Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00140 | GAATCTAAGACGATGGATTATAAGAGATTTGAATTGCTTTTCTGGGCTTTGTTGATTACGAGCTGGGTATGTTGTTCTACTGGGTTTACACCTGCTGACAATTATCTTATAAACTGTGGATCGAATGCTAATTCTTCAGTTGGCAGCCGTGTTTTTGTTGCTGATAATTTTTACTCGAAAGTGCTTTCTACCCCGCAAGATGTTCTTGCCAATAACAATGAGAATTCCATCTCAACTCTGTATCGAACGGCCAGAATCTTTACCGGATCCTCAAAGTACACATTTTCAATTAGTCAGAGAGGAAGACACTGGATCAGACTCTATTTCTACCCGTTTGTTTATTCCACTTATCATTTGAGTGCAGCAAAATTTTCCGTTTCTACTCAAAATAATGTTCTTTTGGGCGATTATGTCGCTTCGAATAATCCAACTGTGAAGGAATTCTCCGTAAATGTCACCTCAAGCGCACTTGTAATTGCTTTCACCCCTTCCAACGGCTCATTTGCATTCTTGAACGCCATAGAAGTAGTTTCAGTTCCTGATTGGCTGATTCCTGATGCTGCTGCTGAAACATTCAACCCATCAGGGCAATTTCAAGGATTCTCAAATCTTGCTCTCGAAACAGTTCATCGGATAAACATGGGTGGCCCGGCAGTGACTTCTGACGACGATACACTATGGCGAACTTGGATTTCTGATGCAGACCTATCAGAACCAAAAAATGGAGTTTTGAATATCTCAAATATTCCAGCCGTTAAATATGTTGCCGAAGGGTCGACAGAAGATATTGCGCCAAAACCTGTCTATGGCACTTTATCCCAGATGAACACAGTGGATGATCCGAACAGTAATTTCAATGTCAGCTGGAAGTTTGATGTGGATCCTGGATTTCTCTACCTTGTCCGGTTTCATTATTGTGACATTGTGAGTAAATCTCTTCACTCTCTGTATTTCAACGTTTATATCAATTCTTGGTTGATCGATCGGGACCTTGATCTTTCTTTGAGAATTAATGTTCTGGCTGCTCCGTACTATAGAGATGCAATTATCTCAATCGGTACCCAAAACACCGTTCGAGTCAGTATTGGTCGATCCTTTTTGGATAATGTTTATCCAAATGCAATTCTAAATGGGCTGGAGATTATGAAAATGAACAATTCTGCAGGAAGCCTCAGTGCCGAGTCCTCTATCGGTAATTCTCCCGATTCGGGTTCGAAAATACACGTGGGGGTGATTGTTGGTGCGACTGTCGGGGTGTTTGCTGTAATTTTACTGGTTGGAACTCTGTTTATGTTGGGCAGAAGAAGAAGGCAGATGCTTCTTCAGGCTCGTTCGAAGAGTTGGGTTCCATTATCGACCAACGGAGGAAACTCACTCACCATGGGAAGTAAATATTCGAATGGAACAATTGCGAGTGGGGTATCTAATTATGGGTATAGAATTCCTTTTGCAACCGTCCAAGAATGTACTAACAATTTCGACGATAGCTGGGTTATTGGGATTGGTGGGTTTGGAAAGGTCTATAAGGGAGAGTTAAGTGATGGCACAAAAGTGGCTGTTAAGAGGGGAAATCCCAAGTCTCAGCAGGGATTAGCAGAGTTTCAAACTGAAATTGAAATGCTGTCTCAATTTCGCCACCGCCATCTTGTTTCGCTGATTGGCTACTGCGATGAGCGGAATGAGATGATATTGGTTTATGAGTATATGGAAAATGGAACCTTGAAGAGTCATCTCTATGGTGCGGGACTTGCCAGTTTGAGCTGGAAGGAGAGGCTTGAGATATGCATTGGAGCAGCTAGAGGACTGCATTATCTTCACACTAGCTATGCAAAGCCGGTTATCCATCGCGATGTGAAGTCGGCAAACATATTACTTGACGAGAATCTCATGGCTAAAGTTGCTGATTTTGGACTTTCGAAAACCGGTCCTGAGATTGATCAAACCCATGTGAGTACGGCCGTGAAGGGAAGTTTTGGATATCTCGACCCTGAATATTTCAGAAGGCAGCAACTCACTGAGAAGTCCGATGTATATTCATTTGGGGTCGTTTTGTTTGAAGTAATCTGTGCTAGGCCTGTCATAGATCCATCTCTTCCTAGAGAAATGGTGAATTTAGCTGAGTGGTCAATGAAATGGCAGAAGAGAGGGCAATTGGACCAAATTATAGACTCTACTCTGGTGGGGAAAATTAAACCAGATTCACTGAGAAAGTTCGGAGAAACCGCAGAGAAATGCTTGGCTGACTATGGAGTTGACAGACCTGCCATGGGCGATGTCTTGTGGAATCTCGAGTATGCCCTTCAACTTCAACAAGCGGTGATAGAGGGCGATCCTGAAGATAACAGTACTAATATGATCGGTGAGCTGTCTCCTCAGGTCAACAATTTCAACGAATCGGATGCAAGCGTTTCAGCTACGCAATTAGAGGTTCCGGGAGTGGACGATCTTTCTGGCGTCTCAATGAGTAGGGTCTTCTCACAGTTGGTGAAATCCGAAGGTAGTGTTGAAACTCTTGGTTGTACAACTGTCATTTGTTCCGACAAAACAGGTACTTTGACAACCAATCAGATGGCTGTGGCAAAACTTGTGGCTATTGGTTCTAGACCCGGTGCTATTCGGGACTTTGATGTTGAAGGGACAACATATAATCCTTTTGATGGAAAAATACATGGCTGGCCAAATAAAATGGATGCTAATCTTCAAATGATTGCAAAGATTTCTGCTATCTGTAATGATGCTGGTGTTGAACAATCTGGAAATCATTTTGTTGCCAATGGCATGCCCACCGAAGCAGCATTGAAGGTTTTGGTGGAAAAAATGCGACTTCCTGAAGGAATTGGTTCTGGCTCACATTCTGCTCATGAGGATATACTGCGGTGCTGTCAACAATGGAAAAAAATTGAACATAGGATTGCAACACTGGAGTTCGATCGAGATCGAAAATCTATGGGAGTAATTTCTTCTTCCAGCTCAGGAAAAAATTTATTACTGGTGAAGGGCGCAGTGGAAAATGTCTTGGAGCGAAGTTCATTCATTCAGTTGCTTGATGGTTCTGTAGCAGAACTGGATGATAATTCAAAAAATGTTATCTTAGAAAGCCTTCGTGAAATGTCGACTGGTGCATTAAGATGTTTGGGTTTTGCGTATAAGGAAGAACTTGGAGAGTTTTCACAATATAACGGAGATGAAGAGCATCCTGCTCATGAGCTTTTACTTAACCCATCCAACTACTCCATGATTGAGAGTAATCTGATATTTGTTGGTTTAGTTGGGCTGAGGGATCCTCCTCGGAAAGAAGTACGTCAAGCTATCAAAGACTGCAAAGCTGCAGGAATTCGTGTCATGGTTATAACTGGAGACAACAAGAATACTGCCGAAGCTATTTGCCGTGAAATAGGTGTATTTGGATCTCATGAAAATATTGTCTCAAAAAGCTTAACTGGAAGAGAATTCATGGATATGAACCATCAAAGTCAGAAAATTCATTTGACACAAAAGGGAGGGCTCTTGTTCTCTAGGGCTGAACCTAGGCATAAACAAGAGATCGTGAGGTTGCTTAAAGAGGAAGATGAAGTTGTTGCAATGACTGGAGATGGAGTGAATGATGCACCTGCCCTTAAATTGGCAGATATTGGGATAGCCATGGGCATTGCTGGGACTGAGGTTGCAAAGGAAGCCGCTGACATGGTGCTAGCAGATGATAATTTTAGCTCTATAGTTGCTGCAGTTGGTGAAGGAAGATCAATTTACAACAATATGAAGGCATTTATCAGTTTGCCTTGCATTCTCTCCCTTATCAATTGTAAACATTTTTGCAGGTATATGATTTCGTCAAATATCGGTGAGGTTGCCTCCATATTCTTGACAGCTGCTCTAGGCATTCCTGAAGGCATGATACCTGTTCAGCTTCTCTGGGTCAACCTTGTGACAGATGGGCCTCCGGCAACAGCACTCGGTTTCAATCCTCCAGACAAAGATATAATGAAGAAACCACCAAGAAGAAGCAATGATTCATTGATTACTGCTTGGATTTTATTCCGCTATCTGGTTATTGGACTCTACGTGGGGATAGCAACAGTGGGAGTGTTTGTCATCTGGTACACACATTCCTCATTCTTAGGCATTGACTTAAGTGGGGATGGGCATAGTCTTGTTACCTACTCTCAACTTGCAAGCTGGGATCAGTGCTCTTCTTGGGAAGGATTTTCCGTCTCGCCCTACTCAGCTGGCAGCCAAGTCTTCAATTTCGACTCAAAGCCGTGCGAATACTTCAAATCCGGTAAAATTAAGGCCTCTACACTCTCTCTTTCTGTCTTGGTAGCGATCGAGATGTTCAATTCCCTGAATGCACTTTCTGAAGATGGGAGTCTTCTTACAATGCCCCCTTGGGTTAACCCTTGGCTCCTTCTCGCCATGTCCATCTCATTTGGGCTGCACTTTCTCATCCTCTACGTGCCATTCCTTGCTCAAATATTTGGCATAGTCCCTCTCAGCTTGAACGAATGGCTCTTGGTGGTGGCGGTCTCTCTTCCGGTAATTCTAATCGACGAGATTTTGAAGTTTGTGGGAAGGTTTACGAGTGGATTCAGGAATTCAACTTCGACCAAGTCTTCAAAGCGAAAGTCGGAGTAA | 4632 | 42.94 | ESKTMDYKRFELLFWALLITSWVCCSTGFTPADNYLINCGSNANSSVGSRVFVADNFYSKVLSTPQDVLANNNENSISTLYRTARIFTGSSKYTFSISQRGRHWIRLYFYPFVYSTYHLSAAKFSVSTQNNVLLGDYVASNNPTVKEFSVNVTSSALVIAFTPSNGSFAFLNAIEVVSVPDWLIPDAAAETFNPSGQFQGFSNLALETVHRINMGGPAVTSDDDTLWRTWISDADLSEPKNGVLNISNIPAVKYVAEGSTEDIAPKPVYGTLSQMNTVDDPNSNFNVSWKFDVDPGFLYLVRFHYCDIVSKSLHSLYFNVYINSWLIDRDLDLSLRINVLAAPYYRDAIISIGTQNTVRVSIGRSFLDNVYPNAILNGLEIMKMNNSAGSLSAESSIGNSPDSGSKIHVGVIVGATVGVFAVILLVGTLFMLGRRRRQMLLQARSKSWVPLSTNGGNSLTMGSKYSNGTIASGVSNYGYRIPFATVQECTNNFDDSWVIGIGGFGKVYKGELSDGTKVAVKRGNPKSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILVYEYMENGTLKSHLYGAGLASLSWKERLEICIGAARGLHYLHTSYAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVICARPVIDPSLPREMVNLAEWSMKWQKRGQLDQIIDSTLVGKIKPDSLRKFGETAEKCLADYGVDRPAMGDVLWNLEYALQLQQAVIEGDPEDNSTNMIGELSPQVNNFNESDASVSATQLEVPGVDDLSGVSMSRVFSQLVKSEGSVETLGCTTVICSDKTGTLTTNQMAVAKLVAIGSRPGAIRDFDVEGTTYNPFDGKIHGWPNKMDANLQMIAKISAICNDAGVEQSGNHFVANGMPTEAALKVLVEKMRLPEGIGSGSHSAHEDILRCCQQWKKIEHRIATLEFDRDRKSMGVISSSSSGKNLLLVKGAVENVLERSSFIQLLDGSVAELDDNSKNVILESLREMSTGALRCLGFAYKEELGEFSQYNGDEEHPAHELLLNPSNYSMIESNLIFVGLVGLRDPPRKEVRQAIKDCKAAGIRVMVITGDNKNTAEAICREIGVFGSHENIVSKSLTGREFMDMNHQSQKIHLTQKGGLLFSRAEPRHKQEIVRLLKEEDEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEAADMVLADDNFSSIVAAVGEGRSIYNNMKAFISLPCILSLINCKHFCRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSNDSLITAWILFRYLVIGLYVGIATVGVFVIWYTHSSFLGIDLSGDGHSLVTYSQLASWDQCSSWEGFSVSPYSAGSQVFNFDSKPCEYFKSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSISFGLHFLILYVPFLAQIFGIVPLSLNEWLLVVAVSLPVILIDEILKFVGRFTSGFRNSTSTKSSKRKSE | 1543 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1239187 | 1250666 | + | Bma005606.1 | Bma11g00140 | 90542 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00140 | 1543 | Pfam | haloacid dehalogenase-like hydrolase | 842 | 1210 | - | - | |
Bma11g00140 | 1543 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 847 | 853 | IPR018303 | - | |
Bma11g00140 | 1543 | Gene3D | Phosphorylase Kinase; domain 1 | 458 | 568 | - | - | |
Bma11g00140 | 1543 | SUPERFAMILY | Protein kinase-like (PK-like) | 473 | 764 | IPR011009 | - | |
Bma11g00140 | 1543 | SFLD | p-type atpase | 828 | 1248 | IPR044492 | - | |
Bma11g00140 | 1543 | Gene3D | - | 1205 | 1528 | - | - | |
Bma11g00140 | 1543 | Pfam | Protein tyrosine and serine/threonine kinase | 498 | 690 | IPR001245 | GO:0004672|GO:0006468 | |
Bma11g00140 | 1543 | PANTHER | RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED | 827 | 1542 | - | - | |
Bma11g00140 | 1543 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 852 | 1092 | IPR023299 | GO:0000166 | |
Bma11g00140 | 1543 | SUPERFAMILY | HAD-like | 843 | 1315 | IPR036412 | - | |
Bma11g00140 | 1543 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 828 | 1525 | IPR023298 | - | |
Bma11g00140 | 1543 | Pfam | Malectin-like domain | 37 | 384 | IPR024788 | - | |
Bma11g00140 | 1543 | Gene3D | - | 842 | 856 | IPR023214 | - | |
Bma11g00140 | 1543 | Gene3D | - | 828 | 841 | - | - | |
Bma11g00140 | 1543 | SFLD | C1.7: P-type atpase like | 828 | 1248 | - | - | |
