Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00120 ATGGCAGACGCGGAGGATATTCAGCCACTTGTGTGTGACAATGGAACAGGAATGGTTAAGGCTGGTTTTGCTGGAGATGACGCTCCGAGGGCAGTATTCCCTAGTATCGTGGGTCGTCCACGACACACAGGGGTGATGGTTGGTATGGGCCAGAAAGATGCATATGTTGGTGATGAAGCTCAATCCAAACGGGGTATATTAACATTGAAGTACCCGATTGAGCATGGAATTGTCAGCAACTGGGATGATATGGAGAAGATTTGGCATCACACCTTTTACAACGAGCTCAGAGTGGCTCCTGAAGAACATCCAGTTCTGCTCACTGAAGCACCTCTTAACCCAAAGGCCAATCGTGAAAAAATGACCCAAATCATGTTTGAGACTTTCAACACTCCGGCAATGTATGTGGCTATCCAAGCGGTTCTCTCCCTCTATGCCAGTGGACGAACAACCGGTATTGTTTTGGACTCCGGTGATGGTGTCAGCCATACCGTCCCTATTTACGAGGGATACGCCCTTCCCCATGCCATTCTTCGTCTTGACCTAGCAGGGCGCGACCTCACGGATGCCCTGATGAAAATACTGACTGAACGTGGCTATTCCTTTACCACCACAGCCGAGCGTGAAATTGTTAGGGACGTGAAGGAGAAGCTTGCATATATTGCTCTTGATTATGAGCAAGAACTTGAAACTGCCAAGACTAGTTCTGCTGTCGAGAAGAGCTACGAGTTACCCGATGGGCAGGTCATCACAATCGGCGCTGAGCGTTTCCGGTGTCCGGAGGTTCTTTTCCAGCCTTCCATGATCGGGATGGAGGCTGCTGGCATTCATGAAACGACGTACAATTCCATCATGAAATGCGACGTTGACATTAGGAAGGATTTGTATGGAAACATTGTCCTTAGTGGTGGCTCCACAATGTTCCCCGGTATTGCTGATAGAATGAGCAAGGAGATAACTGCTTTAGCCCCTAGCAGTATGAAAATCAAGGTCGTGGCTCCGCCGGAAAGAAAGTACAGTGTCTGGATTGGTGGTTCCATATTGGCTTCCCTCAGCACTTTCCAACAGATGTGGATTGCAAAGGCAGAGTACGACGAATCAGGCCCATCAATTGTGCATAGAAAATGCTTCTGA 1134 48.59 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1143658 1145104 - Bma005586.1 Bma11g00120 90522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00120 377 Gene3D - 10 371 - -
Bma11g00120 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Bma11g00120 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Bma11g00120 377 Pfam Actin 5 377 IPR004000 -
Bma11g00120 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Bma11g00120 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Bma11g00120 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Bma11g00120 377 SMART actin_3 7 377 IPR004000 -
Bma11g00120 377 PANTHER ACTIN 3 1 376 - -
Bma11g00120 377 Gene3D - 140 340 - -
Bma11g00120 377 PANTHER ACTIN 1 376 IPR004000 -
Bma11g00120 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Bma11g00120 377 PRINTS Actin signature 28 37 IPR004000 -
Bma11g00120 377 PRINTS Actin signature 51 62 IPR004000 -
Bma11g00120 377 PRINTS Actin signature 63 85 IPR004000 -
Bma11g00120 377 PRINTS Actin signature 117 130 IPR004000 -
Bma11g00120 377 PRINTS Actin signature 142 161 IPR004000 -
Bma11g00120 377 PRINTS Actin signature 238 254 IPR004000 -
Bma11g00120 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01494 Bma-Chr4:50945111 Bma11g00120 Bma-Chr11:1143658 0 dispersed
Bma04g01498 Bma-Chr4:51007317 Bma11g00120 Bma-Chr11:1143658 0 dispersed
Bma10g00648 Bma-Chr10:9319360 Bma11g00120 Bma-Chr11:1143658 1.00E-12 dispersed
Bma03g01025 Bma-Chr3:11390098 Bma11g00120 Bma-Chr11:1143658 0 transposed
Bma09g00406 Bma-Chr9:34211262 Bma11g00120 Bma-Chr11:1143658 0 transposed
Bma10g01116 Bma-Chr10:35416835 Bma11g00120 Bma-Chr11:1143658 3.22E-144 transposed
Bma11g00832 Bma-Chr11:26361226 Bma11g00120 Bma-Chr11:1143658 2.77E-39 transposed
Bma12g00933 Bma-Chr12:41011392 Bma11g00120 Bma-Chr11:1143658 3.45E-93 transposed
Bma13g00594 Bma-Chr13:13651268 Bma11g00120 Bma-Chr11:1143658 3.75E-119 transposed
Bma10g01130 Bma-Chr10:37302351 Bma11g00120 Bma-Chr11:1143658 8.20E-39 transposed
Bma11g00120 Bma-Chr11:1143658 Bma03g00129 Bma-Chr3:989516 0 wgd
Bma11g00120 Bma-Chr11:1143658 Bma08g01117 Bma-Chr8:50119908 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00120 K10355 - mnt:21407928 755.747