Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00140 GAATCTAAGACGATGGATTATAAGAGATTTGAATTGCTTTTCTGGGCTTTGTTGATTACGAGCTGGGTATGTTGTTCTACTGGGTTTACACCTGCTGACAATTATCTTATAAACTGTGGATCGAATGCTAATTCTTCAGTTGGCAGCCGTGTTTTTGTTGCTGATAATTTTTACTCGAAAGTGCTTTCTACCCCGCAAGATGTTCTTGCCAATAACAATGAGAATTCCATCTCAACTCTGTATCGAACGGCCAGAATCTTTACCGGATCCTCAAAGTACACATTTTCAATTAGTCAGAGAGGAAGACACTGGATCAGACTCTATTTCTACCCGTTTGTTTATTCCACTTATCATTTGAGTGCAGCAAAATTTTCCGTTTCTACTCAAAATAATGTTCTTTTGGGCGATTATGTCGCTTCGAATAATCCAACTGTGAAGGAATTCTCCGTAAATGTCACCTCAAGCGCACTTGTAATTGCTTTCACCCCTTCCAACGGCTCATTTGCATTCTTGAACGCCATAGAAGTAGTTTCAGTTCCTGATTGGCTGATTCCTGATGCTGCTGCTGAAACATTCAACCCATCAGGGCAATTTCAAGGATTCTCAAATCTTGCTCTCGAAACAGTTCATCGGATAAACATGGGTGGCCCGGCAGTGACTTCTGACGACGATACACTATGGCGAACTTGGATTTCTGATGCAGACCTATCAGAACCAAAAAATGGAGTTTTGAATATCTCAAATATTCCAGCCGTTAAATATGTTGCCGAAGGGTCGACAGAAGATATTGCGCCAAAACCTGTCTATGGCACTTTATCCCAGATGAACACAGTGGATGATCCGAACAGTAATTTCAATGTCAGCTGGAAGTTTGATGTGGATCCTGGATTTCTCTACCTTGTCCGGTTTCATTATTGTGACATTGTGAGTAAATCTCTTCACTCTCTGTATTTCAACGTTTATATCAATTCTTGGTTGATCGATCGGGACCTTGATCTTTCTTTGAGAATTAATGTTCTGGCTGCTCCGTACTATAGAGATGCAATTATCTCAATCGGTACCCAAAACACCGTTCGAGTCAGTATTGGTCGATCCTTTTTGGATAATGTTTATCCAAATGCAATTCTAAATGGGCTGGAGATTATGAAAATGAACAATTCTGCAGGAAGCCTCAGTGCCGAGTCCTCTATCGGTAATTCTCCCGATTCGGGTTCGAAAATACACGTGGGGGTGATTGTTGGTGCGACTGTCGGGGTGTTTGCTGTAATTTTACTGGTTGGAACTCTGTTTATGTTGGGCAGAAGAAGAAGGCAGATGCTTCTTCAGGCTCGTTCGAAGAGTTGGGTTCCATTATCGACCAACGGAGGAAACTCACTCACCATGGGAAGTAAATATTCGAATGGAACAATTGCGAGTGGGGTATCTAATTATGGGTATAGAATTCCTTTTGCAACCGTCCAAGAATGTACTAACAATTTCGACGATAGCTGGGTTATTGGGATTGGTGGGTTTGGAAAGGTCTATAAGGGAGAGTTAAGTGATGGCACAAAAGTGGCTGTTAAGAGGGGAAATCCCAAGTCTCAGCAGGGATTAGCAGAGTTTCAAACTGAAATTGAAATGCTGTCTCAATTTCGCCACCGCCATCTTGTTTCGCTGATTGGCTACTGCGATGAGCGGAATGAGATGATATTGGTTTATGAGTATATGGAAAATGGAACCTTGAAGAGTCATCTCTATGGTGCGGGACTTGCCAGTTTGAGCTGGAAGGAGAGGCTTGAGATATGCATTGGAGCAGCTAGAGGACTGCATTATCTTCACACTAGCTATGCAAAGCCGGTTATCCATCGCGATGTGAAGTCGGCAAACATATTACTTGACGAGAATCTCATGGCTAAAGTTGCTGATTTTGGACTTTCGAAAACCGGTCCTGAGATTGATCAAACCCATGTGAGTACGGCCGTGAAGGGAAGTTTTGGATATCTCGACCCTGAATATTTCAGAAGGCAGCAACTCACTGAGAAGTCCGATGTATATTCATTTGGGGTCGTTTTGTTTGAAGTAATCTGTGCTAGGCCTGTCATAGATCCATCTCTTCCTAGAGAAATGGTGAATTTAGCTGAGTGGTCAATGAAATGGCAGAAGAGAGGGCAATTGGACCAAATTATAGACTCTACTCTGGTGGGGAAAATTAAACCAGATTCACTGAGAAAGTTCGGAGAAACCGCAGAGAAATGCTTGGCTGACTATGGAGTTGACAGACCTGCCATGGGCGATGTCTTGTGGAATCTCGAGTATGCCCTTCAACTTCAACAAGCGGTGATAGAGGGCGATCCTGAAGATAACAGTACTAATATGATCGGTGAGCTGTCTCCTCAGGTCAACAATTTCAACGAATCGGATGCAAGCGTTTCAGCTACGCAATTAGAGGTTCCGGGAGTGGACGATCTTTCTGGCGTCTCAATGAGTAGGGTCTTCTCACAGTTGGTGAAATCCGAAGGTAGTGTTGAAACTCTTGGTTGTACAACTGTCATTTGTTCCGACAAAACAGGTACTTTGACAACCAATCAGATGGCTGTGGCAAAACTTGTGGCTATTGGTTCTAGACCCGGTGCTATTCGGGACTTTGATGTTGAAGGGACAACATATAATCCTTTTGATGGAAAAATACATGGCTGGCCAAATAAAATGGATGCTAATCTTCAAATGATTGCAAAGATTTCTGCTATCTGTAATGATGCTGGTGTTGAACAATCTGGAAATCATTTTGTTGCCAATGGCATGCCCACCGAAGCAGCATTGAAGGTTTTGGTGGAAAAAATGCGACTTCCTGAAGGAATTGGTTCTGGCTCACATTCTGCTCATGAGGATATACTGCGGTGCTGTCAACAATGGAAAAAAATTGAACATAGGATTGCAACACTGGAGTTCGATCGAGATCGAAAATCTATGGGAGTAATTTCTTCTTCCAGCTCAGGAAAAAATTTATTACTGGTGAAGGGCGCAGTGGAAAATGTCTTGGAGCGAAGTTCATTCATTCAGTTGCTTGATGGTTCTGTAGCAGAACTGGATGATAATTCAAAAAATGTTATCTTAGAAAGCCTTCGTGAAATGTCGACTGGTGCATTAAGATGTTTGGGTTTTGCGTATAAGGAAGAACTTGGAGAGTTTTCACAATATAACGGAGATGAAGAGCATCCTGCTCATGAGCTTTTACTTAACCCATCCAACTACTCCATGATTGAGAGTAATCTGATATTTGTTGGTTTAGTTGGGCTGAGGGATCCTCCTCGGAAAGAAGTACGTCAAGCTATCAAAGACTGCAAAGCTGCAGGAATTCGTGTCATGGTTATAACTGGAGACAACAAGAATACTGCCGAAGCTATTTGCCGTGAAATAGGTGTATTTGGATCTCATGAAAATATTGTCTCAAAAAGCTTAACTGGAAGAGAATTCATGGATATGAACCATCAAAGTCAGAAAATTCATTTGACACAAAAGGGAGGGCTCTTGTTCTCTAGGGCTGAACCTAGGCATAAACAAGAGATCGTGAGGTTGCTTAAAGAGGAAGATGAAGTTGTTGCAATGACTGGAGATGGAGTGAATGATGCACCTGCCCTTAAATTGGCAGATATTGGGATAGCCATGGGCATTGCTGGGACTGAGGTTGCAAAGGAAGCCGCTGACATGGTGCTAGCAGATGATAATTTTAGCTCTATAGTTGCTGCAGTTGGTGAAGGAAGATCAATTTACAACAATATGAAGGCATTTATCAGTTTGCCTTGCATTCTCTCCCTTATCAATTGTAAACATTTTTGCAGGTATATGATTTCGTCAAATATCGGTGAGGTTGCCTCCATATTCTTGACAGCTGCTCTAGGCATTCCTGAAGGCATGATACCTGTTCAGCTTCTCTGGGTCAACCTTGTGACAGATGGGCCTCCGGCAACAGCACTCGGTTTCAATCCTCCAGACAAAGATATAATGAAGAAACCACCAAGAAGAAGCAATGATTCATTGATTACTGCTTGGATTTTATTCCGCTATCTGGTTATTGGACTCTACGTGGGGATAGCAACAGTGGGAGTGTTTGTCATCTGGTACACACATTCCTCATTCTTAGGCATTGACTTAAGTGGGGATGGGCATAGTCTTGTTACCTACTCTCAACTTGCAAGCTGGGATCAGTGCTCTTCTTGGGAAGGATTTTCCGTCTCGCCCTACTCAGCTGGCAGCCAAGTCTTCAATTTCGACTCAAAGCCGTGCGAATACTTCAAATCCGGTAAAATTAAGGCCTCTACACTCTCTCTTTCTGTCTTGGTAGCGATCGAGATGTTCAATTCCCTGAATGCACTTTCTGAAGATGGGAGTCTTCTTACAATGCCCCCTTGGGTTAACCCTTGGCTCCTTCTCGCCATGTCCATCTCATTTGGGCTGCACTTTCTCATCCTCTACGTGCCATTCCTTGCTCAAATATTTGGCATAGTCCCTCTCAGCTTGAACGAATGGCTCTTGGTGGTGGCGGTCTCTCTTCCGGTAATTCTAATCGACGAGATTTTGAAGTTTGTGGGAAGGTTTACGAGTGGATTCAGGAATTCAACTTCGACCAAGTCTTCAAAGCGAAAGTCGGAGTAA 4632 42.94 