Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00195 ATGGGCGGGGCTGGATTGAACAGCGCCGCCGACCGACCTGGCGGATGTCTGCGGTTTTCTATCTACATGGTTCACGGGAGGTGGTTCTCCGTATTCGCCACCTTCCTCATCATGGCCGGAGCCGGAGCTACTTATCTATTCGGAACATATTCCAAGCAGATAAAAGCTACTCTCGGCTACGACCAAACTACTCTCAACCTCATCGGCTTTTTCAAGGACCTTGGAGCTAACGTCGGAGTATTTTCCGGTCTGATTGCAGAGGTAACTCCTACGTGGTTCGTCCTCTTAGTGGGGTCGGCTATGAATTTCGCTGGGTATTTCATGATTTGGCTGGCAGTCACCGGAAAAATCAACAAGCCTAAAGTTTGGCAAATGTGTATCTACATTTGCGTCGGAGCAAACTCGCAGAATTTCGCCAACACCGGAGCTCTTGTCACTTGCGTGAAGAATTTCCCTGAAGATCGAGGCGTTATGTTGGGTCTTCTGAAGGGATTTACAGGCCTTAGCGGGGCTATAATGATGCAGCTTTACTTGGCCATCTATGGAAATGACTCCAAATCTCTCATCCTTCTCATCGCTTGGCTCCCGGCCGCACTCTCCGTCGTCTTCGTTTACACCATTCGAGCTATCAATGTCCAGAGAGAGAGGAACGAGCTTAGGGTTTTCTACCATTTCCTTTATATATCAATGGCTCTCGCTGTTTTTCTCCTGATCGTCACTTTGCTTGAGAAGACGATTCATTTTCCCCACCAAGCTTACGCTGGGGTTGTTACAGTAGTCTGTTGTTTTCTCTTTTCCCCCCTCTTAATCGCCATTAGAGAGGAGCTCCGCCTCTTCGACATCAAGAACCAGCCTGTGAATCCCCCTTCGCAGATTATCGTCGAAAAACCAGAACCAGATGAGAGAAGCACACCCTGTTTCTCAAATATATGTAATAAACCAGAAAGAGGAGAAGACTACACTATTTTACAGGCTCTCCTCAGCGCCGATATGTTTATTTTGTTCCTCGCCACTTTCTGTGGACTCGGTTCGAGTTTAACGGCAGTGGATAACCTGGGTCAAATCGGCGAGTCACTCGGATACCCATCTCAGACCGTCGGCACTTTCGTCTCTCTCGTGAGCATTTGGAACTATTTCGGAAGAGTCTTCTCTGGTTTCTGTTCAGAAACATTACTAACAAAATATAAAATCCCTAGACCTCTCGTGTTGACCTTCGTCCTTCTCCTCTCCACCGTCGGCCACCTCCTCATCGCCTTTCCAGCCCCTGGCTCCGTCTACATAGCCTCCATTATCATCGGATTCTCATTCGGCGCTCAGTTGCCGTTGCTTTTCGCCATAATTTCCGAACTCTTCGGCCTCAAATACTACTCCACACTGTTCAATTGCGGCCAATTAGCTTCGCCGTTGGGATCGTATATACTGAACGTGAAAGTCACCGGTAAGTTGTACGACAGAGAAGCGTTGAAGGATCTAGCGGCAAAGGGTCTAAGCAGATCGTCGGTAAAGGAGCTGATCTGTATCGGGGCCAAGTGTTACAGATTACCTTTTATAATTCTTGCCGCCGTGACATTCAGCGGCGCCGTTATTTCTCTGATCTTGGTGGTTAGAACTCGGGAATTCTACAGTGGGGACATTTACAAGAAGTTCAGAGACAAAAGCAATTACCTTGAGACGGAGTTGGATTTACCGTCGGCGACTGAAAAGAAGGAAGTCCGGTAA 1719 48.23 MGGAGLNSAADRPGGCLRFSIYMVHGRWFSVFATFLIMAGAGATYLFGTYSKQIKATLGYDQTTLNLIGFFKDLGANVGVFSGLIAEVTPTWFVLLVGSAMNFAGYFMIWLAVTGKINKPKVWQMCIYICVGANSQNFANTGALVTCVKNFPEDRGVMLGLLKGFTGLSGAIMMQLYLAIYGNDSKSLILLIAWLPAALSVVFVYTIRAINVQRERNELRVFYHFLYISMALAVFLLIVTLLEKTIHFPHQAYAGVVTVVCCFLFSPLLIAIREELRLFDIKNQPVNPPSQIIVEKPEPDERSTPCFSNICNKPERGEDYTILQALLSADMFILFLATFCGLGSSLTAVDNLGQIGESLGYPSQTVGTFVSLVSIWNYFGRVFSGFCSETLLTKYKIPRPLVLTFVLLLSTVGHLLIAFPAPGSVYIASIIIGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVKVTGKLYDREALKDLAAKGLSRSSVKELICIGAKCYRLPFIILAAVTFSGAVISLILVVRTREFYSGDIYKKFRDKSNYLETELDLPSATEKKEVR 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1750042 1751760 + Bma005662.1 Bma11g00195 90597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00195 572 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 16 557 - -
Bma11g00195 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 557 - -
Bma11g00195 572 CDD MFS_Mch1p_like 26 527 - -
Bma11g00195 572 Gene3D MFS general substrate transporter like domains 326 541 IPR036259 -
Bma11g00195 572 Pfam Nodulin-like 27 272 IPR010658 -
Bma11g00195 572 SUPERFAMILY MFS general substrate transporter 27 538 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00195 Bma-Chr11:1750042 Bma12g01012 Bma-Chr12:42196598 1.10E-106 dispersed
Bma01g00323 Bma-Chr1:2668100 Bma11g00195 Bma-Chr11:1750042 5.48E-84 transposed
Bma13g00691 Bma-Chr13:19159163 Bma11g00195 Bma-Chr11:1750042 9.06E-79 transposed
Bma11g00195 Bma-Chr11:1750042 Bma03g00359 Bma-Chr3:2654455 0 wgd
Bma11g00195 Bma-Chr11:1750042 Bma03g00062 Bma-Chr3:512202 0 wgd
Bma11g00195 Bma-Chr11:1750042 Bma08g00921 Bma-Chr8:48186928 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00195 - - fve:101295952 854.744