Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00064 | ATGGCGGCTTCTTTTGCGAGCATAGACCCGCCTGCGAATTCCCATCCACTCTTAACTTTCACCATACCCTCCTTCTCCGAGCTCTTGAGCTATGGTTGCGATGAGGTACAACCTACCGGCAGTAATGGCCGCCTCGGATTGTCGGATTGTACCGGGGAACGAACTGGGTCGGGTGTGCCTAAGTTCAAGTCTTTTTCTCCACCGATATTGCCGTTGTCTCCGTCCCCACTTTCTCCCTCTTCTTACTTCTCTATTCTTGCTGGGCTGAGCCCGGCTGAGCTCTTAGACTCCCCTGTTCTCTTTAACTCCTCTAACCATACTCTGCCATCACCGACGACGGGAGCATTCCCGTTCCAATCGTTCAACTGGAAGAGTAATTCCGACTTCAGCCAACAGAAGATTGAGCCGGAGAGCAAAAAATTGTCTGTTTTCTCCTTTCAAACGCAGCCAAAGCCTCCCTCAGCCAGCTCTAATCCTACTGTGTGTGAAGAGATTCAGATAGAAAAATTTCTCAACTCTCGGCCTCAGCAACAGGCGTGGAACTCTCAAGAACCATCAAAGCAGAACGAATTTTCATCGGGAATGGATGCAAAACAGGGTGATTTCACATCGAAACAGATAGTTCATCGTCCAAACAATGGAGTTATTCAATCGAATCACAGCAACCACCACCAACAGGGTCAGTCAGTAAGCAGAAGCTCCGACGATGGTTACAACTGGAGAAAGTACGGCCAGAAAGAGGTGAAAGGAAGCGAAAATCCAAGAAGTTATTACAAATGCACATTCCCCAGTTGCCCCACTAAGAAGAAGGTGGAAAGGTCGTTAGGCGGCCAAATTACTGAAATTGTCTACAAGGGCAGCCATAGCCATCCAAAACCTCAGTCTACCAGAAAATCCTCATCATCATCATCTTTAGCTCCTTTTCAGTCAATCCAAGCTTCTAATCCTGCTCTCAATGGCGCCCCTGAACTTTCATCTGCCTCCCACTCCGCTGCAACGCCTGAAAATTCCTCCATAACAATGGGGGAAGATGATTTTGATCAGAGCTCGCATAGCAGTAAACGGGAACGGAATGACTTTGACGAGGATGAACCATATGCCAAAAGATGCAGTAAAATGGAGGGTGACAAAGAAGGAATGTCAGCAGGTGGATGCAGAACAGTGAGAGAGCCTAGAGTCGTGTTTCAAACCACCAGTGACAAAGATATCTTAGTCGATGGATACAGGTGGAAAAAATATGGGCAGAAAGTCGTGAAGGGAAACCCAAATCCAAGGAGCTACTACAAGTGCACTAACCCAGGATGTCCTGTAAGAAAGCACGTAGAGAGAGCCTCGAATGATTTAAAATCAGTCATTACCACCTACGAGGGGAAGCACAACCACGGTGTCCCACTGCAATTTCTGAGCGAACTCCCTCCTGCAGCTACCATATACTTGCGAGCACTTCTTCGCAAAACCTGCAGTCACCATCCGCTTTGCCATCTCGTGGAGATCGCTGATAGTCCCAGAAGGAAGCGCATCGATTATTATATCAAAATCAGTCAAAGGCTGAGCAATGGGGATCTGGTGGTCGTCACTGTTGCCCATAATTCCTCCGGTTTCTTCATCTTCATCGTCCTCCGAGTCATATGA | 1632 | 47.79 | MAASFASIDPPANSHPLLTFTIPSFSELLSYGCDEVQPTGSNGRLGLSDCTGERTGSGVPKFKSFSPPILPLSPSPLSPSSYFSILAGLSPAELLDSPVLFNSSNHTLPSPTTGAFPFQSFNWKSNSDFSQQKIEPESKKLSVFSFQTQPKPPSASSNPTVCEEIQIEKFLNSRPQQQAWNSQEPSKQNEFSSGMDAKQGDFTSKQIVHRPNNGVIQSNHSNHHQQGQSVSRSSDDGYNWRKYGQKEVKGSENPRSYYKCTFPSCPTKKKVERSLGGQITEIVYKGSHSHPKPQSTRKSSSSSSLAPFQSIQASNPALNGAPELSSASHSAATPENSSITMGEDDFDQSSHSSKRERNDFDEDEPYAKRCSKMEGDKEGMSAGGCRTVREPRVVFQTTSDKDILVDGYRWKKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASNDLKSVITTYEGKHNHGVPLQFLSELPPAATIYLRALLRKTCSHHPLCHLVEIADSPRRKRIDYYIKISQRLSNGDLVVVTVAHNSSGFFIFIVLRVI | 543 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 758234 | 765608 | + | Bma005534.1 | Bma11g00064 | 90466 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00064 | 543 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 41 | 464 | IPR044810 | GO:0003700 | |
Bma11g00064 | 543 | SUPERFAMILY | WRKY DNA-binding domain | 233 | 293 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00064 | 543 | Pfam | WRKY DNA -binding domain | 235 | 291 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00064 | 543 | Pfam | WRKY DNA -binding domain | 406 | 461 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00064 | 543 | Gene3D | WRKY domain | 219 | 294 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00064 | 543 | MobiDBLite | consensus disorder prediction | 289 | 346 | - | - | |
Bma11g00064 | 543 | SUPERFAMILY | WRKY DNA-binding domain | 396 | 464 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00064 | 543 | MobiDBLite | consensus disorder prediction | 347 | 376 | - | - | |
Bma11g00064 | 543 | ProSiteProfiles | WRKY domain profile. | 229 | 293 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00064 | 543 | SMART | WRKY_cls | 404 | 463 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00064 | 543 | SMART | WRKY_cls | 234 | 292 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00064 | 543 | MobiDBLite | consensus disorder prediction | 213 | 238 | - | - | |
Bma11g00064 | 543 | MobiDBLite | consensus disorder prediction | 173 | 198 | - | - | |
Bma11g00064 | 543 | PANTHER | WRKY TRANSCRIPTION FACTOR WRKY24-LIKE | 41 | 464 | - | - | |
Bma11g00064 | 543 | MobiDBLite | consensus disorder prediction | 284 | 384 | - | - | |
Bma11g00064 | 543 | Gene3D | WRKY domain | 391 | 457 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00064 | 543 | MobiDBLite | consensus disorder prediction | 213 | 240 | - | - | |
Bma11g00064 | 543 | ProSiteProfiles | WRKY domain profile. | 399 | 464 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00043 | Bma11g00064 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00043 | Bma-Chr7:1350892 | Bma11g00064 | Bma-Chr11:758234 | 2.02E-138 | dispersed | |
Bma11g00064 | Bma-Chr11:758234 | Bma13g01107 | Bma-Chr13:44028849 | 6.62E-84 | dispersed | |
Bma11g00064 | Bma-Chr11:758234 | Bma10g00588 | Bma-Chr10:7220605 | 7.97E-14 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58003 | PF03106 | WRKY | 3.30E-24 | CL0274 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00064 | K13424 | - | vvi:100243352 | 518.464 |