Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00144 ATGGAACATTCAGATAACTCGAACGCGAAGTCATCCTCCCACGTACCACCATTTTCGAGAGACTTCCGAGGTTCGCTCGAAGTTTTCAATCCTTCTACTTTTTCAGCTACATCCCGCCCGACGAACGCAGCCTTCCGGCCGAGCCCAACGTGGCAGAGCTGGGTCGAACCACGTGGAAGCTCGGAACCGGAAAATCTCAAGCTGTCTTCCAAATCTAGTGGGACCAATGACGAGATCACCTCATGGATGGCTCTCAAAGACCCGACCCCACATCAACAACCATCATCACCATTGGCTCACAAGACTATTGCTTCTATCATCAGCGACAAATCACCGGCGCCGGTTGCGAAACCAATTGACGAAGTCGGCAACGCAGCTCAGCGAGCCGCCGAGTGGGGTCTGGTGCTGAAAACCGATACGGAGACCGGAAAGCCCCAAGGGGTAACAGTGAGAACTTCCGGCGGAGATGAACCAAACATCGGTAAAACGGAGAAACCGAGAAGAGATTCGAATAACTCAGTCAGAAGCTCCGGGGACATGTCGGATGACGGAGGTAGAGAACGGGGGTTTCCAAGAGTGTCGGAGGATTTGAAGGATGCATTGTCAACCTTTCAGCAGACCTTCGTCGTCTCCGACGCCACGAAACCGGATTATCCAATCATGTATGCGAGCGCCGGATTTTTCAAGATGACGGGTTACGCGTCCAAAGAGGTCATCGGAAGAAACTGTCGGTTCATGCAGGGTGCGGATACGGACCCGGAAGATGTGTCGAAGATTAGGGAGGCGCTGCAGGAGGGGACGAGTTACTGCGGGAGGCTACTGAATTATAAGAAAGACGGGACGCCTTTTTGGAATTTACTTACTATTGCGCCAATTAAGGATGAGGCTGGAAAAGTCCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACTGAAGGATATAAGGATAAGATGATGCGTCCCAATGGATTGCCTGAGTCCCTGATTAGATATGATGCTCGTCAAAAAGAGATGGCCAATAATTCAGTAACTGAGCTCGTCCAGGCCGTGAATAGACCGCGGTCTCTCAGCGAGTCGACAAATCAACGGCCTTTTAGAAAGTCAGGTGGAAGTGTGGAAGAGGACAAACCAGAACCGCTTGTGAGGAGAAAATCAGAGAGTGTTGCTCCGCCGGTACGAAACTCACATGGCACTACTCGAAGATCGATGCAAAGTATAAGTGAATTGCCTGAGAAAAAACCAAGAAAATCCATCCGTCTTTCTTTCATGGGGATGATTCGGAAAAATCAACAGAGCAGTGAAAGCTTTGAAGATGGGATAAATGTGGATTTTGAGGAGAGTGATAATGATGATGATGATGATGATGAAAGGCCTGACAGTTTGGATGACAAAGTTAGGCAGAGGCAAATGAGAAAGGGTCTTGATCTTGCTACAACCCTTGAACGTATTGAGAAGAACTTCGTCATTACTGATCCGAGGCTGCCTGATAATCCCATTATTTTTGCTTCTGATAGCTTCCTGGAGCTGACGGAGTACAGCCGAGAAGAAATCTTGGGACGAAATTGCAGGTTCTTACAAGGGCCAGAGACTGATCCAGTGACTGTTAGGAAAATAAGAGACGCCATTGACAATCAAACTGAAGTTACTGTGCAGCTCATCAACTACACAAAGAGCGGGAAAAAATTCTGGAATCTATTTCATCTACAACCTATGCGTGACCAAAAGGGTGAAGTTCAGTACTTCATTGGAGTTCAATTAGATGGTAGTCAACACGTGGAGCCGCTTAAAAATTGTATTCCAGACGATACCGCACAAGAGAGTGAAAAATTGGTGAGAGAAACCGCAGAAAATGTAGATGTGGCGGTCAGAGAACTTCCCGATGCCAACATGAAACCGGAAGATTTATGGATGAATCACTCCAAAGTTGTTCATCCAAAACCTCACCGGAAAGGAACTCCATCTTGGAAAGCCATACAGAAGATTCTAGATAGTGGCGAGGAGATAGGCTTGAAACATTTTAGGCCAGTTAAGCCCTTAGGATCTGGCGATACCGGCAGTGTGCATCTGGTGGAATTGTACGGTACTGGTCAGTTCTTTGCTATGAAGGCCATGGATAAGAGTGTTATGCTTAATCGAAACAAAGTGCATAGAGCTTGTGCAGAGAGAGAAATTCTCGACCTGTTGGACCATCCGTTTCTACCTGCTTTGTATGCTTCTTTTCAGACAAAAACACATGTTTGTCTGATAACTGATTACTGCCCCGGCGGAGAACTTTTCATGCTTCTGGACCGACAACCGGCAAAGGTTATAAAGGAAGATGCCGTCAGATTTTATGCTGCAGAAGTTGTTATTGCCTTGGAGTATCTCCACTGTCAAGGTATAATCTACAGGGACTTGAAGCCTGAAAATGTGCTACTCCAGGGTAATGGCCACGTCTCCTTGACGGATTTCGATTTGTCCTGTCTGACTTCCTGCAAACCTCAGCTTTTGATGCCCGCTACAAATGAGAAGAAAAAGCATAAGAAAACTCAACAACCTCCTATCTTCATGGCCGAACCGATAAGAGCATCTAATTCTTTCGTTGGCACGGAGGAATACATCGCTCCTTTCCTGCAGGAAATCATAACTGGTGCAGGCCATACTAGTGCTGTGGACTGGTGGGCACTGGGTATTCTTCTATATGAGATGCTGTACGGATATACGCCATTTAGGGGTAAGACAAGGCAGAAAACGTTTGCCAATATTCTGCAGAAGGATATAAAATTTCCCAGAAGCATACAAGTTAGTCTCAGTTGCAAGCAGTTAATGTACAGATTATTACACAGGGATCCGAAAAATCGATTGGGTTCGAGGGAAGGAACGAGTGAAATCAAGTGTCACCCTTTCTTCCGCGATATAAATTGGGCACTCATTCGATCCATGAATTCTCCCGAGCTCGAGGCTCCGCTTTTTGACTCTAAAGAAGCCGACAACAATGTTAAAGACATCGATCCCGCGCTAGATGATCTACAAGTCAATGTTTTCTGA 3033 46.46 MEHSDNSNAKSSSHVPPFSRDFRGSLEVFNPSTFSATSRPTNAAFRPSPTWQSWVEPRGSSEPENLKLSSKSSGTNDEITSWMALKDPTPHQQPSSPLAHKTIASIISDKSPAPVAKPIDEVGNAAQRAAEWGLVLKTDTETGKPQGVTVRTSGGDEPNIGKTEKPRRDSNNSVRSSGDMSDDGGRERGFPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYASKEVIGRNCRFMQGADTDPEDVSKIREALQEGTSYCGRLLNYKKDGTPFWNLLTIAPIKDEAGKVLKFIGMQVEVSKHTEGYKDKMMRPNGLPESLIRYDARQKEMANNSVTELVQAVNRPRSLSESTNQRPFRKSGGSVEEDKPEPLVRRKSESVAPPVRNSHGTTRRSMQSISELPEKKPRKSIRLSFMGMIRKNQQSSESFEDGINVDFEESDNDDDDDDERPDSLDDKVRQRQMRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPVTVRKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLKNCIPDDTAQESEKLVRETAENVDVAVRELPDANMKPEDLWMNHSKVVHPKPHRKGTPSWKAIQKILDSGEEIGLKHFRPVKPLGSGDTGSVHLVELYGTGQFFAMKAMDKSVMLNRNKVHRACAEREILDLLDHPFLPALYASFQTKTHVCLITDYCPGGELFMLLDRQPAKVIKEDAVRFYAAEVVIALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLMPATNEKKKHKKTQQPPIFMAEPIRASNSFVGTEEYIAPFLQEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILQKDIKFPRSIQVSLSCKQLMYRLLHRDPKNRLGSREGTSEIKCHPFFRDINWALIRSMNSPELEAPLFDSKEADNNVKDIDPALDDLQVNVF 1010
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1284540 1291387 - Bma005611.1 Bma11g00144 90546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00144 1010 MobiDBLite consensus disorder prediction 26 100 - -
Bma11g00144 1010 MobiDBLite consensus disorder prediction 426 440 - -
Bma11g00144 1010 MobiDBLite consensus disorder prediction 370 385 - -
Bma11g00144 1010 MobiDBLite consensus disorder prediction 1 100 - -
Bma11g00144 1010 SUPERFAMILY Protein kinase-like (PK-like) 656 987 IPR011009 -
Bma11g00144 1010 ProSiteProfiles PAS repeat profile. 193 265 IPR000014 -
Bma11g00144 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Bma11g00144 1010 SUPERFAMILY PYP-like sensor domain (PAS domain) 214 306 IPR035965 -
Bma11g00144 1010 SUPERFAMILY PYP-like sensor domain (PAS domain) 490 589 IPR035965 -
Bma11g00144 1010 Pfam PAS domain 497 589 IPR000014 -
Bma11g00144 1010 Pfam PAS domain 214 310 IPR000014 -
