Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00084 ATGCCTTCCATTGCTGGAGTTCGCCTCTCTATGATCGAGAACGAAGCTACATTTGATGAGATTGGAGATTTCAAATCGGTGGAAGCCGCGGAGGTGCCTAGATCCACTGGCGACGTCACACCTCAGAAGCGGAAATTGAGATCGAATTCTGAGCAGGCTAGGAAGAGCCCTGTATCTTTGTTAATGAAATGGAAGTCCCCCCGTCGATCCACAGATACTACACCTGATCGTCCTTCAAACCATGCGGATGATAGCCTTCCTAATGTGCGCAAATCACCTGTAAAATGCCTGGCTAAGAGTTTCAGCACTAAACCAAACTGGAATCCCAGAGGTCAGGAGCAAAAAAAGGCAGTGAAGGAAGCATTGCATGTGTCTACAGCGCCATCTAGTGTTGTATGCCGTGAAGATGAGCAAACGAGAATATTGAACTTCTGTAAGGATTCTGTAGAGAAAAGGAAACCCGGAAGTTTATATGTTTGTGGGTGCCCAGGCACTGGAAAATCATTATCCATGGAAAAAGTGAAGCATCGTCTTGTTGATTGGGCAACAGAGGCCGGTCTTCAGCTGCCGGATATCTTGGCTGTAAACTGCACTTCTCTATCAAATACATCTGACATATTTACCAAGATACTTGGTGAAAAGAAACAAAACAAGAAAAAGATTGGTTCAATTTCACCGCTGCAATATCTTCAGAGCTTTTACTCGCAACAACCAAAATCATCTTCCATGAAAATGACGCTGCTGATTGCAGATGAGTTGGATTACTTAATTACCAAGGATAAAGCAGTACTTAATGATCTTTTCATGCTTACAATTCTGCCCTTCTCCAGGTGTATTCTGATAGGTATTGCTAATGCCATTGACCTAGCAGATCGTTTTCTTCCTCGACTTCACTCATTAAATTGTAAGCCTCTGGTTATAACATTTAGGGCCTACACTAAAGATCAGATTATCAAGATTCTTCAAGAAAGGCTTATTTCGCTTCCTTTTTCTGTCTTTCAGCCACAATCACTGGAACTTTGTGCGAGAAAAATTTCTGCTATGTCGGGTGATATGAGACAAGCACTTTGTGTCTGCAGAAGTGCCATTGAACTGATAGAAGTTGAGGTATGTAAAACCGTAAATCTATCTGCACATCAAGATTCGAGCAAGGAACATGAATTTTCAGAACCGCAAGAATCTGATATTGTGAGAGTCGATCATATGGCTGCTGCACTGTCAAAGTCTTATAAATCATCAGCGGTGGACACCATAAAATCTCTTCCTCAACATCAGCAGATTATCCTTTGCTCTCTTGTGAAGCTTTTTCGAGGAGGAAGGAAGGATTCAACGGTTTGGGAGCTGAATAAATCCTACATAGATTCTTGCAAATCGACACTGATACCACCAGTTGGAACCTTAGAACTGTCAAACATGTATAGAGGTCTCAATGATCAGGGTCTTCTCAAACTAGGCCAATCTCGAGACGAAAAATTAAAAAGAGTGACATTAACAGTTGATGAAGGGGATATCACCTTTGCATTACAGGTGTGTTATGCATTTTTTTTTTTTTGTTACTCAGAATGA 1566 41.57 MPSIAGVRLSMIENEATFDEIGDFKSVEAAEVPRSTGDVTPQKRKLRSNSEQARKSPVSLLMKWKSPRRSTDTTPDRPSNHADDSLPNVRKSPVKCLAKSFSTKPNWNPRGQEQKKAVKEALHVSTAPSSVVCREDEQTRILNFCKDSVEKRKPGSLYVCGCPGTGKSLSMEKVKHRLVDWATEAGLQLPDILAVNCTSLSNTSDIFTKILGEKKQNKKKIGSISPLQYLQSFYSQQPKSSSMKMTLLIADELDYLITKDKAVLNDLFMLTILPFSRCILIGIANAIDLADRFLPRLHSLNCKPLVITFRAYTKDQIIKILQERLISLPFSVFQPQSLELCARKISAMSGDMRQALCVCRSAIELIEVEVCKTVNLSAHQDSSKEHEFSEPQESDIVRVDHMAAALSKSYKSSAVDTIKSLPQHQQIILCSLVKLFRGGRKDSTVWELNKSYIDSCKSTLIPPVGTLELSNMYRGLNDQGLLKLGQSRDEKLKRVTLTVDEGDITFALQVCYAFFFFCYSE 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 960515 965308 - Bma005553.1 Bma11g00084 90486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00084 521 Gene3D - 112 301 IPR027417 -
Bma11g00084 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 377 IPR027417 -
Bma11g00084 521 SMART Cdc6_C_2 429 508 IPR015163 -
Bma11g00084 521 Gene3D - 302 418 - -
Bma11g00084 521 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 30 509 - -
Bma11g00084 521 Pfam CDC6, C terminal winged helix domain 429 507 IPR015163 -
Bma11g00084 521 Pfam AAA domain 153 272 IPR003593 -
Bma11g00084 521 CDD AAA 137 298 - -
Bma11g00084 521 PIRSF Cdc6 10 513 IPR016314 GO:0006270|GO:0051301
Bma11g00084 521 MobiDBLite consensus disorder prediction 23 89 - -
Bma11g00084 521 SUPERFAMILY Winged helix DNA-binding domain 415 509 IPR036390 -
Bma11g00084 521 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 30 509 - -
Bma11g00084 521 Gene3D - 419 505 IPR036388 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00084 Bma-Chr11:960515 Bma14g00768 Bma-Chr14:8502750 1.15E-30 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00084 K02213 - mnt:21404873 633.639