Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00145 ATGGGTTGCTTTCGTTGCATCGGAAGCTCAAGCGTACGATCAGATAACGATAACAAAAGTCGCAGAAACAATCGCAACAGCAAGACCATTAATCCAAGTGATCAAAATGCTCCTGATATGGTAAATGTTGATAAGAACTTGTACGAGGCGGATGGGGCTTCTAAGGATGACCAGTTAGCCATGGATGTCAAGGGACTGAATATGGAGGATGAAATTTCCAAGGATGGAAAAGTCAAAGGAAACCGAGCTCAGACATTTTCATTCTTAGAGCTAACTGCTGCAACTGGAAATTTTAGGTCAGATTGTTTTCTTGGAGAAGGAGGATTTGGAAAAGTCTACAAGGGGTACATTGAGGGAATAAACCAGGTCGTTGCTATCAAACAACTAGACCGAAATGGTCATCAAGGAATTCGAGAATTTGTGGTTGAAATCATAACATTAAGTATGGCTGACCACCCGAATCTCGTAAAACTATTGGGTTTTTGTGCTGAGGAGGATCAAAGACTACTGGTTTATGAATACATGCCACTGGGATCGTTAGAGAATCATTTGCATGATATTCCACCTGGTGGAAAAGTACTTGATTGGCAGACAAGAATGAAAATAGCTGCTGGAGCAGCTAGAGGTCTTGAGTATTTGCATGAAAAAATGAAGCCCCCGGTTATATACCGTGATCTAAAATGTTCGAACATTTTGCTTGGCGAGGAATATTATCCGAAGCTATCTGATTTTGGATTGGCTAAAGTCGGCCCTAGTGGAGATAATACTCATGTTTCTACTAGAGTAATGGGAACTTATGGGTATTGTGCTCCTGATTATGCAATGACAGGTCAACTTACATTCAAATCAGATATTTACAGCTTTGGAGTTGTCCTTTTGGAACTCATAACTGGCAGGAAAGCAATTGATCAAACAAAGCCTCCAAAAGAACAAAACTTGGTAGCATGGGCACGGCCATTGTTTAGAGACAGAAAGAAGTTCTCACTGATGGTAGATCCAAAACTTGAAGGCCAATATCCTGTGAGAGGATTGTACCAAGCACTGGCTATTGCTGCAATGTGCGTTCAAGAGCAGCCTAATATGCGGCCTGTCGTGAAAGATGTGGTTACTGCTCTAAATTACCTTGCTTCCCAGAAATACGATCCCATCGTCGATTCGCTCAAAAGTCCCTGTTCGCCGAGACTAAAAAGAGACAATGATAGAGGCGGTATTGCAGCTGATGCTAATTGA 1230 41.87 MGCFRCIGSSSVRSDNDNKSRRNNRNSKTINPSDQNAPDMVNVDKNLYEADGASKDDQLAMDVKGLNMEDEISKDGKVKGNRAQTFSFLELTAATGNFRSDCFLGEGGFGKVYKGYIEGINQVVAIKQLDRNGHQGIREFVVEIITLSMADHPNLVKLLGFCAEEDQRLLVYEYMPLGSLENHLHDIPPGGKVLDWQTRMKIAAGAARGLEYLHEKMKPPVIYRDLKCSNILLGEEYYPKLSDFGLAKVGPSGDNTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKPPKEQNLVAWARPLFRDRKKFSLMVDPKLEGQYPVRGLYQALAIAAMCVQEQPNMRPVVKDVVTALNYLASQKYDPIVDSLKSPCSPRLKRDNDRGGIAADAN 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1296638 1299072 - Bma005612.1 Bma11g00145 90547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00145 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Bma11g00145 409 Gene3D Transferase(Phosphotransferase) domain 1 175 388 - -
Bma11g00145 409 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Bma11g00145 409 MobiDBLite consensus disorder prediction 1 40 - -
Bma11g00145 409 MobiDBLite consensus disorder prediction 25 40 - -
Bma11g00145 409 SUPERFAMILY Protein kinase-like (PK-like) 84 393 IPR011009 -
Bma11g00145 409 ProSiteProfiles Protein kinase domain profile. 98 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00145 409 SMART serkin_6 98 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00145 409 Pfam Protein kinase domain 103 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00145 409 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 387 - -
Bma11g00145 409 Gene3D Phosphorylase Kinase; domain 1 68 174 - -
Bma11g00145 409 PANTHER OS07G0668900 PROTEIN 1 387 - -
Bma11g00145 409 CDD STKc_IRAK 104 373 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01515 Bma11g00145 CCT
Bma07g01515 Bma11g00145 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01114 Bma-Chr4:26259746 Bma11g00145 Bma-Chr11:1296638 1.14E-171 dispersed
Bma11g00145 Bma-Chr11:1296638 Bma15g00679 Bma-Chr15:11162224 1.26E-148 dispersed
Bma01g01906 Bma-Chr1:70289296 Bma11g00145 Bma-Chr11:1296638 1.42E-141 wgd
Bma11g00145 Bma-Chr11:1296638 Bma07g01515 Bma-Chr7:50773043 7.54E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66765 PF00069 Pkinase 1.30E-44 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00145 - - bhj:120083806 617.846