Bma11g00144 1010 CDD PAS 220 309 IPR000014 -
Bma11g00144 1010 ProSiteProfiles PAC domain profile. 267 321 IPR000700 -
Bma11g00144 1010 PANTHER PHOTOTROPIN-1 141 1010 - -
Bma11g00144 1010 SMART serkin_6 675 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00144 1010 MobiDBLite consensus disorder prediction 158 172 - -
Bma11g00144 1010 Gene3D PAS domain 207 364 - -
Bma11g00144 1010 PANTHER FLIPPASE KINASE 1-RELATED 141 1010 - -
Bma11g00144 1010 MobiDBLite consensus disorder prediction 351 369 - -
Bma11g00144 1010 SMART pac_2 270 312 IPR001610 -
Bma11g00144 1010 SMART pac_2 551 593 IPR001610 -
Bma11g00144 1010 ProSiteProfiles PAS repeat profile. 474 547 IPR000014 -
Bma11g00144 1010 CDD STKc_phototropin_like 673 984 - -
Bma11g00144 1010 ProSiteProfiles Protein kinase domain profile. 675 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00144 1010 ProSitePatterns Protein kinases ATP-binding region signature. 681 704 IPR017441 GO:0005524
Bma11g00144 1010 Pfam Protein kinase domain 678 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00144 1010 ProSiteProfiles PAC domain profile. 548 602 IPR000700 -
Bma11g00144 1010 SMART pas_2 476 545 IPR000014 -
Bma11g00144 1010 SMART pas_2 195 265 IPR000014 -
Bma11g00144 1010 MobiDBLite consensus disorder prediction 351 470 - -
Bma11g00144 1010 Gene3D Transferase(Phosphotransferase) domain 1 759 985 - -
Bma11g00144 1010 Gene3D Phosphorylase Kinase; domain 1 674 988 - -
Bma11g00144 1010 CDD PAS 489 589 IPR000014 -
Bma11g00144 1010 MobiDBLite consensus disorder prediction 393 407 - -
Bma11g00144 1010 MobiDBLite consensus disorder prediction 441 460 - -
Bma11g00144 1010 Gene3D PAS domain 462 627 - -
Bma11g00144 1010 TIGRFAM sensory_box: PAS domain S-box protein 499 589 IPR000014 -
Bma11g00144 1010 TIGRFAM sensory_box: PAS domain S-box protein 220 313 IPR000014 -
Bma11g00144 1010 MobiDBLite consensus disorder prediction 136 191 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00121 Bma11g00144 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00074 Bma-Chr7:1538350 Bma11g00144 Bma-Chr11:1284540 0 dispersed
Bma11g00144 Bma-Chr11:1284540 Bma06g01369 Bma-Chr6:50522493 2.03E-105 dispersed
Bma08g00703 Bma-Chr8:42687325 Bma11g00144 Bma-Chr11:1284540 0 transposed
Bma12g00892 Bma-Chr12:40248529 Bma11g00144 Bma-Chr11:1284540 0 transposed
Bma11g00144 Bma-Chr11:1284540 Bma07g00121 Bma-Chr7:1949041 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66764 PF00069 Pkinase 2.40E-60 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00144 K20715 - jre:108989640 1590.47