Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00157 | AGAGTGAAAGCAAAGATGGGGAAAAGAGCAGAGTTTTTGGTGGCGTTGATCGTGCTGAGCTATGGATTCGTTGGGATGGTTTCTGGGCATTTCGAAGAAGATGAAGATTGGAGGAAAGGAAGATCAACGGAGGACTGGTTTTTGCTGCATGAAAGTAAGCATGTGATGAAGACGGAAGCGGGGGAGATGAAGGTGGTGAGAGGGTCTACGTCCAGAGTTCTTGACAGGCCCATGCACGTTGGTTTCATAAACATGGAACCCAGAAGTCTGTTCATCCCCCAGTATCTCGACTCCAGCTTAATCCTCTTCGTCCGCAGAGGAGAAGCGAAGGTGGGATTCGTGCAACACAGAGATGAGCTGGAGGAGAAGCGGTTGAGGAGAGGCGATGTTTACAGAATCCCAGCTGGTTCAGTTTTCTACTTGGTCAATACCGGAGAAGGACAGAGACTTCAAATAGTTTGCAGTATCGATTCATCGGAAAGCTTGGGAGTTGGTCCTTTCCAGTCGTTCTTCGTCGCCGGGGGAAAATATCCGACCTCCATTCTTGCCGGTTTCGAAACCCAAACCCTTGCTACAGCATTTAACGTCTCGCATGAAGATATGAAGAAGATGCTAACCAGACAACAGGACGGTCCGATCGTCTACGTCGGCGATTCTCACCCACCAAGCATTTGGCAAAAGTTCCTGCAGCTCAAAGAAGAAGACAGACTGAATCAGCTGAATAAAATGGCGGAATTCGATGAGGACTCTGAACAAGAAGAAAAGCAAACTACGTGGTCATGGAGGAAACTTATAACTTCTGAATTTGGGGATGAGAAACGAGAAGGTCAGAAAAAGAAATCCAGAAAGTCAACGGATTCTTGCAACATCTACGACCGACGACCGGACTTCAGAAACAACTACGGTACGAGCGTAACTATCGATGAATCCGATTACTCCCCGCTGAAAAACTCCGGCGTCGGGATTTACCACGTCAATCTCACTGCGGGATCGATGATGGCGCCGCACGTAAACCCGGCGGCCATGGAGTTCGGAATCGTTCTGAAAGGCTGCGGTAGGATTCAGATCGTGTTTCCAAACGGCAGTTTGGCTATGGATGCAGAAGTAAAAGAAGGAAACGTGTTCTTGATTCCGAGGTATTTCCCGTTCTGTCAAATCGCATCAAGAAGCGGACCCTTCGAGTTCTTCGGATTCACGACCTCAGAAAGGAAGAATCGTCCACAGTTCATGGTGGGTGCAAACTCGGTTCTGCAGACTCTCCGCGGTCCGGAGCTGGCGGCGGCGTTCGGGGTGAGCGAGGAGAGGATGGAGAGATTCCTGGATGCGCAGAGTGAAGCGGTGATACTGCCCAGTGCCGAGGTTGCTCCGCCGCACAGGGAGGAGGAGAAGGAGGAATTTGCGGAAGAGAAGGTACACATTAACATCGTGGTCATTGGCCATGTCGACTCTGGCAAGTCGACCACCACAGGTCACTTGATTTACAAGCTAGGAGGAATTGACAAGAGAGTGATTGAGAGGTTCGAGAAGGAGGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGTTAGACAAGCTCAAGGCTGAGCGGGAGCGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACTGTCATCGATGCTCCTGGACATCGGGATTTTATCAAAAACATGATTACAGGCACCTCCCAAGCTGACTGTGCTGTGCTTATTATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGTCAGACCCGTGAGCATGCTTTGCTTGCTTTCACTCTTGGTGTGAAGCAGATGATCTGCTGCTGCAACAAGATGGATGCCACTACACCCAAGTACTCGAAGGGAAGATATGATGAAATAGTGAAGGAAGTGTCATCTTATCTCAAAAAGGTTGGTTACAACCCGGAAAAGATCCCTTTTGTACCCATCTCTGGTTTTGAGGGAGACAACATGATTGAGAGGTCGACCAACCTCGACTGGTACAAGGGTCCTACCCTCCTGGATGCCCTTGACCTGATCTTGGAACCGAAGAGGCCTTCAGACAAGCCTCTGCGTCTCCCTCTTCAGGACGTATACAAGATCGGCGGTATTGGAACCGTGCCCGTTGGACGGGTTGAGACTGGTGTTGTGAAGCCTGGAATGGTGGTGACTTTTGGCCCCACTGGACTGACAACTGAAGTTAAGTCTGTTGAGATGCACCATGAGGCTCTCCAGGAAGCTCTTCCAGGTGATAATGTGGGTTTCAACGTGAAGAACGTTGCTGTGAAGGATCTGAAGCGTGGTTTTGTTGCTTCCAACTCCAAGGATGATCCTGCCAGGGAAGCTGCCAACTTCACCTCTCAGGTGATCATCATGAACCATCCAGGCCAGATTGGCAACGGCTATGCACCAGTGCTTGATTGCCACACCTGCCACATTGCTGTGAAATTTGCCGAGATCTTGACCAAGATCGACAGACGATCTGGAAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAACGGAGATGCAGGAATGGTGAAGATGGTTCCGACCAAGCCCATGGTGGTGGAGACATTCTCTGAGTACCCTCCTCTTGGTCGTTTTGCTGTGAGAGACATGCGTCAGACTGTGGCCGTCGGAGTTATTAAGAGCGTGGAGAAGAAGGATCCATCAGGTGCCAAGGTCACCAAGTCAGCAGCCAAGAAGGGTGGAAAATGA | 2745 | 49.98 | RVKAKMGKRAEFLVALIVLSYGFVGMVSGHFEEDEDWRKGRSTEDWFLLHESKHVMKTEAGEMKVVRGSTSRVLDRPMHVGFINMEPRSLFIPQYLDSSLILFVRRGEAKVGFVQHRDELEEKRLRRGDVYRIPAGSVFYLVNTGEGQRLQIVCSIDSSESLGVGPFQSFFVAGGKYPTSILAGFETQTLATAFNVSHEDMKKMLTRQQDGPIVYVGDSHPPSIWQKFLQLKEEDRLNQLNKMAEFDEDSEQEEKQTTWSWRKLITSEFGDEKREGQKKKSRKSTDSCNIYDRRPDFRNNYGTSVTIDESDYSPLKNSGVGIYHVNLTAGSMMAPHVNPAAMEFGIVLKGCGRIQIVFPNGSLAMDAEVKEGNVFLIPRYFPFCQIASRSGPFEFFGFTTSERKNRPQFMVGANSVLQTLRGPELAAAFGVSEERMERFLDAQSEAVILPSAEVAPPHREEEKEEFAEEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYDEIVKEVSSYLKKVGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDLILEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK | 914 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1435075 | 1442467 | + | Bma005625.1 | Bma11g00157 | 90559 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00157 | 914 | CDD | EF1_alpha_III | 788 | 891 | - | - | |
Bma11g00157 | 914 | PANTHER | TRANSLATION FACTOR | 468 | 912 | - | - | |
Bma11g00157 | 914 | Hamap | Elongation factor Tu [tuf]. | 467 | 897 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 | |
Bma11g00157 | 914 | Gene3D | Jelly Rolls | 279 | 452 | IPR014710 | - | |
Bma11g00157 | 914 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 470 | 695 | IPR000795 | GO:0003924|GO:0005525 | |
Bma11g00157 | 914 | SUPERFAMILY | Translation proteins | 696 | 786 | IPR009000 | - | |
Bma11g00157 | 914 | MobiDBLite | consensus disorder prediction | 271 | 290 | - | - | |
Bma11g00157 | 914 | Gene3D | Jelly Rolls | 41 | 227 | IPR014710 | - | |
Bma11g00157 | 914 | SUPERFAMILY | RmlC-like cupins | 51 | 446 | IPR011051 | - | |
Bma11g00157 | 914 | PRINTS | GTP-binding elongation factor signature | 533 | 541 | IPR000795 | GO:0003924|GO:0005525 | |
Bma11g00157 | 914 | PRINTS | GTP-binding elongation factor signature | 569 | 580 | IPR000795 | GO:0003924|GO:0005525 | |
Bma11g00157 | 914 | PRINTS | GTP-binding elongation factor signature | 553 | 563 | IPR000795 | GO:0003924|GO:0005525 | |
Bma11g00157 | 914 | PRINTS | GTP-binding elongation factor signature | 613 | 622 | IPR000795 | GO:0003924|GO:0005525 | |
Bma11g00157 | 914 | PRINTS | GTP-binding elongation factor signature | 474 | 487 | IPR000795 | GO:0003924|GO:0005525 | |
