Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00349 ATGGCTTCTTCTCTGTTGCAGCTAAACGCCATCCATCTACTTTTTGCATATCTTCTCTTTTTGGAAGCTGTTTCTGCTGATCCTCCTTATATGAACTGTCCCAACTCAACCGATACAGAACCAAGTCCTATGTTCAAGGAAAACTTGAAAATCTTGCTGAATTCTCTGTCCTCCAATGCTTCTGTTATGAAGTTCCATACATCTTCCACTGGAAGCAATAACGATTCAGTTTATGGACTCTACATGTGCTATAACTATCTTTCGATTCCAGATTGCAGTAATTGTATTGCCACCGCTTCACAAAATCTACTCAGTCGCTGTCCGACGAGTTTAGAAGCGATGGTTTGGGAAGAAAACTGCCAGGCGAGATACTCGAACGGAAAGTTCTTCGGCCGATTGGATGTTTCGAGCAACATGAAAAAGGACAACATTGAGAGCATCTCCGAACCTCAGCTGTTCTACGAGAAAGTGAGAGGATTGCTGAGTAATCTGACTGAGCAGGCCACTTTTAACGTCTCCTTGAACATGTTTGCGACGGGAGAAACACCCTTCTTCGAGAAGACTTTATACAGTTTAGTTCAATGCACGACGGACTTGTCTGCTGAAAGCTGTGAGAAATGCCTGCAAAGGGCCATGGCCGACGTCTTTGAATGCTGCAACAGCTCAATGGGTGCTAGAATTCTCAGCCCAAGTTGCTATTTGAGGTATGAGCTGTACTCTTTCTATGGAGCTTCATCCAACACCACCGACCATTCTACTCCTCCAGGAAGTTCGTCACGGAAACTATCGAGGATTGTTATTGTTTTAGCAATTTCGGCATGTTTGGGTGTGGCGCTCGTGGGTTTTTCTGCCTATATTCTTGCAATCAGAAAGAGAAGGAAGGATCGAACTCTTGGAAGCATCGACGATCCAACGCCGACAGAAATTCAAATTCGAAAACTCGAGGGAATATATAAATCAAAAGATCAGGAGTTTCCTTTTATCGACTTTGCATCTCTATCTGCTGCAACTGATCATTTCTCCGAGTCAAACAAGCTCGGAGAAGGCGGATTTGGCCCTGTATACAAGGGTAGACTAGACGATGGGAAGGAAGTTGCTGTGAAGAGGCTAGCAAATTGTTCTGCGCAGGGTGCAAGAGAGTTCATAACTGAAGTGATGCTGATAATCAAACTTCAACACAAGAATTTGGTAAGACTTCTGGGGTTTTGTGCATATGGAGATGAGAAGCTGCTAGTCTATGAATACATGCCCAACAGCAGCCTAGACGTCTTTCTCTTCGATTCGCTAAAACGAGCAAAACTTGATTGGAATACGCGTCTGAATATTATCCGAGGGATCGCGCGCGGAGTCCTCTATCTGCATGAAGACTCTCGGCTCAAAATCATTCATAGAGACTTGAAAGCTAGCAACGTGTTATTGGATCAAGACATGAACCCCAAAATCTCTGATTTTGGAATGGCCAGGATCTTTGCAGGGTGTGAGGCAGAATCTAATACTGCAACCGTTGTTGGCACCTACGGGTATATGGCTCCGGAATATGCTATGGAGGGATTATACTCCATAAAATCCGATGTTTTTAGCTTCGGAATACTCTTGTTGGAGACCATAACCGGACAAAAGAGCACCGGTTTTCATCGGACCAAAATTGCTTCTAGTCTACAAGCATACGTATGGCAAATATGGAACGACGGCAGATGGACTGATCTAGTCGACCCTTCTGCTGGTCGGTGCAGCAGAGATGAAGTTGTTAGGCACGTTCACATCGGGTTGCTGTGCACTCAAGAAGATCCAAGTGAGAGACCGACAATGTCGACTGTACTCATGATGCTCGGTAGCGAAGGAATGCTTCTTCCACAACCAGGAAGACCAGCCTTGCTGGTGGCAAGATACAGTTCTCGCAAAGAAGATGAAATCAACTCCAATCAGACCAGAAATGATTTAACAATTTCTGATCTACACCCAAGATGA 1968 44.66 MASSLLQLNAIHLLFAYLLFLEAVSADPPYMNCPNSTDTEPSPMFKENLKILLNSLSSNASVMKFHTSSTGSNNDSVYGLYMCYNYLSIPDCSNCIATASQNLLSRCPTSLEAMVWEENCQARYSNGKFFGRLDVSSNMKKDNIESISEPQLFYEKVRGLLSNLTEQATFNVSLNMFATGETPFFEKTLYSLVQCTTDLSAESCEKCLQRAMADVFECCNSSMGARILSPSCYLRYELYSFYGASSNTTDHSTPPGSSSRKLSRIVIVLAISACLGVALVGFSAYILAIRKRRKDRTLGSIDDPTPTEIQIRKLEGIYKSKDQEFPFIDFASLSAATDHFSESNKLGEGGFGPVYKGRLDDGKEVAVKRLANCSAQGAREFITEVMLIIKLQHKNLVRLLGFCAYGDEKLLVYEYMPNSSLDVFLFDSLKRAKLDWNTRLNIIRGIARGVLYLHEDSRLKIIHRDLKASNVLLDQDMNPKISDFGMARIFAGCEAESNTATVVGTYGYMAPEYAMEGLYSIKSDVFSFGILLLETITGQKSTGFHRTKIASSLQAYVWQIWNDGRWTDLVDPSAGRCSRDEVVRHVHIGLLCTQEDPSERPTMSTVLMMLGSEGMLLPQPGRPALLVARYSSRKEDEINSNQTRNDLTISDLHPR 