Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00286 ATGAAATCTAGTCTTGTGTTTTCTTTTTCTGAATTTCGTTTCCAAGCAATCCAAGCTCCCGTAACAAATTCATTTGTTGTCGCATCTCCTGTTGAAAGTCAAAGTGGGGAAAAGCCGATTATTTTGTCTATTTCAGGGTTCACGATGTTTAGATTCTGGGAAAGGAAGATCCTTGAAGCCAATGAGGATGATCTTAAGGTGCCTTTAAATGGATCAATTCTCAATAACGAACAAGATATAGCAGTATGTCGACTAAGAATTAAAGGAATGACATGTACTACCTGTGCTGAATCTGTTGAAAGTGCCCTTCTAATGTTTGAGGGAGTGAAAAAAGCAGCAGTTGGTTTAGCTTTGCAAGAAGCAAGGGTGCATTTTGATTCTAACCTCATCAATGCTGAGCAAGTTGCTCAGGCAGTTGAAGATGCTGGCTTTGGAGCTGAGATAATAAATTCTGGAAATGATGTTAACATAGCTCATCTAAAACTTCAAGGAATTAGTTCTCCAACAGATATGACCACTATAAAATCTTTGCTTGAACTAGCTGTTGGTGTAGATCGTGTTGACATGGACTTAAAAGGACAAACGGTTGCCATCAGCTATGACCCAGACCTCACCGGTCCAAGGTCACTCATACAGTGCATAAGGGAATCAGGCCAACCACACACTTTTGATGCAAACTTGTATGCTCCTCCAAGACGAAGAGATACAGAGCAACTTCATGAAATTCAGACTTACAGAAACCAATTCCTGCTCAGCTGCCTGTTTTCTGCTCCTGTAATTTTATTTTCCATGGTACTTCCCATGCTCCCCCATTATGGAAATTGGTTAGGGTACAAGATTCACAATATGTTTACTGTTGGGATGCTTCTTAGATGGATTCTTTGCACACCTGTTCAGTTTATTGTTGGCCGAAGATTTTATGTGGGATCATACTATGCATTGAGGCGAAAATCTGCCAATATGGAAGTTCTAGTGGCATTAGGCACAAATGCTGCTTACTTTTATTCTGTATACATAGTAATGAAATCAATGGCCTCAGATGGGTTTGAAGGACAAGATTTCTTTGAAACTAGTTCCATGCTAATATCCTTTATTCTCTTGGGGAAATACTTGGAGGTAGTGGCTAGAGGAAAAACCTCCAATGCTTTAGCTCAGCTTGCGGATCTTGCTCCTGATGTAGCTCATCTGTTAAAGTTAGACGATGGTGGGAACGTTATCTTAGAGATGGAAATCGACACTCAATTGATACAGAGGAATGACATTATAAAGATTGTTCCAGGAGAAAAAGTTTCAGTTGACGGGATTGTTATGAATGGTCATAGTCATGTTAATGAGAGTATGATCACAGGAGAGGCTAGGCCAACTTTTAAAAAAGTTGGTGACAAGGTTATTGGCGGCACTGTCAATGAAAATGGATGCTTATTGGTTAAAGCCACCCATGTGGGGTCTGATACTGCACTATCTCAAATTGTTCAACTTGTGGAGGCTGCGCAACTTGCTAGAGCACCTGTTCAGAAATTAGCTGACCAGATATCAAAATTTTTTGTTCCTGCTGTTGTTCTCGCAGCATTTCTAACATGGCTTGCGTGGTTCGTTTCTGGAGAAATGCGTATATATCCTAGGCACTGGATACCAAAGGCCATGGATGGATTTGAGCTTGCATTGCAGTTTGGTATTTCTGTACTAGTGGTTGCCTGCCCATGCGCTCTTGGTCTAGCAACACCAACAGCAGTCATGGTTGCCTCAGGGAAAGGTGCTTCTCAAGGGGTGCTTATCAAAGGTGGAAACGCCTTGGAAAAAGCACACAAGGTGAAAACCATTGTCTTTGATAAGACTGGAACACTAACAGTTGGCCGGCCAGTGGTAGTTAGCGCTGTGCTCTTCTCCAATTTTTCAATGGAGGAATTCTGTGATATGACTGTAGCTACAGAGGCAAATAGCGAACATCCATTAGCAAAAGCTGTGGTAGATCATGCAAAGAAGCTGAGGCAGAAATTTGGGTGCCAAAATGAATGCCTGACAGAGGTGAAGGACTTTGAGGTGCACCCAGGAGCAGGTGTTGGTGGAAAAGTTGGAGACAGATCAGTTTTTGTTGGAAACAAAAGACTCATGCATGCTTGTAATATTCCAATCGGTCTCGAAGTAGAGCAATATATTTTAGAACATGAGCAGCTTGCTCGAACATGTGTACTAGTTGCCATTGATGGAAAGATTGCTGGTGCTTTTGCTGTTACTGATCCTGTAAAGCCTGAGGCTGGGATTGTTATATCCTTTCTTCGTTCGAAGGGCATCTCAAGCATCATGGTTACTGGTGACAACTGGTCTACAGCAACTGCGATTGCAAAGGAGGTGGGTATTGACAAAGTCTTTGCCGAGACAGATCCAATTGGAAAAGCTGATAAGATTAAAGATTTGCAGATGCAAGGGATCATAGTGGCAATGGTAGGGGATGGAATCAATGACTCACCTGCCTTAGTTGCAGCCGATGTTGGTATGGCAATTGGGGCCGGAACAGATATTGCTATAGAAGCAGCTGACATAATTCTCATAAAAAGCAATTTGGAAGATGTTGTTACAGCTGTAGATCTTTCAAAAAAGACCATGTCTCGTATTCGGCTTAACTACATTTGGGCCCTCGGCTATAATATTCTTGGTGTGCCAGTTGCTGCTGGAATCTTATACCCCTTCACTGGGATAAGGTTGCCACCATGGTTAGCTGGTGCTTGCATGGCTGCTTCATCCCTAAGTGTAGTTTGTTCTTCTCTATTGTTGCAATCATACAAGAAGCCTCTGCATATTAAATCTACCTGA 2811 42.08 MKSSLVFSFSEFRFQAIQAPVTNSFVVASPVESQSGEKPIILSISGFTMFRFWERKILEANEDDLKVPLNGSILNNEQDIAVCRLRIKGMTCTTCAESVESALLMFEGVKKAAVGLALQEARVHFDSNLINAEQVAQAVEDAGFGAEIINSGNDVNIAHLKLQGISSPTDMTTIKSLLELAVGVDRVDMDLKGQTVAISYDPDLTGPRSLIQCIRESGQPHTFDANLYAPPRRRDTEQLHEIQTYRNQFLLSCLFSAPVILFSMVLPMLPHYGNWLGYKIHNMFTVGMLLRWILCTPVQFIVGRRFYVGSYYALRRKSANMEVLVALGTNAAYFYSVYIVMKSMASDGFEGQDFFETSSMLISFILLGKYLEVVARGKTSNALAQLADLAPDVAHLLKLDDGGNVILEMEIDTQLIQRNDIIKIVPGEKVSVDGIVMNGHSHVNESMITGEARPTFKKVGDKVIGGTVNENGCLLVKATHVGSDTALSQIVQLVEAAQLARAPVQKLADQISKFFVPAVVLAAFLTWLAWFVSGEMRIYPRHWIPKAMDGFELALQFGISVLVVACPCALGLATPTAVMVASGKGASQGVLIKGGNALEKAHKVKTIVFDKTGTLTVGRPVVVSAVLFSNFSMEEFCDMTVATEANSEHPLAKAVVDHAKKLRQKFGCQNECLTEVKDFEVHPGAGVGGKVGDRSVFVGNKRLMHACNIPIGLEVEQYILEHEQLARTCVLVAIDGKIAGAFAVTDPVKPEAGIVISFLRSKGISSIMVTGDNWSTATAIAKEVGIDKVFAETDPIGKADKIKDLQMQGIIVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIILIKSNLEDVVTAVDLSKKTMSRIRLNYIWALGYNILGVPVAAGILYPFTGIRLPPWLAGACMAASSLSVVCSSLLLQSYKKPLHIKST 936
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2630417 2636840 + Bma005745.2 Bma11g00286 90688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00286 936 SUPERFAMILY Calcium ATPase, transduction domain A 409 494 IPR008250 -
Bma11g00286 936 PRINTS P-type cation-transporting ATPase superfamily signature 815 834 - -
Bma11g00286 936 PRINTS P-type cation-transporting ATPase superfamily signature 444 458 - -
Bma11g00286 936 PRINTS P-type cation-transporting ATPase superfamily signature 740 751 - -
Bma11g00286 936 PRINTS P-type cation-transporting ATPase superfamily signature 762 772 - -
Bma11g00286 936 PRINTS P-type cation-transporting ATPase superfamily signature 838 850 - -
Bma11g00286 936 PRINTS P-type cation-transporting ATPase superfamily signature 608 622 - -
Bma11g00286 936 ProSitePatterns E1-E2 ATPases phosphorylation site. 610 616 IPR018303 -
Bma11g00286 936 Gene3D - 619 748 IPR023299 GO:0000166
Bma11g00286 936 ProSiteProfiles Heavy-metal-associated domain profile. 82 148 IPR006121 GO:0046872
