Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00304 | ATGACTTCTCCAGTCCTCGCCATTGTTGGTGAAGAATTAGTCGATGCTCTTCACTCTGTATCTATTCAAGATCAGGGAAAGGTACAAACTAAGGTAGAGATGCAACAAGTACGGAGTGGGGATCATGGAGGTGTTTGTGCAATATGCTTGAATAAGATAAATCTTCAAGAAACTGCTCTTGTCAAAGGTTGCGAGCATGCCTACTGTGTGAACTGCATCCTTCAGTGGGCTTCTTACAGTCAGAAACAAGCTTGCAAGTGCCCTCAATGTAAACATCCGTTCGAGTTCCTCAATGTCCATAGAACGCTTGATGGAAGCATCCAAGATTTCATGTTTGAGGAGAGTGTGTGCCTACTTCTGAGAGCTTCATGGTTCAAGCCGTTGATCGTGGAGGATCAACAGGAAGAAGCTTACGACGACTACGAAGATTATTTGCCGTACGAGGACAAGGAGGATGAAATCGAAGAAGTTTACTTTGGTCGAGCATCTGCAAGTCTCCGAATTGGCAATAGAAGATGGGGAGACAATGGATATGTGAGGGGAGGCCGTCAAGAGGCAAGACCCGTGTGTCGAACAAGTGTTCAAGAAGTGGGTGGGAGCTCGTCCCACGAGCCTAAGAAGAAAGAGGCCATAAACGATAAAACGGGAAGAAGGGCGAAAAGGGCGCTCAAACGAGAAGCTGCAGACAAGGCGGCCGCAGCAAAGCATTTGGAGCACTTGGCAAGGTTAGGCAGGAAGTGA | 741 | 47.37 | MTSPVLAIVGEELVDALHSVSIQDQGKVQTKVEMQQVRSGDHGGVCAICLNKINLQETALVKGCEHAYCVNCILQWASYSQKQACKCPQCKHPFEFLNVHRTLDGSIQDFMFEESVCLLLRASWFKPLIVEDQQEEAYDDYEDYLPYEDKEDEIEEVYFGRASASLRIGNRRWGDNGYVRGGRQEARPVCRTSVQEVGGSSSHEPKKKEAINDKTGRRAKRALKREAADKAAAAKHLEHLARLGRK | 246 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2866556 | 2869924 | + | Bma005766.1 | Bma11g00304 | 90706 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00304 | 246 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 11 | 246 | - | - | |
Bma11g00304 | 246 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 114 | IPR013083 | - | |
Bma11g00304 | 246 | ProSiteProfiles | Zinc finger RING-type profile. | 46 | 91 | IPR001841 | - | |
Bma11g00304 | 246 | SUPERFAMILY | RING/U-box | 45 | 97 | - | - | |
Bma11g00304 | 246 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 11 | 246 | - | - | |
Bma11g00304 | 246 | MobiDBLite | consensus disorder prediction | 201 | 231 | - | - | |
Bma11g00304 | 246 | MobiDBLite | consensus disorder prediction | 195 | 231 | - | - | |
Bma11g00304 | 246 | Pfam | Ring finger domain | 46 | 91 | IPR001841 | - | |
Bma11g00304 | 246 | ProSitePatterns | Zinc finger RING-type signature. | 64 | 73 | IPR017907 | - | |
Bma11g00304 | 246 | SMART | ring_2 | 46 | 90 | IPR001841 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00282 | Bma11g00304 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma11g00304 | Bma-Chr11:2866556 | Bma02g00689 | Bma-Chr2:25313384 | 4.51E-06 | dispersed | |
Bma11g00304 | Bma-Chr11:2866556 | Bma07g00282 | Bma-Chr7:3486670 | 2.89E-116 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00304 | - | - | cit:102609827 | 296.975 |