Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00303 ATGTGGTCTGCTCCCTCCAGACAAATCAATTACGGCCTCTCATCGGAGATGGGCATGGTGGGTCTACGCGATGTCTTTGTTGTAGCACCCGCCTCCTCCTTCAACCCCAACAATCATATTCATCACCCGCACGAACCCATCATTTCCGATCATCATTCCATCAACGGGTCGAACCCAACGACTGCCCTCGGCGTCGGCGTTATTCCTCTCCTTACTGCGGCTCACCTCACTCCGCCTAGCCTCGTCGGTGAAGATCAAGATAGTTTAGTGAGTAGAAGCCGAGGTGGTGGAGTTCAACTATGGCAGAATCAGCAATCAAACCATGTTAATTACCTGAAGAAACAAGCTCTTCTCGATCATAATAATTCTGCAAATTTAGTCCTGAGCGGAGGTGGTAACAATGGAGGAGTTGTTGTTTCTGGGTCTACTCCTTCATCAACATTGACTTGCCAAGACTGCGGAAATCAAGCCAAGAAAGATTGCAGCCATAGGCGTTGCAGGACTTGCTGCAAAAGCCGAGGTTTTGATTGCGCAACACATGTTAAAAGTACTTGGGTGCCGGCTTCTCGCCGGAGAGAGCGGCAAACAATGACCATCGGTGCTGCTCCGGCCGCTGGGTCTTCCGCATCGACCTCCGGCTCCAAGAAACCGAAACTAATCACCTCTCAAACAACAACCACCTCGCACACTTCTACTTCTAACACAACTCCTAGAAGCTTTGACACAAGCTCTAGCCATCAAGATATGGGTTTCAAAGAGTCATTTCCTGGACAAGTCCGCGCGCCGGCAGTTTTCAAGTGCGTTAGAGTGACGGCAGTGGAAGATGGAGAAGATGAGTACGCCTACCAAACTGTTGTGAGAATCGGAGGTCATGTTTTCAAAGGGTTTTTGTATGATCAGGGGGTTGAATCAAGAGAGGGGTTCCCTAATATGTCCGACCCACTTTTAGGCAGTGGAAGTGGCGCTGCTCCAAGCGACGCCATAGATTCCGGCAATGGCGACGGAGGAAGAAATAGAGCCACATCTCCAATTCTTAACCATCCGTTAGACGTTTATGCAGCTTCAAGCGGAGGACTGCTCGGAGGTTCCAGCTATGGTAATCCTATGAACTGA 1113 49.87 MWSAPSRQINYGLSSEMGMVGLRDVFVVAPASSFNPNNHIHHPHEPIISDHHSINGSNPTTALGVGVIPLLTAAHLTPPSLVGEDQDSLVSRSRGGGVQLWQNQQSNHVNYLKKQALLDHNNSANLVLSGGGNNGGVVVSGSTPSSTLTCQDCGNQAKKDCSHRRCRTCCKSRGFDCATHVKSTWVPASRRRERQTMTIGAAPAAGSSASTSGSKKPKLITSQTTTTSHTSTSNTTPRSFDTSSSHQDMGFKESFPGQVRAPAVFKCVRVTAVEDGEDEYAYQTVVRIGGHVFKGFLYDQGVESREGFPNMSDPLLGSGSGAAPSDAIDSGNGDGGRNRATSPILNHPLDVYAASSGGLLGGSSYGNPMN 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2862855 2864082 + Bma005765.1 Bma11g00303 90705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00303 370 MobiDBLite consensus disorder prediction 308 343 - -
Bma11g00303 370 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 370 IPR007818 GO:0003700|GO:0006355
Bma11g00303 370 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 255 302 IPR006511 -
Bma11g00303 370 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 370 - -
Bma11g00303 370 MobiDBLite consensus disorder prediction 199 254 - -
Bma11g00303 370 Pfam Domain of unknown function (DUF702) 147 303 - -
Bma11g00303 370 MobiDBLite consensus disorder prediction 201 251 - -
Bma11g00303 370 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 149 191 IPR006510 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00303 Bma14g00754 CCT
Bma07g01484 Bma11g00303 CCT
Bma07g00281 Bma11g00303 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00436 Bma-Chr3:3341899 Bma11g00303 Bma-Chr11:2862855 1.62E-51 dispersed
Bma11g00303 Bma-Chr11:2862855 Bma14g00754 Bma-Chr14:8388277 3.55E-137 dispersed
Bma11g00303 Bma-Chr11:2862855 Bma07g00281 Bma-Chr7:3479871 3.41E-165 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58027 PF05142 DUF702 2.40E-62 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00303 - - vri:117916582 462.611