Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00324 ATGGCTATAGCAGCTCCAGGGCAGCTCAATCTTAACGAGTCCCCTTCTTGGGGATCTAGAAGTGTCGATTGCTTTGAAAAATTAGAGCAGATCGGCGAGGGAACTTATGGGCAAGTTTATATGGCAAAAGAAATAAAGACAGGTGAAATTGTTGCTTTGAAGAAAATACGAATGGACAATGAAAGAGAGGGGTTTCCAATAACAGCCATTCGAGAAATCAAAATTTTGAAGAAGCTGCATCATGAGAATGTTATCAAATTGAAAGAGATTGTAACATCTCCAGGTCCTGAGAAGGATGATCAAGGAAAGCAAGGCAAGTCAGCAGTTGTCAAGCCTTATAATAGTTCAGATGGCAACAAGTATAAGGGTGGCATCTACATGGTATTTGAGTATATGGACCATGATCTAACCGGACTTGCAGATCGTCCTGGTATGAGATTTTCAGTACCACAAATCAAGTGTTACATGAAACAGCTTTTGACTGGACTTTATTATTGTCACGTGAACCAAGTACTACACCGAGACATCAAAGGGTCTAACCTTCTCATCGACAATGAAGGAAATTTGAAGCTTGCTGATTTTGGGCTTGCACGATCATTCTCTAATGATCACAATGCAAATCTTACAAATCGTGTAATTACCTTATGGTATAGACCTCCAGAATTGCTGCTTGGAGCAACAAAATATGGTCCAGCAGTTGATATGTGGTCTGTGGGTTGTATTTTTGCTGAACTTTTACACGGGAAGCCAATTTTCCCGGGAAAGGATGAGCCAGAGCAATTGAATAAGATTTTTGAGTTATGCGGTGCTCCCGATGAAGTTAATTGGCCTGGGGTTTCAAAGATTCCTTGGTATAACAATTTCAAACCGACAAGGCCAATGAAGAGGCGAATTAGGGAGGTTTTCAGGCACTTTGACCGGCATGCTTTAGAGCTATTAGAGAAGATGCTCACTCTTGATCCCTCTCAGAGGATATCTGCAAAGGATGCGCTTGATGCTGAGTATTTTTGGACTGATCCCTTGCCCTGTGATCCGAAGAGTTTACCCAAGTATGAGTCATCCCACGAGTTTCAAACAAAGAAAAAACGGCAGCAGCAACGACAGCACGAAGAGACTGCGAAACGTCAGAAACTGCAACACCCACCACCACACACTCGCCTCCCCCCCATCCAGCAGTCTGGGCAGGCTCATGCTCAGATACGACCAGGAGCCAACCAGCCTGGCCATGGCTCTCAACAGCCAGTTGCTGCAGGCCCCAGCCATCATTTTGGGAAGCCTCGTGGCCCCTCGGGAGGTGGTCCTGGCAGGTACCCGGGGAGTGGTAATCCTGCAGGGGGATACAACCATCCCAATCGAGGAGGCCAAGGAGGAGGAGGAGGAGGTGGAGGCTTTGGCAGTGGGCAGTATCCGCAAGGGCGAGGCCCACCGTATGGGTCTAGTGGCATGTCTAATGCTGCTCCTCGGGGAGGTGGAGGTAGCGGTTATGGAGTCCCTCCAAACTATCCGCAGGGAGGAGGGCCGTACGGTAGCTCTGGCACTGGTCGCGGGTCAAACATGATGGGCGGAAGCCGCAATCAACAATATGGATGGCAGCAA 1596 47.68 MAIAAPGQLNLNESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDDQGKQGKSAVVKPYNSSDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMKQLLTGLYYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRIREVFRHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHPPPHTRLPPIQQSGQAHAQIRPGANQPGHGSQQPVAAGPSHHFGKPRGPSGGGPGRYPGSGNPAGGYNHPNRGGQGGGGGGGGFGSGQYPQGRGPPYGSSGMSNAAPRGGGGSGYGVPPNYPQGGGPYGSSGTGRGSNMMGGSRNQQYGWQQ 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3049421 3056577 + Bma030433 Bma11g00324 90726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00324 532 CDD STKc_CDK9_like 25 336 - -
Bma11g00324 532 ProSiteProfiles Protein kinase domain profile. 25 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00324 532 Gene3D Transferase(Phosphotransferase) domain 1 134 376 - -
Bma11g00324 532 MobiDBLite consensus disorder prediction 349 378 - -
Bma11g00324 532 SUPERFAMILY Protein kinase-like (PK-like) 19 344 IPR011009 -
Bma11g00324 532 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Bma11g00324 532 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 466 - -
Bma11g00324 532 MobiDBLite consensus disorder prediction 93 113 - -
Bma11g00324 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bma11g00324 532 PANTHER CELL DIVISION PROTEIN KINASE 5 466 - -
Bma11g00324 532 Pfam Protein kinase domain 25 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00324 532 MobiDBLite consensus disorder prediction 389 413 - -
Bma11g00324 532 MobiDBLite consensus disorder prediction 347 532 - -
Bma11g00324 532 MobiDBLite consensus disorder prediction 506 532 - -
Bma11g00324 532 SMART serkin_6 25 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00324 532 Gene3D Phosphorylase Kinase; domain 1 14 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00022 Bma-Chr1:345531 Bma11g00324 Bma-Chr11:3049421 1.63E-92 dispersed
Bma08g01208 Bma-Chr8:51074399 Bma11g00324 Bma-Chr11:3049421 1.84E-85 dispersed
Bma11g00324 Bma-Chr11:3049421 Bma04g00318 Bma-Chr4:2543533 4.07E-119 dispersed
Bma15g00419 Bma-Chr15:4536492 Bma11g00324 Bma-Chr11:3049421 5.37E-70 dispersed
Bma11g00324 Bma-Chr11:3049421 Bma02g01380 Bma-Chr2:56137511 3.54E-115 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66772 PF00069 Pkinase 6.00E-74 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00324 K08819 - mnt:21403150 905.59