCCATCGTCATTTCCAAACTCCGTGGCAAGCGCTTCAAACTCCCTCCCGGACCCATTCCCGTACCTGTTTTTGGAAACTGGCTTCAAGTCGGCGACGATCTTAATCATCGCAACTTGACGCAATTGGCCAAGAAATTCGGCGACGTTTTCTTGCTCCGGATGGGTCAGCGTAATCTCGTTGTTGTTTCTTCCCCGGACCTGGCTAAAGAAGTGTTACACACCCAGGGAGTGGAATTCGGGTCCCGAACCCGAAACGTAGTGTTCGATATTTTCACCGGGAAGGGGCAGGATATGGTTTTCACAGTTTACGGAGAGCACTGGAGGAAAATGAGACGAATCATGACCGTCCCTTTCTTCACCAACAAGGTGGTCCAGCAGTATCGGTACGGTTGGGAAGCGGAGGCGGGCAGCGTAGTGGAGGACGTGAAGAAGAATCCAGAGGCGGCGACGAACGGAATCGTATTGCGGAGGAGGCTGCAGCTGATGATGTACAACAACATGTACAGAATCATGTTCGATCGGAGATTCGAGAGTGAGGATGACCCATTGTTCAACAAGCTCAAAGCTCTCAATGGAGAGAGAAGTAGATTGGCTCAAAGCTTCGAATACAACTATGGCGATTTCATTCCAATCCTGAGACCCTTTTTGAAAGGGTATTTGAAGATCTGCAAGGAAGTCAAGGAGAAAAGAATTCAACTCTTCAAGGACTACTTCGTCGACGAAAGAAAGAAGCTAGCGAGCACAAAGGGTGCAACAAACGATGGGCTGAAATGCGCCATCGACCACATCTTGGACGCGCAGCAGAAGGGAGAAATCAACGAAGACAACGTTCTTTACATCGTCGAGAACATTAACGTCGCCGCAATTGAAACAACACTCTGGTCTATCGAGTGGGGAGTTGCAGAGCTTGTGAATCATCCTGAAATTCAAAAGAAACTAAGAAAAGAGTTGGACGAAGTGCTTGGATATGGCGTTCAAGTAACAGAGCCGGACATGCCTAAACTGCCATACCTTCAGGCAGTGGTTAAGGAAACTCTACGGCTAAGAATGGCAATTCCCCTCCTCGTCCCACACATGAACCTGCACGAAGCAAAACTCGGAGGTTTTGATATTCCAGCAGAGAGCAAAATCCTGGTCAACGCTTGGTGGCTGGCCAACAACCCCGCGCATTGGAAGAAACCTGAAGAGTTCCGGCCAGAGAGATTCTTTGAGGAGGAATCTAAGGTTGATGCTAATGGCAATGATTTTAGGTACCTTCCGTTTGGGGCTGGTCGGAGAAGCTGCCCTGGAATCATACTTGCTTTGCCGATTCTCGGAATAACGATTGGTCGATTGGTTCAGAACTTTGAGCTCTTACCTCCTCCTGGACAAGACAAGATTGATACCTCGGAGAAAGGTGGGCAGTTCAGTTTGCACATACTGAAGCACTCCACCATTGTCGCCAAGCCGAGGTCGTTTTAG 1518 49.08 MDLLLLEKTLVGLFVAIVLAIVISKLRGKRFKLPPGPIPVPVFGNWLQVGDDLNHRNLTQLAKKFGDVFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAGSVVEDVKKNPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFNKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVKEKRIQLFKDYFVDERKKLASTKGATNDGLKCAIDHILDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGVAELVNHPEIQKKLRKELDEVLGYGVQVTEPDMPKLPYLQAVVKETLRLRMAIPLLVPHMNLHEAKLGGFDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESKVDANGNDFRYLPFGAGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKIDTSEKGGQFSLHILKHSTIVAKPRSF 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 627289 629180 + Bma005520.1 Bma11g00052 90454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00052 505 Gene3D Cytochrome P450 23 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
Bma11g00052 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
Bma11g00052 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Bma11g00052 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00052 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00037 Bma11g00052 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00052 Bma-Chr11:627289 Bma10g00246 Bma-Chr10:2272268 2.89E-73 dispersed
Bma11g00052 Bma-Chr11:627289 Bma07g00037 Bma-Chr7:1296922 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00052 K00487 - pop:7464737 938.717