Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00286 | ATGAAATCTAGTCTTGTGTTTTCTTTTTCTGAATTTCGTTTCCAAGCAATCCAAGCTCCCGTAACAAATTCATTTGTTGTCGCATCTCCTGTTGAAAGTCAAAGTGGGGAAAAGCCGATTATTTTGTCTATTTCAGGGTTCACGATGTTTAGATTCTGGGAAAGGAAGATCCTTGAAGCCAATGAGGATGATCTTAAGGTGCCTTTAAATGGATCAATTCTCAATAACGAACAAGATATAGCAGTATGTCGACTAAGAATTAAAGGAATGACATGTACTACCTGTGCTGAATCTGTTGAAAGTGCCCTTCTAATGTTTGAGGGAGTGAAAAAAGCAGCAGTTGGTTTAGCTTTGCAAGAAGCAAGGGTGCATTTTGATTCTAACCTCATCAATGCTGAGCAAGTTGCTCAGGCAGTTGAAGATGCTGGCTTTGGAGCTGAGATAATAAATTCTGGAAATGATGTTAACATAGCTCATCTAAAACTTCAAGGAATTAGTTCTCCAACAGATATGACCACTATAAAATCTTTGCTTGAACTAGCTGTTGGTGTAGATCGTGTTGACATGGACTTAAAAGGACAAACGGTTGCCATCAGCTATGACCCAGACCTCACCGGTCCAAGGTCACTCATACAGTGCATAAGGGAATCAGGCCAACCACACACTTTTGATGCAAACTTGTATGCTCCTCCAAGACGAAGAGATACAGAGCAACTTCATGAAATTCAGACTTACAGAAACCAATTCCTGCTCAGCTGCCTGTTTTCTGCTCCTGTAATTTTATTTTCCATGGTACTTCCCATGCTCCCCCATTATGGAAATTGGTTAGGGTACAAGATTCACAATATGTTTACTGTTGGGATGCTTCTTAGATGGATTCTTTGCACACCTGTTCAGTTTATTGTTGGCCGAAGATTTTATGTGGGATCATACTATGCATTGAGGCGAAAATCTGCCAATATGGAAGTTCTAGTGGCATTAGGCACAAATGCTGCTTACTTTTATTCTGTATACATAGTAATGAAATCAATGGCCTCAGATGGGTTTGAAGGACAAGATTTCTTTGAAACTAGTTCCATGCTAATATCCTTTATTCTCTTGGGGAAATACTTGGAGGTAGTGGCTAGAGGAAAAACCTCCAATGCTTTAGCTCAGCTTGCGGATCTTGCTCCTGATGTAGCTCATCTGTTAAAGTTAGACGATGGTGGGAACGTTATCTTAGAGATGGAAATCGACACTCAATTGATACAGAGGAATGACATTATAAAGATTGTTCCAGGAGAAAAAGTTTCAGTTGACGGGATTGTTATGAATGGTCATAGTCATGTTAATGAGAGTATGATCACAGGAGAGGCTAGGCCAACTTTTAAAAAAGTTGGTGACAAGGTTATTGGCGGCACTGTCAATGAAAATGGATGCTTATTGGTTAAAGCCACCCATGTGGGGTCTGATACTGCACTATCTCAAATTGTTCAACTTGTGGAGGCTGCGCAACTTGCTAGAGCACCTGTTCAGAAATTAGCTGACCAGATATCAAAATTTTTTGTTCCTGCTGTTGTTCTCGCAGCATTTCTAACATGGCTTGCGTGGTTCGTTTCTGGAGAAATGCGTATATATCCTAGGCACTGGATACCAAAGGCCATGGATGGATTTGAGCTTGCATTGCAGTTTGGTATTTCTGTACTAGTGGTTGCCTGCCCATGCGCTCTTGGTCTAGCAACACCAACAGCAGTCATGGTTGCCTCAGGGAAAGGTGCTTCTCAAGGGGTGCTTATCAAAGGTGGAAACGCCTTGGAAAAAGCACACAAGGTGAAAACCATTGTCTTTGATAAGACTGGAACACTAACAGTTGGCCGGCCAGTGGTAGTTAGCGCTGTGCTCTTCTCCAATTTTTCAATGGAGGAATTCTGTGATATGACTGTAGCTACAGAGGCAAATAGCGAACATCCATTAGCAAAAGCTGTGGTAGATCATGCAAAGAAGCTGAGGCAGAAATTTGGGTGCCAAAATGAATGCCTGACAGAGGTGAAGGACTTTGAGGTGCACCCAGGAGCAGGTGTTGGTGGAAAAGTTGGAGACAGATCAGTTTTTGTTGGAAACAAAAGACTCATGCATGCTTGTAATATTCCAATCGGTCTCGAAGTAGAGCAATATATTTTAGAACATGAGCAGCTTGCTCGAACATGTGTACTAGTTGCCATTGATGGAAAGATTGCTGGTGCTTTTGCTGTTACTGATCCTGTAAAGCCTGAGGCTGGGATTGTTATATCCTTTCTTCGTTCGAAGGGCATCTCAAGCATCATGGTTACTGGTGACAACTGGTCTACAGCAACTGCGATTGCAAAGGAGGTGGGTATTGACAAAGTCTTTGCCGAGACAGATCCAATTGGAAAAGCTGATAAGATTAAAGATTTGCAGATGCAAGGGATCATAGTGGCAATGGTAGGGGATGGAATCAATGACTCACCTGCCTTAGTTGCAGCCGATGTTGGTATGGCAATTGGGGCCGGAACAGATATTGCTATAGAAGCAGCTGACATAATTCTCATAAAAAGCAATTTGGAAGATGTTGTTACAGCTGTAGATCTTTCAAAAAAGACCATGTCTCGTATTCGGCTTAACTACATTTGGGCCCTCGGCTATAATATTCTTGGTGTGCCAGTTGCTGCTGGAATCTTATACCCCTTCACTGGGATAAGGTTGCCACCATGGTTAGCTGGTGCTTGCATGGCTGCTTCATCCCTAAGTGTAGTTTGTTCTTCTCTATTGTTGCAATCATACAAGAAGCCTCTGCATATTAAATCTACCTGA | 2811 | 42.08 | MKSSLVFSFSEFRFQAIQAPVTNSFVVASPVESQSGEKPIILSISGFTMFRFWERKILEANEDDLKVPLNGSILNNEQDIAVCRLRIKGMTCTTCAESVESALLMFEGVKKAAVGLALQEARVHFDSNLINAEQVAQAVEDAGFGAEIINSGNDVNIAHLKLQGISSPTDMTTIKSLLELAVGVDRVDMDLKGQTVAISYDPDLTGPRSLIQCIRESGQPHTFDANLYAPPRRRDTEQLHEIQTYRNQFLLSCLFSAPVILFSMVLPMLPHYGNWLGYKIHNMFTVGMLLRWILCTPVQFIVGRRFYVGSYYALRRKSANMEVLVALGTNAAYFYSVYIVMKSMASDGFEGQDFFETSSMLISFILLGKYLEVVARGKTSNALAQLADLAPDVAHLLKLDDGGNVILEMEIDTQLIQRNDIIKIVPGEKVSVDGIVMNGHSHVNESMITGEARPTFKKVGDKVIGGTVNENGCLLVKATHVGSDTALSQIVQLVEAAQLARAPVQKLADQISKFFVPAVVLAAFLTWLAWFVSGEMRIYPRHWIPKAMDGFELALQFGISVLVVACPCALGLATPTAVMVASGKGASQGVLIKGGNALEKAHKVKTIVFDKTGTLTVGRPVVVSAVLFSNFSMEEFCDMTVATEANSEHPLAKAVVDHAKKLRQKFGCQNECLTEVKDFEVHPGAGVGGKVGDRSVFVGNKRLMHACNIPIGLEVEQYILEHEQLARTCVLVAIDGKIAGAFAVTDPVKPEAGIVISFLRSKGISSIMVTGDNWSTATAIAKEVGIDKVFAETDPIGKADKIKDLQMQGIIVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIILIKSNLEDVVTAVDLSKKTMSRIRLNYIWALGYNILGVPVAAGILYPFTGIRLPPWLAGACMAASSLSVVCSSLLLQSYKKPLHIKST | 936 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2630417 | 2636840 | + | Bma005745.2 | Bma11g00286 | 90688 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00286 | 936 | SUPERFAMILY | Calcium ATPase, transduction domain A | 409 | 494 | IPR008250 | - | |
Bma11g00286 | 936 | PRINTS | P-type cation-transporting ATPase superfamily signature | 815 | 834 | - | - | |
Bma11g00286 | 936 | PRINTS | P-type cation-transporting ATPase superfamily signature | 444 | 458 | - | - | |
Bma11g00286 | 936 | PRINTS | P-type cation-transporting ATPase superfamily signature | 740 | 751 | - | - | |
Bma11g00286 | 936 | PRINTS | P-type cation-transporting ATPase superfamily signature | 762 | 772 | - | - | |
Bma11g00286 | 936 | PRINTS | P-type cation-transporting ATPase superfamily signature | 838 | 850 | - | - | |
Bma11g00286 | 936 | PRINTS | P-type cation-transporting ATPase superfamily signature | 608 | 622 | - | - | |
Bma11g00286 | 936 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 610 | 616 | IPR018303 | - | |
Bma11g00286 | 936 | Gene3D | - | 619 | 748 | IPR023299 | GO:0000166 | |
Bma11g00286 | 936 | ProSiteProfiles | Heavy-metal-associated domain profile. | 82 | 148 | IPR006121 | GO:0046872 | |
Bma11g00286 | 936 | SUPERFAMILY | HAD-like | 606 | 921 | IPR036412 | - | |
Bma11g00286 | 936 | PANTHER | ATP7, ISOFORM B | 76 | 933 | - | - | |
Bma11g00286 | 936 | ProSitePatterns | Heavy-metal-associated domain. | 87 | 116 | IPR017969 | GO:0046872 | |
