Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00217 ATGGAATCAACTTTGCCATCCAGTACAATAACAGCGAATGTGGACAATGATAAAGTTCCAATGGCGAATGAAACTGAGAAGCAGATAAATGAGTGTAGTACCACATATGAGAGGAAAGAAAATGAGAAAGCTTCGAATGTGAGCGTGGTAGTCAAATCAGGTACTGCATACACAAATTCTACTAGACATGGTCTCTCTTCCAATTGCTGTAACAAAACAGGATCTCCATTGACAAAATCTGCTGAGAGATCAAGATCAAAAGGTGAGTTTTCTCAAAGCTCGGAAAGTGGCATTGTTGATTATAGCAGTAGTCCAAGCATTAGTAGAGAAAGTATTGTCCTTGGCTCTAGTCGTAGTGGGAATAGGCCTCACATGTCCAAAGACTTGAGATGGGAAGCCATTCACCAGGTTCAGAACCAGAACAAAATCCTATGCTTGACAAACTTCAAGATGCTCAGGAGACTTGGACTTGGGGACATTGGGACTGTGTATCTTGCCGAGCTAAGTGATACAAATTGTCTTTTTGCAATGAAAGTGATGGACAATGAATATTTGACCAGCAGGAAAAAAATGCTACGGGCCCAGACTGAGAAAGAGATACTGCATATGCTGGACCATCCCTTTCTGCCCACGCTGTATGCTCACTTTGAAACAGATAAATTCACATACTTAGTGATTGACTACTGTCCAGGTGGAGATCTCCATGTGCTGCGACAAAAGCAACCAAGCAGGAATTTCTCCGAGCAAGCAGTCAGATTTTACGTGGCCGAAGTTCTTCTTGCTCTGGAGTACTTACACATGCAAGGTGTCATTTATCGAGACTTAAAACCAGAAAATATACTGATCCGGGAAGATGGTCACATCATGCTCACAGGCTTCGACTCATCGTTCAGATGTGCTGTCAATACAATGGTGCTTAAATCATCCTCTCCTTTTGTAGAGCCTACCAAGAAGGCCATGAGTCCGTGCGATGATAATAGCTGCATTCCCCCTCTGTGCCTTCAACCATCTTGGCAAGTCCCTTGCTTCAGTCCTAAGCTCCTGTCTGCCGCATCAAAATCACGAAAGATCAGATCTGACCCAGTTGCCCAGGTGAACCCATTACCACAGCTTGTAGTGGAGCCAATCAGTGCCCGTTCAAACTCTCTTGTAGGAACCCATGAATATCTTGCTCCAGAGATAATCAAAGGCCAGGGCCATGGAAATGCCGTTGACTGGTGGACATATGGGATATTTCTCTTTGAGTTACTCTATGGCAAGACACCCTTCAAGGGCTCATCAAATGAGGAAACATTAACCAACATAGTATCACAAAGTCTTAGGTTTCCAGATACTCCCATGGTTAGTTTTCATGCAAGAGATTTGATTAGATGTTTACTGATAAAGGAGCCAGAAAATCGGCTAGGCTCGGTGAAAGGAGCAGCAGAAATCAAGCAGCACTCGTTTTTCGATGGCCTGAATTGGGCTTTGATCCGATGCACAATTCCGCCAGAACTGCCTAAGGTTTCTGATGAGGTGATGGAGCCGCCTTCCATTGACTCCTCCAAAAAGGAGGGCTCAACTCCTGAGGTAAATGAGAATACAGTAGAACTAGAGGATGCTTTTGGGCTATTTTAG 1617 44.09 MESTLPSSTITANVDNDKVPMANETEKQINECSTTYERKENEKASNVSVVVKSGTAYTNSTRHGLSSNCCNKTGSPLTKSAERSRSKGEFSQSSESGIVDYSSSPSISRESIVLGSSRSGNRPHMSKDLRWEAIHQVQNQNKILCLTNFKMLRRLGLGDIGTVYLAELSDTNCLFAMKVMDNEYLTSRKKMLRAQTEKEILHMLDHPFLPTLYAHFETDKFTYLVIDYCPGGDLHVLRQKQPSRNFSEQAVRFYVAEVLLALEYLHMQGVIYRDLKPENILIREDGHIMLTGFDSSFRCAVNTMVLKSSSPFVEPTKKAMSPCDDNSCIPPLCLQPSWQVPCFSPKLLSAASKSRKIRSDPVAQVNPLPQLVVEPISARSNSLVGTHEYLAPEIIKGQGHGNAVDWWTYGIFLFELLYGKTPFKGSSNEETLTNIVSQSLRFPDTPMVSFHARDLIRCLLIKEPENRLGSVKGAAEIKQHSFFDGLNWALIRCTIPPELPKVSDEVMEPPSIDSSKKEGSTPEVNENTVELEDAFGLF 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1923390 1925528 - Bma005686.1 Bma11g00217 90619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00217 538 Gene3D Transferase(Phosphotransferase) domain 1 229 297 - -
Bma11g00217 538 Pfam Protein kinase domain 150 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00217 538 Pfam Protein kinase domain 380 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00217 538 SMART serkin_6 149 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00217 538 MobiDBLite consensus disorder prediction 60 103 - -
Bma11g00217 538 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 36 531 - -
Bma11g00217 538 SUPERFAMILY Protein kinase-like (PK-like) 123 506 IPR011009 -
Bma11g00217 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Bma11g00217 538 MobiDBLite consensus disorder prediction 60 81 - -
Bma11g00217 538 PANTHER FLIPPASE KINASE 1-RELATED 36 531 - -
Bma11g00217 538 MobiDBLite consensus disorder prediction 502 528 - -
Bma11g00217 538 Gene3D Transferase(Phosphotransferase) domain 1 378 501 - -
Bma11g00217 538 MobiDBLite consensus disorder prediction 1 18 - -
Bma11g00217 538 Coils Coil 22 42 - -
Bma11g00217 538 CDD STKc_phototropin_like 149 504 - -
Bma11g00217 538 ProSiteProfiles Protein kinase domain profile. 149 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00217 538 MobiDBLite consensus disorder prediction 1 24 - -
Bma11g00217 538 Gene3D Phosphorylase Kinase; domain 1 147 228 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00187 Bma11g00217 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00217 Bma-Chr11:1923390 Bma14g00904 Bma-Chr14:10219310 0 dispersed
Bma13g00697 Bma-Chr13:19428421 Bma11g00217 Bma-Chr11:1923390 8.34E-121 transposed
Bma11g00217 Bma-Chr11:1923390 Bma14g00418 Bma-Chr14:4938822 4.47E-135 wgd
Bma11g00217 Bma-Chr11:1923390 Bma04g00574 Bma-Chr4:5221904 4.69E-169 wgd
Bma11g00217 Bma-Chr11:1923390 Bma07g00187 Bma-Chr7:2396949 0 wgd
Bma11g00217 Bma-Chr11:1923390 Bma07g01451 Bma-Chr7:50237397 1.56E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66768 PF00069 Pkinase 4.20E-36 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00217 - - qsu:111996719 736.873