Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00144 | ATGGAACATTCAGATAACTCGAACGCGAAGTCATCCTCCCACGTACCACCATTTTCGAGAGACTTCCGAGGTTCGCTCGAAGTTTTCAATCCTTCTACTTTTTCAGCTACATCCCGCCCGACGAACGCAGCCTTCCGGCCGAGCCCAACGTGGCAGAGCTGGGTCGAACCACGTGGAAGCTCGGAACCGGAAAATCTCAAGCTGTCTTCCAAATCTAGTGGGACCAATGACGAGATCACCTCATGGATGGCTCTCAAAGACCCGACCCCACATCAACAACCATCATCACCATTGGCTCACAAGACTATTGCTTCTATCATCAGCGACAAATCACCGGCGCCGGTTGCGAAACCAATTGACGAAGTCGGCAACGCAGCTCAGCGAGCCGCCGAGTGGGGTCTGGTGCTGAAAACCGATACGGAGACCGGAAAGCCCCAAGGGGTAACAGTGAGAACTTCCGGCGGAGATGAACCAAACATCGGTAAAACGGAGAAACCGAGAAGAGATTCGAATAACTCAGTCAGAAGCTCCGGGGACATGTCGGATGACGGAGGTAGAGAACGGGGGTTTCCAAGAGTGTCGGAGGATTTGAAGGATGCATTGTCAACCTTTCAGCAGACCTTCGTCGTCTCCGACGCCACGAAACCGGATTATCCAATCATGTATGCGAGCGCCGGATTTTTCAAGATGACGGGTTACGCGTCCAAAGAGGTCATCGGAAGAAACTGTCGGTTCATGCAGGGTGCGGATACGGACCCGGAAGATGTGTCGAAGATTAGGGAGGCGCTGCAGGAGGGGACGAGTTACTGCGGGAGGCTACTGAATTATAAGAAAGACGGGACGCCTTTTTGGAATTTACTTACTATTGCGCCAATTAAGGATGAGGCTGGAAAAGTCCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACTGAAGGATATAAGGATAAGATGATGCGTCCCAATGGATTGCCTGAGTCCCTGATTAGATATGATGCTCGTCAAAAAGAGATGGCCAATAATTCAGTAACTGAGCTCGTCCAGGCCGTGAATAGACCGCGGTCTCTCAGCGAGTCGACAAATCAACGGCCTTTTAGAAAGTCAGGTGGAAGTGTGGAAGAGGACAAACCAGAACCGCTTGTGAGGAGAAAATCAGAGAGTGTTGCTCCGCCGGTACGAAACTCACATGGCACTACTCGAAGATCGATGCAAAGTATAAGTGAATTGCCTGAGAAAAAACCAAGAAAATCCATCCGTCTTTCTTTCATGGGGATGATTCGGAAAAATCAACAGAGCAGTGAAAGCTTTGAAGATGGGATAAATGTGGATTTTGAGGAGAGTGATAATGATGATGATGATGATGATGAAAGGCCTGACAGTTTGGATGACAAAGTTAGGCAGAGGCAAATGAGAAAGGGTCTTGATCTTGCTACAACCCTTGAACGTATTGAGAAGAACTTCGTCATTACTGATCCGAGGCTGCCTGATAATCCCATTATTTTTGCTTCTGATAGCTTCCTGGAGCTGACGGAGTACAGCCGAGAAGAAATCTTGGGACGAAATTGCAGGTTCTTACAAGGGCCAGAGACTGATCCAGTGACTGTTAGGAAAATAAGAGACGCCATTGACAATCAAACTGAAGTTACTGTGCAGCTCATCAACTACACAAAGAGCGGGAAAAAATTCTGGAATCTATTTCATCTACAACCTATGCGTGACCAAAAGGGTGAAGTTCAGTACTTCATTGGAGTTCAATTAGATGGTAGTCAACACGTGGAGCCGCTTAAAAATTGTATTCCAGACGATACCGCACAAGAGAGTGAAAAATTGGTGAGAGAAACCGCAGAAAATGTAGATGTGGCGGTCAGAGAACTTCCCGATGCCAACATGAAACCGGAAGATTTATGGATGAATCACTCCAAAGTTGTTCATCCAAAACCTCACCGGAAAGGAACTCCATCTTGGAAAGCCATACAGAAGATTCTAGATAGTGGCGAGGAGATAGGCTTGAAACATTTTAGGCCAGTTAAGCCCTTAGGATCTGGCGATACCGGCAGTGTGCATCTGGTGGAATTGTACGGTACTGGTCAGTTCTTTGCTATGAAGGCCATGGATAAGAGTGTTATGCTTAATCGAAACAAAGTGCATAGAGCTTGTGCAGAGAGAGAAATTCTCGACCTGTTGGACCATCCGTTTCTACCTGCTTTGTATGCTTCTTTTCAGACAAAAACACATGTTTGTCTGATAACTGATTACTGCCCCGGCGGAGAACTTTTCATGCTTCTGGACCGACAACCGGCAAAGGTTATAAAGGAAGATGCCGTCAGATTTTATGCTGCAGAAGTTGTTATTGCCTTGGAGTATCTCCACTGTCAAGGTATAATCTACAGGGACTTGAAGCCTGAAAATGTGCTACTCCAGGGTAATGGCCACGTCTCCTTGACGGATTTCGATTTGTCCTGTCTGACTTCCTGCAAACCTCAGCTTTTGATGCCCGCTACAAATGAGAAGAAAAAGCATAAGAAAACTCAACAACCTCCTATCTTCATGGCCGAACCGATAAGAGCATCTAATTCTTTCGTTGGCACGGAGGAATACATCGCTCCTTTCCTGCAGGAAATCATAACTGGTGCAGGCCATACTAGTGCTGTGGACTGGTGGGCACTGGGTATTCTTCTATATGAGATGCTGTACGGATATACGCCATTTAGGGGTAAGACAAGGCAGAAAACGTTTGCCAATATTCTGCAGAAGGATATAAAATTTCCCAGAAGCATACAAGTTAGTCTCAGTTGCAAGCAGTTAATGTACAGATTATTACACAGGGATCCGAAAAATCGATTGGGTTCGAGGGAAGGAACGAGTGAAATCAAGTGTCACCCTTTCTTCCGCGATATAAATTGGGCACTCATTCGATCCATGAATTCTCCCGAGCTCGAGGCTCCGCTTTTTGACTCTAAAGAAGCCGACAACAATGTTAAAGACATCGATCCCGCGCTAGATGATCTACAAGTCAATGTTTTCTGA | 3033 | 46.46 | MEHSDNSNAKSSSHVPPFSRDFRGSLEVFNPSTFSATSRPTNAAFRPSPTWQSWVEPRGSSEPENLKLSSKSSGTNDEITSWMALKDPTPHQQPSSPLAHKTIASIISDKSPAPVAKPIDEVGNAAQRAAEWGLVLKTDTETGKPQGVTVRTSGGDEPNIGKTEKPRRDSNNSVRSSGDMSDDGGRERGFPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYASKEVIGRNCRFMQGADTDPEDVSKIREALQEGTSYCGRLLNYKKDGTPFWNLLTIAPIKDEAGKVLKFIGMQVEVSKHTEGYKDKMMRPNGLPESLIRYDARQKEMANNSVTELVQAVNRPRSLSESTNQRPFRKSGGSVEEDKPEPLVRRKSESVAPPVRNSHGTTRRSMQSISELPEKKPRKSIRLSFMGMIRKNQQSSESFEDGINVDFEESDNDDDDDDERPDSLDDKVRQRQMRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPVTVRKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLKNCIPDDTAQESEKLVRETAENVDVAVRELPDANMKPEDLWMNHSKVVHPKPHRKGTPSWKAIQKILDSGEEIGLKHFRPVKPLGSGDTGSVHLVELYGTGQFFAMKAMDKSVMLNRNKVHRACAEREILDLLDHPFLPALYASFQTKTHVCLITDYCPGGELFMLLDRQPAKVIKEDAVRFYAAEVVIALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLMPATNEKKKHKKTQQPPIFMAEPIRASNSFVGTEEYIAPFLQEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILQKDIKFPRSIQVSLSCKQLMYRLLHRDPKNRLGSREGTSEIKCHPFFRDINWALIRSMNSPELEAPLFDSKEADNNVKDIDPALDDLQVNVF | 1010 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1284540 | 1291387 | - | Bma005611.1 | Bma11g00144 | 90546 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 26 | 100 | - | - | |
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 426 | 440 | - | - | |
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 370 | 385 | - | - | |
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 1 | 100 | - | - | |
Bma11g00144 | 1010 | SUPERFAMILY | Protein kinase-like (PK-like) | 656 | 987 | IPR011009 | - | |
Bma11g00144 | 1010 | ProSiteProfiles | PAS repeat profile. | 193 | 265 | IPR000014 | - | |
Bma11g00144 | 1010 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 796 | 808 | IPR008271 | GO:0004672|GO:0006468 | |
Bma11g00144 | 1010 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 214 | 306 | IPR035965 | - | |
Bma11g00144 | 1010 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 490 | 589 | IPR035965 | - | |
Bma11g00144 | 1010 | Pfam | PAS domain | 497 | 589 | IPR000014 | - | |
Bma11g00144 | 1010 | Pfam | PAS domain | 214 | 310 | IPR000014 | - | |
Bma11g00144 | 1010 | CDD | PAS | 220 | 309 | IPR000014 | - | |
Bma11g00144 | 1010 | ProSiteProfiles | PAC domain profile. | 267 | 321 | IPR000700 | - | |
Bma11g00144 | 1010 | PANTHER | PHOTOTROPIN-1 | 141 | 1010 | - | - | |
