Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00290 ATGGAAGCTTTCGAAGGTTTAGAGAGAGAAACAGAGGAGCTGAGAGAGTATTACAGGACAGGGAAAACGAAGGAGGCGTCTTGGAGAAGAGCACAGCTCAAAGGGTTGCTTAAGCTTGTGATAGACAATCAAGAAGACATTTTCAAAGCCCTTGATCAAGACTTGGGAAAGCACCATGTTGAGGCTTTCAGAGACGAGGTAGGAACACTGATCAAGTCCTTAAACTATGCCTTGAAATCTTTCAAGGAATGGATGTCAGGCACAAAGGCTAAACTGCCGATGATCGCGCTTCTTACGACGGCAGAAATCATTCCCGAGCCGCTCGGCCTAGTTCTTGTCATCTCATCGTGGAACTTTCCTTTTGGACTGTCTTTGGAACCGGTCATAGGAGCCTTAGCGGCTGGAAATTGTGTTGTTCTAAAACCTTCAGAGTTAGCCCCTGCTTCTTCTGCGTTACTGGCCAAAACCATTCCCTCTTATGTAGACAACAAAGCTGTCAAAGTTATTCAAGGCGGCCCTGAGGTTGGTCACCAGTTTTTGCAGCAAAAATGGGACAAAATTTTCTTTACTGGGAGTCCTAGAGTTGGCCGGCTCGTGATAACAGCTGCTGCAAAGCATCTAACTCCGGTGACTCTCGAGCTGGGCGGAAAATGCCCGGCCATTTTGGATTCTCTTTCAAGTTCTTGGGATACCCAGGCGGCCATTAAGCGAATTGTCGTCGGAAAATTCGGGACCTGCGCGGGTCAAGCTTGTATCGGAATTGATTATGTGTTAGCGGAGAAGAAGTTCATTTCCAACTTGTTGGAAAAAATGAAGGTGATTATCAAGAATATGCATGGAGAAGATCCAAAACGATCAAACACTATGGCGAGGATTGTGAACAAAAAGCATTTCTTGAGACTGAAAAATCTGATAAAAGATCCATCGGTTCAAGATTTGATCGTTCATGGCGGTTCGATGGACGAAGATGAACTGTTTATTGAGCCGACGATCTTGTTAGATCCGCCACTTGATTCCGACATCATGAGAGAAGAAATCTTCGGCCCTTTACTTCCGATAATCAGTTTGGAAAAGTTGGAAGAAAGCATAGAGTTTATCAACTCAAGGCCTAAACCTCTTGCCATCTATGCATTCACAAAAGATACAGCTTTTCAGAAGAGATTGACTTCTGAAACTTCATCTGGAAGCCTGACCTTCAATGATACCATTGTTCAATACGCAGCAGATACCCTCCCCTTCGGAGGAATCGGGGGAAGCGGGATCGGGAGGTATCACGGGAAGTTCTCGTTCGAGACCTTCAGCCATGAGAAGGTGGTGGTAAGGAGAAGCTTTCTAAGTGACTTTTGGTTCAGATATCCACCATGGAATAACTACAAATTCCAGCTCCTAAAAGACGCCTACAATTATGACTATCTAGCTATGTTTCTGGTCATTACAGGATTAAGGAGGACTTAG 1455 44.88 MEAFEGLERETEELREYYRTGKTKEASWRRAQLKGLLKLVIDNQEDIFKALDQDLGKHHVEAFRDEVGTLIKSLNYALKSFKEWMSGTKAKLPMIALLTTAEIIPEPLGLVLVISSWNFPFGLSLEPVIGALAAGNCVVLKPSELAPASSALLAKTIPSYVDNKAVKVIQGGPEVGHQFLQQKWDKIFFTGSPRVGRLVITAAAKHLTPVTLELGGKCPAILDSLSSSWDTQAAIKRIVVGKFGTCAGQACIGIDYVLAEKKFISNLLEKMKVIIKNMHGEDPKRSNTMARIVNKKHFLRLKNLIKDPSVQDLIVHGGSMDEDELFIEPTILLDPPLDSDIMREEIFGPLLPIISLEKLEESIEFINSRPKPLAIYAFTKDTAFQKRLTSETSSGSLTFNDTIVQYAADTLPFGGIGGSGIGRYHGKFSFETFSHEKVVVRRSFLSDFWFRYPPWNNYKFQLLKDAYNYDYLAMFLVITGLRRT 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2726018 2728804 - Bma005753.1 Bma11g00290 90692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00290 484 SUPERFAMILY ALDH-like 11 457 IPR016161 GO:0016491
Bma11g00290 484 PIRSF ALDH 1 476 IPR012394 GO:0006081
Bma11g00290 484 PANTHER ALDEHYDE DEHYDROGENASE 9 483 - -
Bma11g00290 484 PANTHER ALDEHYDE DEHYDROGENASE 9 483 IPR012394 GO:0006081
Bma11g00290 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Bma11g00290 484 Pfam Aldehyde dehydrogenase family 22 439 IPR015590 GO:0016491
Bma11g00290 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00256 Bma11g00290 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00290 Bma-Chr11:2726018 Bma04g01129 Bma-Chr4:28035143 2.02E-45 dispersed
Bma04g00013 Bma-Chr4:200808 Bma11g00290 Bma-Chr11:2726018 2.28E-148 transposed
Bma06g00107 Bma-Chr6:1523269 Bma11g00290 Bma-Chr11:2726018 0 transposed
Bma06g00492 Bma-Chr6:23112798 Bma11g00290 Bma-Chr11:2726018 6.06E-99 transposed
Bma11g00290 Bma-Chr11:2726018 Bma07g00256 Bma-Chr7:3200181 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00290 K00128 - jre:108985392 691.804