Bma11g00157 | 914 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 468 | 714 | IPR027417 | - | |
Bma11g00157 | 914 | Pfam | Cupin | 51 | 200 | IPR006045 | - | |
Bma11g00157 | 914 | Pfam | Cupin | 289 | 435 | IPR006045 | - | |
Bma11g00157 | 914 | CDD | cupin_7S_vicilin-like_N | 55 | 216 | - | - | |
Bma11g00157 | 914 | CDD | EF1_alpha_II | 695 | 785 | - | - | |
Bma11g00157 | 914 | Pfam | Elongation factor Tu C-terminal domain | 787 | 894 | IPR004160 | - | |
Bma11g00157 | 914 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 526 | 541 | IPR031157 | - | |
Bma11g00157 | 914 | PANTHER | ELONGATION FACTOR 1-ALPHA-LIKE | 468 | 912 | - | - | |
Bma11g00157 | 914 | Gene3D | - | 457 | 692 | IPR027417 | - | |
Bma11g00157 | 914 | CDD | cupin_7S_vicilin-like_C | 295 | 446 | - | - | |
Bma11g00157 | 914 | Pfam | Elongation factor Tu GTP binding domain | 471 | 689 | IPR000795 | GO:0003924|GO:0005525 | |
Bma11g00157 | 914 | Pfam | Elongation factor Tu domain 2 | 713 | 778 | IPR004161 | GO:0005525 | |
Bma11g00157 | 914 | Gene3D | Translation factors | 694 | 781 | - | - | |
Bma11g00157 | 914 | Gene3D | Translation factors | 788 | 895 | - | - | |
Bma11g00157 | 914 | CDD | EF1_alpha | 474 | 692 | - | - | |
Bma11g00157 | 914 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 791 | 894 | IPR009001 | - | |
Bma11g00157 | 914 | SMART | Cupin_1_3 | 288 | 437 | IPR006045 | - | |
Bma11g00157 | 914 | SMART | Cupin_1_3 | 47 | 202 | IPR006045 | - | |
Bma11g00157 | 914 | TIGRFAM | EF-1_alpha: translation elongation factor EF-1, subunit alpha | 467 | 898 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g00055 | Bma-Chr6:885048 | Bma11g00157 | Bma-Chr11:1435075 | 2.34E-87 | dispersed | |
Bma11g00156 | Bma-Chr11:1429762 | Bma11g00157 | Bma-Chr11:1435075 | 0 | tandem | |
Bma11g00157 | Bma-Chr11:1435075 | Bma11g00158 | Bma-Chr11:1437897 | 0 | tandem | |
Bma03g00766 | Bma-Chr3:7009485 | Bma11g00157 | Bma-Chr11:1435075 | 3.02E-43 | transposed | |
Bma05g01293 | Bma-Chr5:52286158 | Bma11g00157 | Bma-Chr11:1435075 | 0 | transposed | |
Bma09g00063 | Bma-Chr9:1612204 | Bma11g00157 | Bma-Chr11:1435075 | 4.09E-13 | transposed | |
Bma01g02131 | Bma-Chr1:77796732 | Bma11g00157 | Bma-Chr11:1435075 | 5.74E-71 | transposed | |
Bma11g00157 | Bma-Chr11:1435075 | Bma03g00087 | Bma-Chr3:678748 | 0 | wgd | |
Bma11g00157 | Bma-Chr11:1435075 | Bma08g01145 | Bma-Chr8:50514532 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00157 | K03231 | - | mnt:21412438 | 880.167 |