Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00314 ATGCCCAACTTGACATATTCCGGCACTGCTGCTAAATACGGCACCGTCGACAGTGCTTCTTTGATCGTCGAATCTGACTACTTCATGGCTGTAAATCTCGTCATCAAGAATTCTGCTCCGCGGCCAGACGGGAAGAGAGCAGGAGCACAGGCGGTCGCATTGAGGATCTCCGGCGATAAAGCAGCGTTCTATAACTGCAAACTGATCGGATTTCAAGACACCCTCTGCGATGACAGAGGCAGGCATTTCTTCAAAAACTGTCTCATCGTCGGAACTGTAGATTTCATATTTGGAAGCGGCAGATCTCTCTACCTGAATACACATCTATACGTAGACGTGAAGGACGAAGGATTCACGATAATCACAGCCCATGCAAGGGAACAAGCAGGCGAAAAAACTGGGTATTCGTTCGTGCATGGAAGGGTAGACGGAAGTGGAAAGAACAACACATTCTTAGGACGAGCATGGAAATCACGGCCAAAAGTCGTCTTCTCCTACACAGAGATGTCCCCCGTCGTCAACTCCGCCGGCTGGAGCATCAACTTCCATCCCCAACATGCAAAGACGGTGTATTTTGCAGAATACCAGTGCAGAGGATTAGGCGCCAACCCTGGAAGCAGAGCCGGATTCGCCAAGAAGTTGACCGGCGGTGAAGCGAAACCCTTCGTCACTTTGGATTACGTTCAGGGTTCCAGTTGGCTGCTTCCACCTCCTCGTCTCTAA 723 50.35 MPNLTYSGTAAKYGTVDSASLIVESDYFMAVNLVIKNSAPRPDGKRAGAQAVALRISGDKAAFYNCKLIGFQDTLCDDRGRHFFKNCLIVGTVDFIFGSGRSLYLNTHLYVDVKDEGFTIITAHAREQAGEKTGYSFVHGRVDGSGKNNTFLGRAWKSRPKVVFSYTEMSPVVNSAGWSINFHPQHAKTVYFAEYQCRGLGANPGSRAGFAKKLTGGEAKPFVTLDYVQGSSWLLPPPRL 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2964856 2965834 + Bma005774.1 Bma11g00314 90716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00314 240 ProSitePatterns Pectinesterase signature 2. 89 98 IPR033131 -
Bma11g00314 240 Pfam Pectinesterase 12 230 IPR000070 GO:0030599|GO:0042545
Bma11g00314 240 PANTHER PECTINESTERASE 63-RELATED 1 235 - -
Bma11g00314 240 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 235 - -
Bma11g00314 240 Gene3D - 3 236 IPR012334 -
Bma11g00314 240 SUPERFAMILY Pectin lyase-like 10 234 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00314 Bma-Chr11:2964856 Bma14g00694 Bma-Chr14:7557918 2.52E-61 dispersed
Bma11g00314 Bma-Chr11:2964856 Bma09g00382 Bma-Chr9:32554833 1.95E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00314 K01051 - zju:107414090 342.813