Bma11g00286 | 936 | CDD | P-type_ATPase_Cu-like | 249 | 911 | - | - | |
Bma11g00286 | 936 | Gene3D | - | 76 | 155 | - | - | |
Bma11g00286 | 936 | SFLD | C1.7: P-type atpase like | 590 | 866 | - | - | |
Bma11g00286 | 936 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 361 | 892 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma11g00286 | 936 | SUPERFAMILY | HMA, heavy metal-associated domain | 153 | 221 | IPR036163 | GO:0046872 | |
Bma11g00286 | 936 | CDD | HMA | 85 | 147 | IPR006121 | GO:0046872 | |
Bma11g00286 | 936 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 321 | 924 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bma11g00286 | 936 | PANTHER | COPPER-TRANSPORTING ATPASE HMA5-RELATED | 76 | 933 | - | - | |
Bma11g00286 | 936 | SFLD | p-type atpase | 590 | 866 | IPR044492 | - | |
Bma11g00286 | 936 | Pfam | haloacid dehalogenase-like hydrolase | 604 | 829 | - | - | |
Bma11g00286 | 936 | SUPERFAMILY | HMA, heavy metal-associated domain | 78 | 152 | IPR036163 | GO:0046872 | |
Bma11g00286 | 936 | ProSiteProfiles | Heavy-metal-associated domain profile. | 157 | 223 | IPR006121 | GO:0046872 | |
Bma11g00286 | 936 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 356 | 600 | IPR023298 | - | |
Bma11g00286 | 936 | Gene3D | - | 156 | 228 | - | - | |
Bma11g00286 | 936 | Pfam | E1-E2 ATPase | 408 | 587 | - | - | |
Bma11g00286 | 936 | PRINTS | Copper-transporting ATPase 1 signature | 304 | 329 | - | - | |
Bma11g00286 | 936 | PRINTS | Copper-transporting ATPase 1 signature | 82 | 107 | - | - | |
Bma11g00286 | 936 | PRINTS | Copper-transporting ATPase 1 signature | 284 | 304 | - | - | |
Bma11g00286 | 936 | PRINTS | Copper-transporting ATPase 1 signature | 108 | 131 | - | - | |
Bma11g00286 | 936 | PRINTS | Copper-transporting ATPase 1 signature | 137 | 157 | - | - | |
Bma11g00286 | 936 | PRINTS | Copper-transporting ATPase 1 signature | 249 | 270 | - | - | |
Bma11g00286 | 936 | Gene3D | - | 599 | 865 | IPR023214 | - | |
Bma11g00286 | 936 | Pfam | Heavy-metal-associated domain | 85 | 144 | IPR006121 | GO:0046872 | |
Bma11g00286 | 936 | Gene3D | - | 376 | 498 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g01648 | Bma-Chr7:52074438 | Bma11g00286 | Bma-Chr11:2630417 | 3.77E-15 | dispersed | |
Bma09g00255 | Bma-Chr9:13222731 | Bma11g00286 | Bma-Chr11:2630417 | 7.36E-44 | dispersed | |
Bma11g00286 | Bma-Chr11:2630417 | Bma01g02192 | Bma-Chr1:78803560 | 1.35E-62 | dispersed | |
Bma11g00286 | Bma-Chr11:2630417 | Bma11g00287 | Bma-Chr11:2651936 | 7.29E-63 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00286 | K17686 | - | csin:114270619 | 1339.71 |