Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00322 | ATGGAAGCTCGTTTCTCTGTGCTGCTACTGATCGTTCTGTTTCATCTTCTAGCTCTAACCCTCGTTTCATCTTCCCCAGTTCAAGACACTGAATCTGTTGTTCAAGAAGTTCTTACGAGAATCAACAATGCCACCATTAGCAGAAGAAACCTGGGTTATCTCTCGTGTGGTACGGGAAACCCCATTGACGACTGCTGGAGGTGCGACCCCAAGTGGGAGACTAACCGGCAGCGCCTTGCAGACTGCGCTATCGGGTTTGGCAAGCGAGCCATCGGCGGCCGTGACGGGAAAATTTACGTCGTTACTGATCCGACTGATAAAGACGTCGTGAATCCTAAACTGGGTACTCTCCGTCACGCCGTCATCCAAGACGAACCCCTTTGGATCATCTTCAGCCGGGATATGGTCATCAAGCTAAGAGAAGAGCTCATCATGAACTCCTTCAAGACAATCGATGGCCGCGGCGTCAGCGTCCACGTCGCCGGCGGACCTTGCATTACGATTCAGTACGTGACCAACATCATAATTCACGGCGTCCACATTCACGATTGCAAGGTCGGAGGAAACGCCTACGTGAGAGACTCGCCGGACCATTACGGGTGGCGGACGAGGTCGGACGGAGATGGGGTTTCGATCTTCGGAGGAAGCCATATTTGGGTGGACCATTGCACTCTGTCAAACTGCAATGATGGTCTGATAGACGCCATTCATGGATCTACAGCCATCACCATATCCAACAATTATATGACTCACCATGACAAAGTCATGCTTTTGGGCCATAGCGATTCCTACTCACCAGACAAGAACATGCAAGTGACCATAGCTTTCAACCATTTCGGAGAAGGACTAGTCCAGAGAATTCCCAGGTGTAGGCATGGGTATTTCCATGTGGTGAATAATGACTATACGCATTGGGAGATGTACGCGCTTGGAGGTAGTGCGGCTCCGACAATCAACAGCCAAGGCAACAGATTTCTAGCGCCAAACGACGCCGACAACAAAGAGGTGACGAAGCACGAGGACGCAGCAGAGAAAGAATGGAGAAAGTGGAATTGGAGGTCGGAGGGAGATTTGATGCTAAACGGAGCGTCTTTCACGAGATCTGGAGCAAGCGCATCCTCCAGCTACGCTAAGGCGTCGAGTCTGAGCGCAAGGCCGTCGGCGCTCGTCAGTTCACTCACCGGCGGCGCCGGCGCTCTTAGTTGCAAGAAGGGTTCTCGCTGCTGA | 1227 | 52.08 | MEARFSVLLLIVLFHLLALTLVSSSPVQDTESVVQEVLTRINNATISRRNLGYLSCGTGNPIDDCWRCDPKWETNRQRLADCAIGFGKRAIGGRDGKIYVVTDPTDKDVVNPKLGTLRHAVIQDEPLWIIFSRDMVIKLREELIMNSFKTIDGRGVSVHVAGGPCITIQYVTNIIIHGVHIHDCKVGGNAYVRDSPDHYGWRTRSDGDGVSIFGGSHIWVDHCTLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYSPDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYALGGSAAPTINSQGNRFLAPNDADNKEVTKHEDAAEKEWRKWNWRSEGDLMLNGASFTRSGASASSSYAKASSLSARPSALVSSLTGGAGALSCKKGSRC | 408 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3033648 | 3035087 | - | Bma005783.1 | Bma11g00322 | 90724 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00322 | 408 | SMART | amb_all | 134 | 331 | IPR002022 | - | |
Bma11g00322 | 408 | PRINTS | Pollen allergen Amb family signature | 206 | 227 | IPR018082 | - | |
Bma11g00322 | 408 | PRINTS | Pollen allergen Amb family signature | 350 | 374 | IPR018082 | - | |
Bma11g00322 | 408 | PRINTS | Pollen allergen Amb family signature | 142 | 158 | IPR018082 | - | |
Bma11g00322 | 408 | PRINTS | Pollen allergen Amb family signature | 308 | 327 | IPR018082 | - | |
Bma11g00322 | 408 | PRINTS | Pollen allergen Amb family signature | 379 | 402 | IPR018082 | - | |
Bma11g00322 | 408 | PRINTS | Pollen allergen Amb family signature | 82 | 99 | IPR018082 | - | |
Bma11g00322 | 408 | PRINTS | Pollen allergen Amb family signature | 286 | 305 | IPR018082 | - | |
Bma11g00322 | 408 | PRINTS | Pollen allergen Amb family signature | 106 | 131 | IPR018082 | - | |
Bma11g00322 | 408 | PANTHER | PECTATE LYASE | 10 | 405 | - | - | |
Bma11g00322 | 408 | Gene3D | - | 59 | 401 | IPR012334 | - | |
Bma11g00322 | 408 | Pfam | Pectate lyase | 145 | 325 | IPR002022 | - | |
Bma11g00322 | 408 | PANTHER | PECTATE LYASE 18-RELATED | 10 | 405 | IPR045032 | GO:0030570 | |
Bma11g00322 | 408 | SUPERFAMILY | Pectin lyase-like | 48 | 402 | IPR011050 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00759 | Bma-Chr3:6924428 | Bma11g00322 | Bma-Chr11:3033648 | 0 | dispersed | |
Bma06g00238 | Bma-Chr6:3163295 | Bma11g00322 | Bma-Chr11:3033648 | 0 | dispersed | |
Bma11g00322 | Bma-Chr11:3033648 | Bma13g00568 | Bma-Chr13:12104081 | 0 | dispersed | |
Bma11g00322 | Bma-Chr11:3033648 | Bma07g00295 | Bma-Chr7:3681275 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00322 | K01728 | - | tcc:18609637 | 692.189 |