Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00324 | ATGGCTATAGCAGCTCCAGGGCAGCTCAATCTTAACGAGTCCCCTTCTTGGGGATCTAGAAGTGTCGATTGCTTTGAAAAATTAGAGCAGATCGGCGAGGGAACTTATGGGCAAGTTTATATGGCAAAAGAAATAAAGACAGGTGAAATTGTTGCTTTGAAGAAAATACGAATGGACAATGAAAGAGAGGGGTTTCCAATAACAGCCATTCGAGAAATCAAAATTTTGAAGAAGCTGCATCATGAGAATGTTATCAAATTGAAAGAGATTGTAACATCTCCAGGTCCTGAGAAGGATGATCAAGGAAAGCAAGGCAAGTCAGCAGTTGTCAAGCCTTATAATAGTTCAGATGGCAACAAGTATAAGGGTGGCATCTACATGGTATTTGAGTATATGGACCATGATCTAACCGGACTTGCAGATCGTCCTGGTATGAGATTTTCAGTACCACAAATCAAGTGTTACATGAAACAGCTTTTGACTGGACTTTATTATTGTCACGTGAACCAAGTACTACACCGAGACATCAAAGGGTCTAACCTTCTCATCGACAATGAAGGAAATTTGAAGCTTGCTGATTTTGGGCTTGCACGATCATTCTCTAATGATCACAATGCAAATCTTACAAATCGTGTAATTACCTTATGGTATAGACCTCCAGAATTGCTGCTTGGAGCAACAAAATATGGTCCAGCAGTTGATATGTGGTCTGTGGGTTGTATTTTTGCTGAACTTTTACACGGGAAGCCAATTTTCCCGGGAAAGGATGAGCCAGAGCAATTGAATAAGATTTTTGAGTTATGCGGTGCTCCCGATGAAGTTAATTGGCCTGGGGTTTCAAAGATTCCTTGGTATAACAATTTCAAACCGACAAGGCCAATGAAGAGGCGAATTAGGGAGGTTTTCAGGCACTTTGACCGGCATGCTTTAGAGCTATTAGAGAAGATGCTCACTCTTGATCCCTCTCAGAGGATATCTGCAAAGGATGCGCTTGATGCTGAGTATTTTTGGACTGATCCCTTGCCCTGTGATCCGAAGAGTTTACCCAAGTATGAGTCATCCCACGAGTTTCAAACAAAGAAAAAACGGCAGCAGCAACGACAGCACGAAGAGACTGCGAAACGTCAGAAACTGCAACACCCACCACCACACACTCGCCTCCCCCCCATCCAGCAGTCTGGGCAGGCTCATGCTCAGATACGACCAGGAGCCAACCAGCCTGGCCATGGCTCTCAACAGCCAGTTGCTGCAGGCCCCAGCCATCATTTTGGGAAGCCTCGTGGCCCCTCGGGAGGTGGTCCTGGCAGGTACCCGGGGAGTGGTAATCCTGCAGGGGGATACAACCATCCCAATCGAGGAGGCCAAGGAGGAGGAGGAGGAGGTGGAGGCTTTGGCAGTGGGCAGTATCCGCAAGGGCGAGGCCCACCGTATGGGTCTAGTGGCATGTCTAATGCTGCTCCTCGGGGAGGTGGAGGTAGCGGTTATGGAGTCCCTCCAAACTATCCGCAGGGAGGAGGGCCGTACGGTAGCTCTGGCACTGGTCGCGGGTCAAACATGATGGGCGGAAGCCGCAATCAACAATATGGATGGCAGCAA | 1596 | 47.68 | MAIAAPGQLNLNESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDDQGKQGKSAVVKPYNSSDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMKQLLTGLYYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRIREVFRHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHPPPHTRLPPIQQSGQAHAQIRPGANQPGHGSQQPVAAGPSHHFGKPRGPSGGGPGRYPGSGNPAGGYNHPNRGGQGGGGGGGGFGSGQYPQGRGPPYGSSGMSNAAPRGGGGSGYGVPPNYPQGGGPYGSSGTGRGSNMMGGSRNQQYGWQQ | 532 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3049421 | 3056577 | + | Bma030433 | Bma11g00324 | 90726 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00324 | 532 | CDD | STKc_CDK9_like | 25 | 336 | - | - | |
Bma11g00324 | 532 | ProSiteProfiles | Protein kinase domain profile. | 25 | 336 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00324 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 134 | 376 | - | - | |
Bma11g00324 | 532 | MobiDBLite | consensus disorder prediction | 349 | 378 | - | - | |
Bma11g00324 | 532 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 344 | IPR011009 | - | |
Bma11g00324 | 532 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524 | |
Bma11g00324 | 532 | PANTHER | CYCLIN-DEPENDENT KINASE C-2 | 5 | 466 | - | - | |
Bma11g00324 | 532 | MobiDBLite | consensus disorder prediction | 93 | 113 | - | - | |
Bma11g00324 | 532 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 171 | 183 | IPR008271 | GO:0004672|GO:0006468 | |
Bma11g00324 | 532 | PANTHER | CELL DIVISION PROTEIN KINASE | 5 | 466 | - | - | |
Bma11g00324 | 532 | Pfam | Protein kinase domain | 25 | 336 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00324 | 532 | MobiDBLite | consensus disorder prediction | 389 | 413 | - | - | |
Bma11g00324 | 532 | MobiDBLite | consensus disorder prediction | 347 | 532 | - | - | |
Bma11g00324 | 532 | MobiDBLite | consensus disorder prediction | 506 | 532 | - | - | |
Bma11g00324 | 532 | SMART | serkin_6 | 25 | 336 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00324 | 532 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 133 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00022 | Bma-Chr1:345531 | Bma11g00324 | Bma-Chr11:3049421 | 1.63E-92 | dispersed | |
Bma08g01208 | Bma-Chr8:51074399 | Bma11g00324 | Bma-Chr11:3049421 | 1.84E-85 | dispersed | |
Bma11g00324 | Bma-Chr11:3049421 | Bma04g00318 | Bma-Chr4:2543533 | 4.07E-119 | dispersed | |
Bma15g00419 | Bma-Chr15:4536492 | Bma11g00324 | Bma-Chr11:3049421 | 5.37E-70 | dispersed | |
Bma11g00324 | Bma-Chr11:3049421 | Bma02g01380 | Bma-Chr2:56137511 | 3.54E-115 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66772 | PF00069 | Pkinase | 6.00E-74 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00324 | K08819 | - | mnt:21403150 | 905.59 |