Bma11g00144 | 1010 | SMART | serkin_6 | 675 | 965 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 158 | 172 | - | - | |
Bma11g00144 | 1010 | Gene3D | PAS domain | 207 | 364 | - | - | |
Bma11g00144 | 1010 | PANTHER | FLIPPASE KINASE 1-RELATED | 141 | 1010 | - | - | |
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 351 | 369 | - | - | |
Bma11g00144 | 1010 | SMART | pac_2 | 270 | 312 | IPR001610 | - | |
Bma11g00144 | 1010 | SMART | pac_2 | 551 | 593 | IPR001610 | - | |
Bma11g00144 | 1010 | ProSiteProfiles | PAS repeat profile. | 474 | 547 | IPR000014 | - | |
Bma11g00144 | 1010 | CDD | STKc_phototropin_like | 673 | 984 | - | - | |
Bma11g00144 | 1010 | ProSiteProfiles | Protein kinase domain profile. | 675 | 965 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00144 | 1010 | ProSitePatterns | Protein kinases ATP-binding region signature. | 681 | 704 | IPR017441 | GO:0005524 | |
Bma11g00144 | 1010 | Pfam | Protein kinase domain | 678 | 965 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00144 | 1010 | ProSiteProfiles | PAC domain profile. | 548 | 602 | IPR000700 | - | |
Bma11g00144 | 1010 | SMART | pas_2 | 476 | 545 | IPR000014 | - | |
Bma11g00144 | 1010 | SMART | pas_2 | 195 | 265 | IPR000014 | - | |
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 351 | 470 | - | - | |
Bma11g00144 | 1010 | Gene3D | Transferase(Phosphotransferase) domain 1 | 759 | 985 | - | - | |
Bma11g00144 | 1010 | Gene3D | Phosphorylase Kinase; domain 1 | 674 | 988 | - | - | |
Bma11g00144 | 1010 | CDD | PAS | 489 | 589 | IPR000014 | - | |
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 393 | 407 | - | - | |
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 441 | 460 | - | - | |
Bma11g00144 | 1010 | Gene3D | PAS domain | 462 | 627 | - | - | |
Bma11g00144 | 1010 | TIGRFAM | sensory_box: PAS domain S-box protein | 499 | 589 | IPR000014 | - | |
Bma11g00144 | 1010 | TIGRFAM | sensory_box: PAS domain S-box protein | 220 | 313 | IPR000014 | - | |
Bma11g00144 | 1010 | MobiDBLite | consensus disorder prediction | 136 | 191 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00121 | Bma11g00144 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00074 | Bma-Chr7:1538350 | Bma11g00144 | Bma-Chr11:1284540 | 0 | dispersed | |
Bma11g00144 | Bma-Chr11:1284540 | Bma06g01369 | Bma-Chr6:50522493 | 2.03E-105 | dispersed | |
Bma08g00703 | Bma-Chr8:42687325 | Bma11g00144 | Bma-Chr11:1284540 | 0 | transposed | |
Bma12g00892 | Bma-Chr12:40248529 | Bma11g00144 | Bma-Chr11:1284540 | 0 | transposed | |
Bma11g00144 | Bma-Chr11:1284540 | Bma07g00121 | Bma-Chr7:1949041 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66764 | PF00069 | Pkinase | 2.40E-60 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00144 | K20715 | - | jre:108989640 | 1590.47 |