Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00217 | ATGGAATCAACTTTGCCATCCAGTACAATAACAGCGAATGTGGACAATGATAAAGTTCCAATGGCGAATGAAACTGAGAAGCAGATAAATGAGTGTAGTACCACATATGAGAGGAAAGAAAATGAGAAAGCTTCGAATGTGAGCGTGGTAGTCAAATCAGGTACTGCATACACAAATTCTACTAGACATGGTCTCTCTTCCAATTGCTGTAACAAAACAGGATCTCCATTGACAAAATCTGCTGAGAGATCAAGATCAAAAGGTGAGTTTTCTCAAAGCTCGGAAAGTGGCATTGTTGATTATAGCAGTAGTCCAAGCATTAGTAGAGAAAGTATTGTCCTTGGCTCTAGTCGTAGTGGGAATAGGCCTCACATGTCCAAAGACTTGAGATGGGAAGCCATTCACCAGGTTCAGAACCAGAACAAAATCCTATGCTTGACAAACTTCAAGATGCTCAGGAGACTTGGACTTGGGGACATTGGGACTGTGTATCTTGCCGAGCTAAGTGATACAAATTGTCTTTTTGCAATGAAAGTGATGGACAATGAATATTTGACCAGCAGGAAAAAAATGCTACGGGCCCAGACTGAGAAAGAGATACTGCATATGCTGGACCATCCCTTTCTGCCCACGCTGTATGCTCACTTTGAAACAGATAAATTCACATACTTAGTGATTGACTACTGTCCAGGTGGAGATCTCCATGTGCTGCGACAAAAGCAACCAAGCAGGAATTTCTCCGAGCAAGCAGTCAGATTTTACGTGGCCGAAGTTCTTCTTGCTCTGGAGTACTTACACATGCAAGGTGTCATTTATCGAGACTTAAAACCAGAAAATATACTGATCCGGGAAGATGGTCACATCATGCTCACAGGCTTCGACTCATCGTTCAGATGTGCTGTCAATACAATGGTGCTTAAATCATCCTCTCCTTTTGTAGAGCCTACCAAGAAGGCCATGAGTCCGTGCGATGATAATAGCTGCATTCCCCCTCTGTGCCTTCAACCATCTTGGCAAGTCCCTTGCTTCAGTCCTAAGCTCCTGTCTGCCGCATCAAAATCACGAAAGATCAGATCTGACCCAGTTGCCCAGGTGAACCCATTACCACAGCTTGTAGTGGAGCCAATCAGTGCCCGTTCAAACTCTCTTGTAGGAACCCATGAATATCTTGCTCCAGAGATAATCAAAGGCCAGGGCCATGGAAATGCCGTTGACTGGTGGACATATGGGATATTTCTCTTTGAGTTACTCTATGGCAAGACACCCTTCAAGGGCTCATCAAATGAGGAAACATTAACCAACATAGTATCACAAAGTCTTAGGTTTCCAGATACTCCCATGGTTAGTTTTCATGCAAGAGATTTGATTAGATGTTTACTGATAAAGGAGCCAGAAAATCGGCTAGGCTCGGTGAAAGGAGCAGCAGAAATCAAGCAGCACTCGTTTTTCGATGGCCTGAATTGGGCTTTGATCCGATGCACAATTCCGCCAGAACTGCCTAAGGTTTCTGATGAGGTGATGGAGCCGCCTTCCATTGACTCCTCCAAAAAGGAGGGCTCAACTCCTGAGGTAAATGAGAATACAGTAGAACTAGAGGATGCTTTTGGGCTATTTTAG | 1617 | 44.09 | MESTLPSSTITANVDNDKVPMANETEKQINECSTTYERKENEKASNVSVVVKSGTAYTNSTRHGLSSNCCNKTGSPLTKSAERSRSKGEFSQSSESGIVDYSSSPSISRESIVLGSSRSGNRPHMSKDLRWEAIHQVQNQNKILCLTNFKMLRRLGLGDIGTVYLAELSDTNCLFAMKVMDNEYLTSRKKMLRAQTEKEILHMLDHPFLPTLYAHFETDKFTYLVIDYCPGGDLHVLRQKQPSRNFSEQAVRFYVAEVLLALEYLHMQGVIYRDLKPENILIREDGHIMLTGFDSSFRCAVNTMVLKSSSPFVEPTKKAMSPCDDNSCIPPLCLQPSWQVPCFSPKLLSAASKSRKIRSDPVAQVNPLPQLVVEPISARSNSLVGTHEYLAPEIIKGQGHGNAVDWWTYGIFLFELLYGKTPFKGSSNEETLTNIVSQSLRFPDTPMVSFHARDLIRCLLIKEPENRLGSVKGAAEIKQHSFFDGLNWALIRCTIPPELPKVSDEVMEPPSIDSSKKEGSTPEVNENTVELEDAFGLF | 538 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1923390 | 1925528 | - | Bma005686.1 | Bma11g00217 | 90619 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00217 | 538 | Gene3D | Transferase(Phosphotransferase) domain 1 | 229 | 297 | - | - | |
Bma11g00217 | 538 | Pfam | Protein kinase domain | 150 | 298 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00217 | 538 | Pfam | Protein kinase domain | 380 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00217 | 538 | SMART | serkin_6 | 149 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00217 | 538 | MobiDBLite | consensus disorder prediction | 60 | 103 | - | - | |
Bma11g00217 | 538 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 36 | 531 | - | - | |
Bma11g00217 | 538 | SUPERFAMILY | Protein kinase-like (PK-like) | 123 | 506 | IPR011009 | - | |
Bma11g00217 | 538 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 270 | 282 | IPR008271 | GO:0004672|GO:0006468 | |
Bma11g00217 | 538 | MobiDBLite | consensus disorder prediction | 60 | 81 | - | - | |
Bma11g00217 | 538 | PANTHER | FLIPPASE KINASE 1-RELATED | 36 | 531 | - | - | |
Bma11g00217 | 538 | MobiDBLite | consensus disorder prediction | 502 | 528 | - | - | |
Bma11g00217 | 538 | Gene3D | Transferase(Phosphotransferase) domain 1 | 378 | 501 | - | - | |
Bma11g00217 | 538 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Bma11g00217 | 538 | Coils | Coil | 22 | 42 | - | - | |
Bma11g00217 | 538 | CDD | STKc_phototropin_like | 149 | 504 | - | - | |
Bma11g00217 | 538 | ProSiteProfiles | Protein kinase domain profile. | 149 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00217 | 538 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bma11g00217 | 538 | Gene3D | Phosphorylase Kinase; domain 1 | 147 | 228 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00187 | Bma11g00217 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma11g00217 | Bma-Chr11:1923390 | Bma14g00904 | Bma-Chr14:10219310 | 0 | dispersed | |
Bma13g00697 | Bma-Chr13:19428421 | Bma11g00217 | Bma-Chr11:1923390 | 8.34E-121 | transposed | |
Bma11g00217 | Bma-Chr11:1923390 | Bma14g00418 | Bma-Chr14:4938822 | 4.47E-135 | wgd | |
Bma11g00217 | Bma-Chr11:1923390 | Bma04g00574 | Bma-Chr4:5221904 | 4.69E-169 | wgd | |
Bma11g00217 | Bma-Chr11:1923390 | Bma07g00187 | Bma-Chr7:2396949 | 0 | wgd | |
Bma11g00217 | Bma-Chr11:1923390 | Bma07g01451 | Bma-Chr7:50237397 | 1.56E-138 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66768 | PF00069 | Pkinase | 4.20E-36 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00217 | - | - | qsu:111996719 | 736.873 |