ESKTMDYKRFELLFWALLITSWVCCSTGFTPADNYLINCGSNANSSVGSRVFVADNFYSKVLSTPQDVLANNNENSISTLYRTARIFTGSSKYTFSISQRGRHWIRLYFYPFVYSTYHLSAAKFSVSTQNNVLLGDYVASNNPTVKEFSVNVTSSALVIAFTPSNGSFAFLNAIEVVSVPDWLIPDAAAETFNPSGQFQGFSNLALETVHRINMGGPAVTSDDDTLWRTWISDADLSEPKNGVLNISNIPAVKYVAEGSTEDIAPKPVYGTLSQMNTVDDPNSNFNVSWKFDVDPGFLYLVRFHYCDIVSKSLHSLYFNVYINSWLIDRDLDLSLRINVLAAPYYRDAIISIGTQNTVRVSIGRSFLDNVYPNAILNGLEIMKMNNSAGSLSAESSIGNSPDSGSKIHVGVIVGATVGVFAVILLVGTLFMLGRRRRQMLLQARSKSWVPLSTNGGNSLTMGSKYSNGTIASGVSNYGYRIPFATVQECTNNFDDSWVIGIGGFGKVYKGELSDGTKVAVKRGNPKSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILVYEYMENGTLKSHLYGAGLASLSWKERLEICIGAARGLHYLHTSYAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVICARPVIDPSLPREMVNLAEWSMKWQKRGQLDQIIDSTLVGKIKPDSLRKFGETAEKCLADYGVDRPAMGDVLWNLEYALQLQQAVIEGDPEDNSTNMIGELSPQVNNFNESDASVSATQLEVPGVDDLSGVSMSRVFSQLVKSEGSVETLGCTTVICSDKTGTLTTNQMAVAKLVAIGSRPGAIRDFDVEGTTYNPFDGKIHGWPNKMDANLQMIAKISAICNDAGVEQSGNHFVANGMPTEAALKVLVEKMRLPEGIGSGSHSAHEDILRCCQQWKKIEHRIATLEFDRDRKSMGVISSSSSGKNLLLVKGAVENVLERSSFIQLLDGSVAELDDNSKNVILESLREMSTGALRCLGFAYKEELGEFSQYNGDEEHPAHELLLNPSNYSMIESNLIFVGLVGLRDPPRKEVRQAIKDCKAAGIRVMVITGDNKNTAEAICREIGVFGSHENIVSKSLTGREFMDMNHQSQKIHLTQKGGLLFSRAEPRHKQEIVRLLKEEDEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEAADMVLADDNFSSIVAAVGEGRSIYNNMKAFISLPCILSLINCKHFCRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSNDSLITAWILFRYLVIGLYVGIATVGVFVIWYTHSSFLGIDLSGDGHSLVTYSQLASWDQCSSWEGFSVSPYSAGSQVFNFDSKPCEYFKSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSISFGLHFLILYVPFLAQIFGIVPLSLNEWLLVVAVSLPVILIDEILKFVGRFTSGFRNSTSTKSSKRKSE 1543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1239187 1250666 + Bma005606.1 Bma11g00140 90542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00140 1543 Pfam haloacid dehalogenase-like hydrolase 842 1210 - -
Bma11g00140 1543 ProSitePatterns E1-E2 ATPases phosphorylation site. 847 853 IPR018303 -
Bma11g00140 1543 Gene3D Phosphorylase Kinase; domain 1 458 568 - -
Bma11g00140 1543 SUPERFAMILY Protein kinase-like (PK-like) 473 764 IPR011009 -
Bma11g00140 1543 SFLD p-type atpase 828 1248 IPR044492 -
Bma11g00140 1543 Gene3D - 1205 1528 - -
Bma11g00140 1543 Pfam Protein tyrosine and serine/threonine kinase 498 690 IPR001245 GO:0004672|GO:0006468
Bma11g00140 1543 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 827 1542 - -
Bma11g00140 1543 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 852 1092 IPR023299 GO:0000166
Bma11g00140 1543 SUPERFAMILY HAD-like 843 1315 IPR036412 -
Bma11g00140 1543 SUPERFAMILY Calcium ATPase, transmembrane domain M 828 1525 IPR023298 -
Bma11g00140 1543 Pfam Malectin-like domain 37 384 IPR024788 -
