Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00062 ATGGCTGCTTCTTCCACCTGTGTTCTTTCTTTCTTCTTCGTCTTTGCTTTGGTCCTTGTAAACCCTACACAGGCTCAACTTACTCCTGACTTCTACATTAAGAAATGCCCCCAGGCATTTCCTATCATTCGTAAAATTGTTTGGTCAGCTCTTCGCCGCGAGGGTCGCATGGGGGCATCGCTTCTTCGCCTGCACTTCCATGATTGTTTTGTCAACGGTTGCGATGGGTCAATTTTACTTGACGACACCCCCACTTTCACCGGCGAAAAGACAGCCTTTCCGAACAACAACTCAGTGAGAGGATTCGAGGTGGTGGATCAAATAAAATATGCATTAAACAGAGCGTGTGGAAATGTCGTGTCTTGTGCAGATATCTTGGCCGTCGCCGCTCGAGACTCTGTTAATCTGCTGGGAGGTCCATCGTATAAAGTTCTGGTGGGTCGAAGAGACGCAAGAACAGCAAGCTGGAGCGACGCAAACATCAACCTGCCGCCTCCATTCTTCAACTTATCGCAGCTCATTACCAACTACCAATCCCACGGCCTCGATCTGACAGACCTGGTCGCGCTTTCCGGCGGGCACACACTCGGACTGGCTCGCTGCCCTACTTTCGTAGCAAGGGCTTACAATGAAACCAACATAGACCGTAGATTTGCGGCGCAATTGAAAAGGAAATGCCCTCCAACCGGAGGAGCCTCCATCACACAGCCGTTGGATTCTAGCTCAAACTTCTTCGACAATGCTTACTTCAAGGCATTGTTGGGCTACAAGGGTCTGCTTCATTCCGATCAAGTGCTTTTCAAGGGCGACGGTACTGGCACTGACAAACTGGTTCTTCGCTACGCAAAATTTCCCCATCTGTTCTTTGCAGATTTTAGCAATTCCATGATCAAGATGGGTAACATGAAGCCACTCACCCAACCTAAGGGAGAAATCAGACTTAACTGCAGGGTCGTCAACTAA 963 49.12 MAASSTCVLSFFFVFALVLVNPTQAQLTPDFYIKKCPQAFPIIRKIVWSALRREGRMGASLLRLHFHDCFVNGCDGSILLDDTPTFTGEKTAFPNNNSVRGFEVVDQIKYALNRACGNVVSCADILAVAARDSVNLLGGPSYKVLVGRRDARTASWSDANINLPPPFFNLSQLITNYQSHGLDLTDLVALSGGHTLGLARCPTFVARAYNETNIDRRFAAQLKRKCPPTGGASITQPLDSSSNFFDNAYFKALLGYKGLLHSDQVLFKGDGTGTDKLVLRYAKFPHLFFADFSNSMIKMGNMKPLTQPKGEIRLNCRVVN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 721987 723138 + Bma005531.1 Bma11g00062 90464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00062 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Bma11g00062 320 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 SUPERFAMILY Heme-dependent peroxidases 26 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 Gene3D - 30 317 - -
Bma11g00062 320 CDD secretory_peroxidase 26 319 IPR033905 GO:0004601|GO:0042744
Bma11g00062 320 Pfam Peroxidase 44 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 ProSiteProfiles Plant heme peroxidase family profile. 26 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PANTHER PEROXIDASE 72-RELATED 8 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Bma11g00062 320 Gene3D Peroxidase, domain 2 164 299 - -
Bma11g00062 320 PANTHER CATIONIC PEROXIDASE 8 319 - -
Bma11g00062 320 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma11g00062 320 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00062 Bma-Chr11:721987 Bma14g01739 Bma-Chr14:37375870 9.16E-102 dispersed
Bma11g00062 Bma-Chr11:721987 Bma11g00063 Bma-Chr11:744759 0 tandem
Bma15g00752 Bma-Chr15:15206127 Bma11g00062 Bma-Chr11:721987 8.65E-83 transposed
Bma11g00062 Bma-Chr11:721987 Bma07g00045 Bma-Chr7:1368583 1.75E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00062 K00430 - pop:7465174 436.417