Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00226 ATGTTCCCTTCTTGGCCAATCAGATTCCACGAAACGCAAAGAGGAAGCTCTAATTCAGGAGAGGAAAGCACCGAATCGGGATCGGCGGTGAATTTTCTACACGGTAAAGCCGAGGAGGCGCAGTTAGAACAATCAGAATCGCCGATGAGTAGTAAAAAGCCTCCGACTTCGGATCATTATCGTCTTCAACCTGATGATCAATTAGTCGCCAAACCAACACACGAAAAGAGAAAAGGAGCTGTTTCAACATCAGAGAAACAACTTGATGCTAAGACATTGAGACGTTTAGCTCAAAATAGAGAAGCTGCAAGAAAGAGCCGCCTCAGAAAAAAGGCTTATGTACAGCAGCTAGAATCAAGTAGACTGAAACTCACCCAGATTGAACAAGACCTTCAACGATCACGCTCTCAGGGTTTGTTTTTGGGTGCTTGTGGTGCCGTCGGAGGGAATATCAGTTCCGGAGCTGCAGTCTTTGACATGGAGTATGCAAGATGGCTAGACGATGATCATCGACACATGGCGGAGCTACGGGGCGGCTTACATGCGCATTTACCGGATGGGGATCTCCGAATAGTAGTTGACGGCTACATTTCTCACTACGATGAACTTTTCCGGCTAAAAGAAGTGGCTGCTAAATCTGATGTCTTTCATCTCATCACTGGATTGTGGATGTCTCCGGCCGAACGGTGCTTCCTTTGGATGGGTGGTTTCCGGCCATCGGAGCTCATTAAGATGCTAATATCACAACTAGACCCAATAACTGAACAGCAAGTTATGGGAATATGCAAACTCCAGCATTCTTCACAGCAGGCAGAAGAGGCACTTAGTCAAGGCTTGGAACAACTCCACCAATCTCTGATCGACACCATTGCCGGCGGACCGATCATCGACGGGATGAACGGAATGATTGTGGCGATTGGAAAGCTTGCCAGTCTCGAGGGCTTCGTTTGCCAGGCGGATATACTGAGGCAGCAAACTCTTCACCAACTACAACGGATACTAACAATCCGGCAAGCAGCTCGATGCTTCCTCGTGATCGGCGAGTATTACGGCAGATTACGAGCCCTCAGTTCTCTATGGTCGTCTCGACCCAGAGAGACGATGATCAACGACGATAATTCCTGCCAGACATCAACAGAGCTACACATGATTCAACAGCCTCCACCAAATCATTTCTCGAACTTTTGA 1188 47.9 MFPSWPIRFHETQRGSSNSGEESTESGSAVNFLHGKAEEAQLEQSESPMSSKKPPTSDHYRLQPDDQLVAKPTHEKRKGAVSTSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQDLQRSRSQGLFLGACGAVGGNISSGAAVFDMEYARWLDDDHRHMAELRGGLHAHLPDGDLRIVVDGYISHYDELFRLKEVAAKSDVFHLITGLWMSPAERCFLWMGGFRPSELIKMLISQLDPITEQQVMGICKLQHSSQQAEEALSQGLEQLHQSLIDTIAGGPIIDGMNGMIVAIGKLASLEGFVCQADILRQQTLHQLQRILTIRQAARCFLVIGEYYGRLRALSSLWSSRPRETMINDDNSCQTSTELHMIQQPPPNHFSNF 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2012367 2016290 - Bma005692.1 Bma11g00226 90628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00226 395 PANTHER TRANSCRIPTION FACTOR TGA9 1 373 - -
Bma11g00226 395 PANTHER TRANSCRIPTION FACTOR TGA9 1 373 - -
Bma11g00226 395 SUPERFAMILY Leucine zipper domain 91 134 IPR046347 GO:0003700|GO:0006355
Bma11g00226 395 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 133 IPR004827 GO:0003700|GO:0006355
Bma11g00226 395 Pfam bZIP transcription factor 90 131 IPR004827 GO:0003700|GO:0006355
Bma11g00226 395 Gene3D - 90 139 - -
Bma11g00226 395 MobiDBLite consensus disorder prediction 58 93 - -
Bma11g00226 395 MobiDBLite consensus disorder prediction 10 30 - -
Bma11g00226 395 CDD bZIP_HBP1b-like 91 142 - -
Bma11g00226 395 SMART brlzneu 87 153 IPR004827 GO:0003700|GO:0006355
Bma11g00226 395 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Bma11g00226 395 Pfam Seed dormancy control 172 247 IPR025422 GO:0006351|GO:0043565
Bma11g00226 395 MobiDBLite consensus disorder prediction 43 57 - -
Bma11g00226 395 ProSiteProfiles DOG1 domain profile. 155 363 IPR025422 GO:0006351|GO:0043565
Bma11g00226 395 Coils Coil 117 137 - -
Bma11g00226 395 MobiDBLite consensus disorder prediction 1 93 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00226 Bma14g00412 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00226 Bma-Chr11:2012367 Bma15g00081 Bma-Chr15:916771 1.66E-110 dispersed
Bma14g00992 Bma-Chr14:11555938 Bma11g00226 Bma-Chr11:2012367 5.10E-07 dispersed
Bma11g00226 Bma-Chr11:2012367 Bma14g00412 Bma-Chr14:4841704 2.60E-176 wgd
Bma11g00226 Bma-Chr11:2012367 Bma07g01446 Bma-Chr7:50182347 2.68E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58017 PF14144 DOG1 4.10E-30 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00226 K14431 - pop:7460056 580.867