Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00226 | ATGTTCCCTTCTTGGCCAATCAGATTCCACGAAACGCAAAGAGGAAGCTCTAATTCAGGAGAGGAAAGCACCGAATCGGGATCGGCGGTGAATTTTCTACACGGTAAAGCCGAGGAGGCGCAGTTAGAACAATCAGAATCGCCGATGAGTAGTAAAAAGCCTCCGACTTCGGATCATTATCGTCTTCAACCTGATGATCAATTAGTCGCCAAACCAACACACGAAAAGAGAAAAGGAGCTGTTTCAACATCAGAGAAACAACTTGATGCTAAGACATTGAGACGTTTAGCTCAAAATAGAGAAGCTGCAAGAAAGAGCCGCCTCAGAAAAAAGGCTTATGTACAGCAGCTAGAATCAAGTAGACTGAAACTCACCCAGATTGAACAAGACCTTCAACGATCACGCTCTCAGGGTTTGTTTTTGGGTGCTTGTGGTGCCGTCGGAGGGAATATCAGTTCCGGAGCTGCAGTCTTTGACATGGAGTATGCAAGATGGCTAGACGATGATCATCGACACATGGCGGAGCTACGGGGCGGCTTACATGCGCATTTACCGGATGGGGATCTCCGAATAGTAGTTGACGGCTACATTTCTCACTACGATGAACTTTTCCGGCTAAAAGAAGTGGCTGCTAAATCTGATGTCTTTCATCTCATCACTGGATTGTGGATGTCTCCGGCCGAACGGTGCTTCCTTTGGATGGGTGGTTTCCGGCCATCGGAGCTCATTAAGATGCTAATATCACAACTAGACCCAATAACTGAACAGCAAGTTATGGGAATATGCAAACTCCAGCATTCTTCACAGCAGGCAGAAGAGGCACTTAGTCAAGGCTTGGAACAACTCCACCAATCTCTGATCGACACCATTGCCGGCGGACCGATCATCGACGGGATGAACGGAATGATTGTGGCGATTGGAAAGCTTGCCAGTCTCGAGGGCTTCGTTTGCCAGGCGGATATACTGAGGCAGCAAACTCTTCACCAACTACAACGGATACTAACAATCCGGCAAGCAGCTCGATGCTTCCTCGTGATCGGCGAGTATTACGGCAGATTACGAGCCCTCAGTTCTCTATGGTCGTCTCGACCCAGAGAGACGATGATCAACGACGATAATTCCTGCCAGACATCAACAGAGCTACACATGATTCAACAGCCTCCACCAAATCATTTCTCGAACTTTTGA | 1188 | 47.9 | MFPSWPIRFHETQRGSSNSGEESTESGSAVNFLHGKAEEAQLEQSESPMSSKKPPTSDHYRLQPDDQLVAKPTHEKRKGAVSTSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQDLQRSRSQGLFLGACGAVGGNISSGAAVFDMEYARWLDDDHRHMAELRGGLHAHLPDGDLRIVVDGYISHYDELFRLKEVAAKSDVFHLITGLWMSPAERCFLWMGGFRPSELIKMLISQLDPITEQQVMGICKLQHSSQQAEEALSQGLEQLHQSLIDTIAGGPIIDGMNGMIVAIGKLASLEGFVCQADILRQQTLHQLQRILTIRQAARCFLVIGEYYGRLRALSSLWSSRPRETMINDDNSCQTSTELHMIQQPPPNHFSNF | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2012367 | 2016290 | - | Bma005692.1 | Bma11g00226 | 90628 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00226 | 395 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 373 | - | - | |
Bma11g00226 | 395 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 373 | - | - | |
Bma11g00226 | 395 | SUPERFAMILY | Leucine zipper domain | 91 | 134 | IPR046347 | GO:0003700|GO:0006355 | |
Bma11g00226 | 395 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 89 | 133 | IPR004827 | GO:0003700|GO:0006355 | |
Bma11g00226 | 395 | Pfam | bZIP transcription factor | 90 | 131 | IPR004827 | GO:0003700|GO:0006355 | |
Bma11g00226 | 395 | Gene3D | - | 90 | 139 | - | - | |
Bma11g00226 | 395 | MobiDBLite | consensus disorder prediction | 58 | 93 | - | - | |
Bma11g00226 | 395 | MobiDBLite | consensus disorder prediction | 10 | 30 | - | - | |
Bma11g00226 | 395 | CDD | bZIP_HBP1b-like | 91 | 142 | - | - | |
Bma11g00226 | 395 | SMART | brlzneu | 87 | 153 | IPR004827 | GO:0003700|GO:0006355 | |
Bma11g00226 | 395 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 94 | 109 | IPR004827 | GO:0003700|GO:0006355 | |
Bma11g00226 | 395 | Pfam | Seed dormancy control | 172 | 247 | IPR025422 | GO:0006351|GO:0043565 | |
Bma11g00226 | 395 | MobiDBLite | consensus disorder prediction | 43 | 57 | - | - | |
Bma11g00226 | 395 | ProSiteProfiles | DOG1 domain profile. | 155 | 363 | IPR025422 | GO:0006351|GO:0043565 | |
Bma11g00226 | 395 | Coils | Coil | 117 | 137 | - | - | |
Bma11g00226 | 395 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma11g00226 | Bma14g00412 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma11g00226 | Bma-Chr11:2012367 | Bma15g00081 | Bma-Chr15:916771 | 1.66E-110 | dispersed | |
Bma14g00992 | Bma-Chr14:11555938 | Bma11g00226 | Bma-Chr11:2012367 | 5.10E-07 | dispersed | |
Bma11g00226 | Bma-Chr11:2012367 | Bma14g00412 | Bma-Chr14:4841704 | 2.60E-176 | wgd | |
Bma11g00226 | Bma-Chr11:2012367 | Bma07g01446 | Bma-Chr7:50182347 | 2.68E-76 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58017 | PF14144 | DOG1 | 4.10E-30 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00226 | K14431 | - | pop:7460056 | 580.867 |