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3443747 3450921 + Bma005807.1 Bma11g00349 90751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00349 655 SMART serkin_6 340 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00349 655 Gene3D Phosphorylase Kinase; domain 1 307 415 - -
Bma11g00349 655 Gene3D Transferase(Phosphotransferase) domain 1 416 615 - -
Bma11g00349 655 SUPERFAMILY Protein kinase-like (PK-like) 325 610 IPR011009 -
Bma11g00349 655 CDD STKc_IRAK 346 610 - -
Bma11g00349 655 ProSiteProfiles Gnk2-homologous domain profile. 27 129 IPR002902 -
Bma11g00349 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Bma11g00349 655 Pfam Protein tyrosine and serine/threonine kinase 343 609 IPR001245 GO:0004672|GO:0006468
Bma11g00349 655 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 26 653 - -
Bma11g00349 655 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 653 - -
Bma11g00349 655 MobiDBLite consensus disorder prediction 636 655 - -
Bma11g00349 655 ProSiteProfiles Gnk2-homologous domain profile. 135 241 IPR002902 -
Bma11g00349 655 Pfam Salt stress response/antifungal 33 126 IPR002902 -
Bma11g00349 655 Pfam Salt stress response/antifungal 148 239 IPR002902 -
Bma11g00349 655 ProSiteProfiles Protein kinase domain profile. 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00349 655 Gene3D - 135 241 IPR038408 -
Bma11g00349 655 Gene3D - 28 129 IPR038408 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00967 Bma-Chr1:9536752 Bma11g00349 Bma-Chr11:3443747 2.97E-97 dispersed
Bma11g00349 Bma-Chr11:3443747 Bma11g00351 Bma-Chr11:3753381 5.61E-164 dispersed
Bma13g00268 Bma-Chr13:4504176 Bma11g00349 Bma-Chr11:3443747 9.40E-16 dispersed
Bma11g00349 Bma-Chr11:3443747 Bma11g00350 Bma-Chr11:3659451 5.72E-160 tandem
Bma04g01224 Bma-Chr4:35257622 Bma11g00349 Bma-Chr11:3443747 4.46E-38 transposed
Bma05g00963 Bma-Chr5:48086594 Bma11g00349 Bma-Chr11:3443747 5.38E-139 transposed
Bma13g00026 Bma-Chr13:357336 Bma11g00349 Bma-Chr11:3443747 3.05E-06 transposed
Bma11g00349 Bma-Chr11:3443747 Bma07g00320 Bma-Chr7:3862097 3.03E-159 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66773 PF07714 PK_Tyr_Ser-Thr 2.50E-48 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00349 - - qlo:115991136 704.901