Bma11g00286 936 SUPERFAMILY HAD-like 606 921 IPR036412 -
Bma11g00286 936 PANTHER ATP7, ISOFORM B 76 933 - -
Bma11g00286 936 ProSitePatterns Heavy-metal-associated domain. 87 116 IPR017969 GO:0046872
Bma11g00286 936 CDD P-type_ATPase_Cu-like 249 911 - -
Bma11g00286 936 Gene3D - 76 155 - -
Bma11g00286 936 SFLD C1.7: P-type atpase like 590 866 - -
Bma11g00286 936 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 361 892 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma11g00286 936 SUPERFAMILY HMA, heavy metal-associated domain 153 221 IPR036163 GO:0046872
Bma11g00286 936 CDD HMA 85 147 IPR006121 GO:0046872
Bma11g00286 936 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 321 924 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bma11g00286 936 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 76 933 - -
Bma11g00286 936 SFLD p-type atpase 590 866 IPR044492 -
Bma11g00286 936 Pfam haloacid dehalogenase-like hydrolase 604 829 - -
Bma11g00286 936 SUPERFAMILY HMA, heavy metal-associated domain 78 152 IPR036163 GO:0046872
Bma11g00286 936 ProSiteProfiles Heavy-metal-associated domain profile. 157 223 IPR006121 GO:0046872
Bma11g00286 936 SUPERFAMILY Calcium ATPase, transmembrane domain M 356 600 IPR023298 -
Bma11g00286 936 Gene3D - 156 228 - -
Bma11g00286 936 Pfam E1-E2 ATPase 408 587 - -
Bma11g00286 936 PRINTS Copper-transporting ATPase 1 signature 304 329 - -
Bma11g00286 936 PRINTS Copper-transporting ATPase 1 signature 82 107 - -
Bma11g00286 936 PRINTS Copper-transporting ATPase 1 signature 284 304 - -
Bma11g00286 936 PRINTS Copper-transporting ATPase 1 signature 108 131 - -
Bma11g00286 936 PRINTS Copper-transporting ATPase 1 signature 137 157 - -
Bma11g00286 936 PRINTS Copper-transporting ATPase 1 signature 249 270 - -
Bma11g00286 936 Gene3D - 599 865 IPR023214 -
Bma11g00286 936 Pfam Heavy-metal-associated domain 85 144 IPR006121 GO:0046872
Bma11g00286 936 Gene3D - 376 498 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01648 Bma-Chr7:52074438 Bma11g00286 Bma-Chr11:2630417 3.77E-15 dispersed
Bma09g00255 Bma-Chr9:13222731 Bma11g00286 Bma-Chr11:2630417 7.36E-44 dispersed
Bma11g00286 Bma-Chr11:2630417 Bma01g02192 Bma-Chr1:78803560 1.35E-62 dispersed
Bma11g00286 Bma-Chr11:2630417 Bma11g00287 Bma-Chr11:2651936 7.29E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00286 K17686 - csin:114270619 1339.71