Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00119 ATGGGTAACGGTGTTGGAAAGCTTAGCGCTTGTTTTACCGGGGAAGTGGATGGTCGCCGGAGACCGTATATATCTGTTTTGTTATCGGATCCTCTCGACGAGGGTTTGGGCCATTCGTTTTGCTACGTGCGTCCCGATCCCTCTCTGCTTTCTTCTTCCAAGGTTCATTCGGATGAAGCCACCACTTTCAGAGCAATCTCTGGTGCTTCTGTCAGTGCTAACGCGTCTACTCCTCTCTCTACGTCTTTGATTGATCTGTATTCCTACCCCAGTATTGATCGAGCTGCGGCCTTCGAGAGCTCGACTTCTTTCGCTTCCATTCCTCTTCAGCCGATCCCCCGAAATTTTGTCAATTCTGGGCCGATTTATGGGAACAACTACTATGGTGGAGTTTCTGCCTCTGGACCTCTTGAAAGAGGATTTCTATCGGGTCCGATTGAGCGAGGATTTATGTCGGGTCCGCTGGATCGTGGTATTTTTTCGGGTCCTCTGGAGAAGGCTTGCTCTACTGACTTTAAGAGGAGCTTCTCTCATGGAGGTTTTGCTTCTAGATCCAGATCGAAAACTAGCCGGATTATTGGGATTCTTCGTAGAGCACTGTCGAAGACCGTCTCTCGAGGACAGAACTCCATAGTCGCGCCGATTAAAGGAATGAAAGAACCGGATTGGATAATCGGACCGGAGAAGCACAACGAGAATTTGACGGTGAGTAGTTTAAATTTAAGCAGCGATGGTAGCTTGGAGGAGGAAGATTCTATGGAGACCCAGAATCTTCAGTGGGCTCAAGGTAAAGCCGGAGAGGATCGAGTTCACGTGGTTGTCTCGGAGGAGCATGGCTGGGTTTTCGTCGGAATCTATGACGGCTTCAACGGCCCTGATGCGCCCGATTACCTTCTAACAAACTTGTACTCTGCTGTACACAAGGAGCTCAAAGGATTATTATGGGATGAAAAGTGTGAACCTCCCCGAGTGGCTGCTCCTATCAATTCCCCTGTTCGATCTGAAAATCCCCTTTCAGAAACGGCAGATTCTTCACCGGTTTGTGACGGCGATTCTGTGAGGAATCAGACGGCCGATGCTTGCTCTCAGTGCTTCGAGCAAGAGAATTATCCCTGCCCAAGTGGGACAGGAACTTTCAATTCGAATTCAAGAAGACGAAAGGGAAAAAATTCAAGAGGAAAATACCGCGGAGCAGCACAGAAATGGGAGGATAATCAGAGAAGATGGAAGTGCGAGTGGGACAGAGAGAGACAAGAACTCGATCGTAGGTTGAAAGAACAGCTAAATCGATCTGATTCCGACGGTCTTAGATCGATCAATCACTCAGATGTGTTGAAAGCGCTGTCTCAAGCGCTGAGAAAGACAGAGGAGGCTTACTTAGATATTGCAGATAAGATGCTTGTGGAAAATCCTGAGCTAGCTCTAATGGGATCTTGTGTGCTCGTAATGCTCATGAAAGGAGACGATGTTTATGTAATGAACGTGGGGGATAGTCGAGCCGTTCTAGCTCAGAAAGAACCGGATTATTGGCTCGGAAGAATCTCAAACGACTTGGAAAAGATAAATGAAGAAACAATGTATGATCTCGAAGGAGTAGATGCTGATCGAACCTATACAGTTTGCAATTTAACTGCCACTCAACTTTCCATGGATCACAGCACAAGTGTAGAAGAGGAAGTTCAGAGGATAAAAAACAAACACCCGGACGATGCTTGTGCGGTGATGCACGATCGGGTGAAAGGCTCGTTGAAGGTCACCCGAGCATTTGGGGCTGGATTTCTCAAACAGCCAAAATGGAATAATGCACTTCTAGAGGCTTTCAGAATAGACTACATAGGAACATCCCCATACATCACTTGTTCTCCATCTCTCTACCACCATAGACTTGGCTCCAAAGACAGGTTTTTGATATTATCTTCTGATGGCCTCTACCAATACTTCACAAACGAGGAAGCTGTTTCAGAAGTTGAACTTTTCATCCAATTACAACCCGAAGGAGACCCCGCTCAGCATCTCGTCGAGGAAGTCCTCTTTCGGGCTGCAAAAAAAGCAGGCATGGATTTTCACGAATTGCTTGAAATCCCGCAAGGTGACCGGAGGAAATATCACGACGACGTTTCGATCATCGTAATTTCCTTGGAGGGAAGGATTTGGAGATCATGCGTA 