Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00304 ATGACTTCTCCAGTCCTCGCCATTGTTGGTGAAGAATTAGTCGATGCTCTTCACTCTGTATCTATTCAAGATCAGGGAAAGGTACAAACTAAGGTAGAGATGCAACAAGTACGGAGTGGGGATCATGGAGGTGTTTGTGCAATATGCTTGAATAAGATAAATCTTCAAGAAACTGCTCTTGTCAAAGGTTGCGAGCATGCCTACTGTGTGAACTGCATCCTTCAGTGGGCTTCTTACAGTCAGAAACAAGCTTGCAAGTGCCCTCAATGTAAACATCCGTTCGAGTTCCTCAATGTCCATAGAACGCTTGATGGAAGCATCCAAGATTTCATGTTTGAGGAGAGTGTGTGCCTACTTCTGAGAGCTTCATGGTTCAAGCCGTTGATCGTGGAGGATCAACAGGAAGAAGCTTACGACGACTACGAAGATTATTTGCCGTACGAGGACAAGGAGGATGAAATCGAAGAAGTTTACTTTGGTCGAGCATCTGCAAGTCTCCGAATTGGCAATAGAAGATGGGGAGACAATGGATATGTGAGGGGAGGCCGTCAAGAGGCAAGACCCGTGTGTCGAACAAGTGTTCAAGAAGTGGGTGGGAGCTCGTCCCACGAGCCTAAGAAGAAAGAGGCCATAAACGATAAAACGGGAAGAAGGGCGAAAAGGGCGCTCAAACGAGAAGCTGCAGACAAGGCGGCCGCAGCAAAGCATTTGGAGCACTTGGCAAGGTTAGGCAGGAAGTGA 741 47.37 MTSPVLAIVGEELVDALHSVSIQDQGKVQTKVEMQQVRSGDHGGVCAICLNKINLQETALVKGCEHAYCVNCILQWASYSQKQACKCPQCKHPFEFLNVHRTLDGSIQDFMFEESVCLLLRASWFKPLIVEDQQEEAYDDYEDYLPYEDKEDEIEEVYFGRASASLRIGNRRWGDNGYVRGGRQEARPVCRTSVQEVGGSSSHEPKKKEAINDKTGRRAKRALKREAADKAAAAKHLEHLARLGRK 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2866556 2869924 + Bma005766.1 Bma11g00304 90706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00304 246 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 246 - -
Bma11g00304 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 114 IPR013083 -
Bma11g00304 246 ProSiteProfiles Zinc finger RING-type profile. 46 91 IPR001841 -
Bma11g00304 246 SUPERFAMILY RING/U-box 45 97 - -
Bma11g00304 246 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 246 - -
Bma11g00304 246 MobiDBLite consensus disorder prediction 201 231 - -
Bma11g00304 246 MobiDBLite consensus disorder prediction 195 231 - -
Bma11g00304 246 Pfam Ring finger domain 46 91 IPR001841 -
Bma11g00304 246 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Bma11g00304 246 SMART ring_2 46 90 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00282 Bma11g00304 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00304 Bma-Chr11:2866556 Bma02g00689 Bma-Chr2:25313384 4.51E-06 dispersed
Bma11g00304 Bma-Chr11:2866556 Bma07g00282 Bma-Chr7:3486670 2.89E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00304 - - cit:102609827 296.975