Bma11g00140 1543 Gene3D - 842 856 IPR023214 -
Bma11g00140 1543 Gene3D - 828 841 - -
Bma11g00140 1543 SFLD C1.7: P-type atpase like 828 1248 - -
Bma11g00140 1543 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1170 1266 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma11g00140 1543 ProSiteProfiles Protein kinase domain profile. 493 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00140 1543 PRINTS P-type cation-transporting ATPase superfamily signature 845 859 - -
Bma11g00140 1543 PRINTS P-type cation-transporting ATPase superfamily signature 1196 1215 - -
Bma11g00140 1543 PRINTS P-type cation-transporting ATPase superfamily signature 1088 1099 - -
Bma11g00140 1543 PRINTS P-type cation-transporting ATPase superfamily signature 1220 1232 - -
Bma11g00140 1543 PRINTS P-type cation-transporting ATPase superfamily signature 1110 1120 - -
Bma11g00140 1543 Gene3D - 875 1100 IPR023299 GO:0000166
Bma11g00140 1543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Bma11g00140 1543 Gene3D Transferase(Phosphotransferase) domain 1 569 786 - -
Bma11g00140 1543 SMART serkin_6 493 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00140 1543 CDD STKc_IRAK 499 764 - -
Bma11g00140 1543 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
Bma11g00140 1543 Pfam Cation transporting ATPase, C-terminus 1296 1522 IPR006068 -
Bma11g00140 1543 Gene3D - 204 386 - -
Bma11g00140 1543 Gene3D - 34 179 - -
Bma11g00140 1543 PANTHER CALCIUM-TRANSPORTING ATPASE 827 1542 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00120 Bma11g00140 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00475 Bma-Chr8:22724207 Bma11g00140 Bma-Chr11:1239187 3.96E-79 dispersed
Bma10g00664 Bma-Chr10:9542949 Bma11g00140 Bma-Chr11:1239187 7.70E-175 dispersed
Bma11g00140 Bma-Chr11:1239187 Bma14g01243 Bma-Chr14:19989117 0 dispersed
Bma14g00362 Bma-Chr14:4390302 Bma11g00140 Bma-Chr11:1239187 3.80E-72 dispersed
Bma07g00258 Bma-Chr7:3217795 Bma11g00140 Bma-Chr11:1239187 2.32E-33 transposed
Bma09g00253 Bma-Chr9:13010364 Bma11g00140 Bma-Chr11:1239187 0 transposed
Bma14g00283 Bma-Chr14:3579446 Bma11g00140 Bma-Chr11:1239187 0 transposed
Bma14g02048 Bma-Chr14:43846303 Bma11g00140 Bma-Chr11:1239187 8.03E-125 transposed
Bma11g00140 Bma-Chr11:1239187 Bma07g00120 Bma-Chr7:1932200 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66763 PF00702 Hydrolase 8.50E-20 CL0137 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00140 - - jre:108993962 1204.12