Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00315 ATGTACGAGTTTTATAAGCTGACAGAAGATGAGAATAGAGTGCATGATTATATGTATTCACAGCGAGACATAAATGCTAAAATGAGATCGATTCTAATAGACTGGTTGATTGAAGTTCATCATAAATTTGAACTCATGCCGGAGACTCTTTACTTAACGGTATACATCGTCGATCAATTTCTTTCCGTTAAGGCGGTACGAAGGAAAGAGCTTCAGTTAGTCGGCATAAGTTCCATGCTTTTAGCATGCAAGTACGAAGAAATTTGGGCTCCTGAGGTAAATGACTTTGTAAGTATATCAGCTCATGCTTATGTAAGAGAACAAGTTCTTGTGATGGAGAAAACAATTCTTGGAAAGCTCGAATGGCAATTAACAGTTCCAACTCCTTACGTTTTCCTGGTTCGTTTCATTAAAGCTTCTGAATCATCCGATGAGCAGATGGAAAGTATGGTTTATTTCCTGGCTGAGCTTGGTTTAATGCACTATCTCACCATCGTTTCTCATTGCCCTTCTATGCTTGCTGCTTCTGCTGTTTATGCTGCGAGATGTACACTTGATAAATTGCCTTACTGGACTGCAACTCTAGAACACCACACTGGCTATTTCGAAGACCAGCTCAAGGAATGTGCAAAAATCTTGGTTGGCTTGCATTTCGGAGCAGCTGCCGGTAACCTTAAGGCGGTGTATCGGAAATATACGAGTTCCGATCATTTTGCTGTTGCTCTTCTTAATCCTGCAGAAATGCTAAATGGAAATTCGTTGGATTTCTACTCAGTGTAA 780 40.26 MYEFYKLTEDENRVHDYMYSQRDINAKMRSILIDWLIEVHHKFELMPETLYLTVYIVDQFLSVKAVRRKELQLVGISSMLLACKYEEIWAPEVNDFVSISAHAYVREQVLVMEKTILGKLEWQLTVPTPYVFLVRFIKASESSDEQMESMVYFLAELGLMHYLTIVSHCPSMLAASAVYAARCTLDKLPYWTATLEHHTGYFEDQLKECAKILVGLHFGAAAGNLKAVYRKYTSSDHFAVALLNPAEMLNGNSLDFYSV 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2966020 2967124 - Bma005775.1 Bma11g00315 90717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00315 259 Gene3D - 14 125 - -
Bma11g00315 259 PANTHER CYCLIN-B1-4 1 248 - -
Bma11g00315 259 Pfam Cyclin, N-terminal domain 3 124 IPR006671 -
Bma11g00315 259 PANTHER CYCLINS 1 248 IPR039361 -
Bma11g00315 259 SMART Cyclin_C_2 127 246 IPR004367 -
Bma11g00315 259 PIRSF Cyclin_A_B_D_E 1 257 IPR039361 -
Bma11g00315 259 CDD CYCLIN 125 214 IPR013763 -
Bma11g00315 259 CDD CYCLIN 28 117 IPR013763 -
Bma11g00315 259 Gene3D - 1 242 - -
Bma11g00315 259 SUPERFAMILY Cyclin-like 126 249 IPR036915 -
Bma11g00315 259 Pfam Cyclin, C-terminal domain 127 244 IPR004367 -
Bma11g00315 259 SMART cyclin_7 34 118 IPR013763 -
Bma11g00315 259 SMART cyclin_7 131 215 IPR013763 -
Bma11g00315 259 SUPERFAMILY Cyclin-like 6 124 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02702 Bma-Chr1:84443833 Bma11g00315 Bma-Chr11:2966020 5.92E-119 dispersed
Bma06g00078 Bma-Chr6:1217076 Bma11g00315 Bma-Chr11:2966020 3.70E-76 dispersed
Bma09g00495 Bma-Chr9:41061080 Bma11g00315 Bma-Chr11:2966020 1.54E-140 dispersed
Bma11g00315 Bma-Chr11:2966020 Bma07g00293 Bma-Chr7:3670622 1.12E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00315 K21777 - twl:119990905 394.045