2166 47.05 MGNGVGKLSACFTGEVDGRRRPYISVLLSDPLDEGLGHSFCYVRPDPSLLSSSKVHSDEATTFRAISGASVSANASTPLSTSLIDLYSYPSIDRAAAFESSTSFASIPLQPIPRNFVNSGPIYGNNYYGGVSASGPLERGFLSGPIERGFMSGPLDRGIFSGPLEKACSTDFKRSFSHGGFASRSRSKTSRIIGILRRALSKTVSRGQNSIVAPIKGMKEPDWIIGPEKHNENLTVSSLNLSSDGSLEEEDSMETQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLTNLYSAVHKELKGLLWDEKCEPPRVAAPINSPVRSENPLSETADSSPVCDGDSVRNQTADACSQCFEQENYPCPSGTGTFNSNSRRRKGKNSRGKYRGAAQKWEDNQRRWKCEWDRERQELDRRLKEQLNRSDSDGLRSINHSDVLKALSQALRKTEEAYLDIADKMLVENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKEPDYWLGRISNDLEKINEETMYDLEGVDADRTYTVCNLTATQLSMDHSTSVEEEVQRIKNKHPDDACAVMHDRVKGSLKVTRAFGAGFLKQPKWNNALLEAFRIDYIGTSPYITCSPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEVELFIQLQPEGDPAQHLVEEVLFRAAKKAGMDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1139330 1141854 + Bma030412 Bma11g00119 90521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00119 722 MobiDBLite consensus disorder prediction 375 398 - -
Bma11g00119 722 PANTHER PROTEIN PHOSPHATASE 2C 12 722 IPR015655 GO:0004722|GO:0006470
Bma11g00119 722 MobiDBLite consensus disorder prediction 327 349 - -
Bma11g00119 722 PANTHER - 12 722 - -
Bma11g00119 722 CDD PP2Cc 417 713 IPR001932 -
Bma11g00119 722 ProSiteProfiles PPM-type phosphatase domain profile. 250 713 IPR001932 -
Bma11g00119 722 MobiDBLite consensus disorder prediction 332 349 - -
Bma11g00119 722 Gene3D - 228 718 IPR036457 -
Bma11g00119 722 Pfam Protein phosphatase 2C 434 677 IPR001932 -
Bma11g00119 722 SUPERFAMILY PP2C-like 264 714 IPR036457 -
Bma11g00119 722 SMART PP2C_4 251 711 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00102 Bma11g00119 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00389 Bma-Chr5:12212581 Bma11g00119 Bma-Chr11:1139330 4.84E-108 dispersed
Bma05g00390 Bma-Chr5:12241464 Bma11g00119 Bma-Chr11:1139330 0 dispersed
Bma06g01503 Bma-Chr6:51508273 Bma11g00119 Bma-Chr11:1139330 3.62E-12 dispersed
Bma11g00119 Bma-Chr11:1139330 Bma12g00221 Bma-Chr12:2919914 1.05E-78 dispersed
Bma11g00119 Bma-Chr11:1139330 Bma04g00665 Bma-Chr4:6405083 0 wgd
Bma11g00119 Bma-Chr11:1139330 Bma07g00102 Bma-Chr7:1758738 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00119 - - csv:101222644 1159.05