Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00186 ATGGATCTCAAATGGGCATTTAAAGGTTTAGTTTTTGTCCAGGAGGAAACCACCGTTGCTGGTTTTGAAGTTCCAGGATCACCTGACTCAACTTATAACAATGCTTATCCTCCTCCGAGTGAAGATGATGCCCGGGATCCGCCTCTTGTGCCGCCACATCTGCAGCACACTTTACTCAGCTCTTCATCAAGGAGAGACTCAGTTGGAGCTCTTCCATTGCCGCAGAATGTCATTCTCAACCATCTCTACATCGAAAATAGGGAGCCCCCACGATCCGTAGTGGCAATGGGAGTCACTCATCGATTCCGGGTGCTGTGGTACGCTGTCACAAATTACAGAACTTGGATCTTCGTCCTTCTCTATGGCTACTCCATGGGAGTTGAGCTCTCCACTGATAATGTCATCGCCGAATATTTCTACGACAGATTCGATCTTAAGCTTCACACAGCCGGAATAATCGCAGCGACCTTCGGAATGGCGAACCTAGTAGCTCGACCATTCGGCGGCTTCGCTTCAGACTATGCGGCCAGATATTTCGGTATGAGAGGTAGGCTTTGGACCCTCTGGATTCTCCAAAGTCTGGGAGGAGCTTTCTGTATCTGGCTAGGACGAGCAAATTCACTTCCGATAGCCGTATTAGCAATGATTCTCTTCTCCGTCGGAGCTCAAGCTGCCTGCGGAGCAACGTTCGGAATCATCCCTTTCATTTCCCGGCGATCTCTCGGTATTATTTCAGGCTTAACCGGTGCTGGAGGTAACTTCGGGTCTGGTTTAACTCAGTTAGTGTTCTTCACGAGCTCAACATTCTCCACAGCAACTGGCCTTTCTCTTATGGGCGTGATGATCGTGTGCTGTACTTTACCGGTGACTCTGGTTCACTTTCCTCAGTGGGGAAGCATGTTTCTTCCAGCTTCCAAAGACGTGCAGAAATCTACAGAAGAATTCTATTATGGATCGGAATGGAACGAAGACGAAAAGCAGATGGGTTTGCACCAGCCAAGCCTCAAGTTTGCTGAAAACAGTAAATCGGAAAGAGGCCGTCGAGTTGCCTCAGCCCCGACTCCGCCAAATGTTACACCCTCTCACGTCTGA 1092 49.18 MDLKWAFKGLVFVQEETTVAGFEVPGSPDSTYNNAYPPPSEDDARDPPLVPPHLQHTLLSSSSRRDSVGALPLPQNVILNHLYIENREPPRSVVAMGVTHRFRVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVIAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGFASDYAARYFGMRGRLWTLWILQSLGGAFCIWLGRANSLPIAVLAMILFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFTSSTFSTATGLSLMGVMIVCCTLPVTLVHFPQWGSMFLPASKDVQKSTEEFYYGSEWNEDEKQMGLHQPSLKFAENSKSERGRRVASAPTPPNVTPSHV 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1680654 1684936 + Bma005652.2 Bma11g00186 90588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00186 363 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 103 360 - -
Bma11g00186 363 Gene3D MFS general substrate transporter like domains 111 298 IPR036259 -
Bma11g00186 363 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 45 103 IPR006828 GO:0005515
Bma11g00186 363 Gene3D - 19 110 - -
Bma11g00186 363 MobiDBLite consensus disorder prediction 23 49 - -
Bma11g00186 363 MobiDBLite consensus disorder prediction 327 363 - -
Bma11g00186 363 SMART AMPKBI_2 25 110 IPR006828 GO:0005515
Bma11g00186 363 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 103 360 IPR044772 GO:0015112
Bma11g00186 363 SUPERFAMILY MFS general substrate transporter 87 292 IPR036259 -
Bma11g00186 363 SUPERFAMILY AMPKBI-like 18 103 IPR037256 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01480 Bma11g00186 CCT
Bma07g01480 Bma11g00186 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00186 Bma-Chr11:1680654 Bma15g00175 Bma-Chr15:1857833 6.20E-94 dispersed
Bma11g00186 Bma-Chr11:1680654 Bma07g00156 Bma-Chr7:2186866 5.20E-42 wgd
Bma11g00186 Bma-Chr11:1680654 Bma07g01480 Bma-Chr7:50432010 1.21E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00186 K02575 - zju:107411468 476.863