Bma11g00140 | 1543 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 1170 | 1266 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma11g00140 | 1543 | ProSiteProfiles | Protein kinase domain profile. | 493 | 766 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00140 | 1543 | PRINTS | P-type cation-transporting ATPase superfamily signature | 845 | 859 | - | - | |
Bma11g00140 | 1543 | PRINTS | P-type cation-transporting ATPase superfamily signature | 1196 | 1215 | - | - | |
Bma11g00140 | 1543 | PRINTS | P-type cation-transporting ATPase superfamily signature | 1088 | 1099 | - | - | |
Bma11g00140 | 1543 | PRINTS | P-type cation-transporting ATPase superfamily signature | 1220 | 1232 | - | - | |
Bma11g00140 | 1543 | PRINTS | P-type cation-transporting ATPase superfamily signature | 1110 | 1120 | - | - | |
Bma11g00140 | 1543 | Gene3D | - | 875 | 1100 | IPR023299 | GO:0000166 | |
Bma11g00140 | 1543 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 613 | 625 | IPR008271 | GO:0004672|GO:0006468 | |
Bma11g00140 | 1543 | Gene3D | Transferase(Phosphotransferase) domain 1 | 569 | 786 | - | - | |
Bma11g00140 | 1543 | SMART | serkin_6 | 493 | 766 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00140 | 1543 | CDD | STKc_IRAK | 499 | 764 | - | - | |
Bma11g00140 | 1543 | ProSitePatterns | Protein kinases ATP-binding region signature. | 499 | 521 | IPR017441 | GO:0005524 | |
Bma11g00140 | 1543 | Pfam | Cation transporting ATPase, C-terminus | 1296 | 1522 | IPR006068 | - | |
Bma11g00140 | 1543 | Gene3D | - | 204 | 386 | - | - | |
Bma11g00140 | 1543 | Gene3D | - | 34 | 179 | - | - | |
Bma11g00140 | 1543 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 827 | 1542 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00120 | Bma11g00140 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00475 | Bma-Chr8:22724207 | Bma11g00140 | Bma-Chr11:1239187 | 3.96E-79 | dispersed | |
Bma10g00664 | Bma-Chr10:9542949 | Bma11g00140 | Bma-Chr11:1239187 | 7.70E-175 | dispersed | |
Bma11g00140 | Bma-Chr11:1239187 | Bma14g01243 | Bma-Chr14:19989117 | 0 | dispersed | |
Bma14g00362 | Bma-Chr14:4390302 | Bma11g00140 | Bma-Chr11:1239187 | 3.80E-72 | dispersed | |
Bma07g00258 | Bma-Chr7:3217795 | Bma11g00140 | Bma-Chr11:1239187 | 2.32E-33 | transposed | |
Bma09g00253 | Bma-Chr9:13010364 | Bma11g00140 | Bma-Chr11:1239187 | 0 | transposed | |
Bma14g00283 | Bma-Chr14:3579446 | Bma11g00140 | Bma-Chr11:1239187 | 0 | transposed | |
Bma14g02048 | Bma-Chr14:43846303 | Bma11g00140 | Bma-Chr11:1239187 | 8.03E-125 | transposed | |
Bma11g00140 | Bma-Chr11:1239187 | Bma07g00120 | Bma-Chr7:1932200 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66763 | PF00702 | Hydrolase | 8.50E-20 | CL0137 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00140 | - | - | jre:108993962 | 1204.12 |