Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00351 ATGGCTGTAACTCGTCTCCTGATTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAACCCCGCTTAGCGCACAGCCAGACTTCCGTTACCACGTATGCAATGAAGGCAATGGGAATTACACTGCCAACGACTCCTACAGCGCCAACCTCCACGACCTCCTCTCCTCCATTTTGACACTTGACTACGTCTACTACGGATTTTTCAATTTCTCTCTCGGCCAAAATTCCAATGCCGCCAACGCAATCGGGCTTTGCAGGGGCGACATCGATTCCGCTGCTTGCCGGAGCTGCCTAAACGACTCTAGGATCCTCCTCCCGCGGCTTTGTCCGAATCGGAAGGAAGCTATCGGGTGGTACAATACTTGCATGTTGAAATACTCCAATCGGAGCATATTTGGACTGATGGAGACGGATCCAGCTCCTATTATATGGACTACAGCTAATGTTTCGGATTGGGATCAGTATTACAGAGATCTTCGGACATTGTTGGATGATTTGAAAGGTAAAGCTGCGGGCGGTAGCTCTCTGTTAAAATATGAGGCAGGAAGTGCCTCGACGTCGAATTTCAGAACTCTCTATGCTCTTCTACAGTGTACACCTGATTTGTCTGAGCAAGAATGCGACGATTGCTTGACTACTTCGATTAGAAAAATTCCATCTTGTTGTTCTGGGAGTGTTATAGTGAGTGCACCTAGTTGTTATTTGAGATACGAAGAGTATCGGTTCTATCAGCCTTCTTTGCCGCAATCGCCGCCGCCTCTGCTATCCCCTCCTCCAGCAAGAGTAGGCGAAGAAGGAGAACAAAGTAACAGAGCTAGAACCATCATTATCATTGTTGTCACCTCTGTTGCTGGATTGATCCTGATCGTCGCCATTTCCGTTGTCTTAATATTTAGAAAGAGAAAGCATGCAAATTCAATGGAGAGAGTAGAGAGTCTTCCTTTGCGAGAACGAGACGAGGATGGAATTTTCACATCTGAGACGCTGCAATTTGAGTTTGCTGTTATTAAGGCAGCAACAGATGATTTTTCTGTTGCAAACAAGCTTGGACAAGGTGGGTTCGGACCCGTTTATAAGGGTAAGCTATCTAACGGAGAAAGCATTGCCGTGAAGAGGCTTTCGAGGAACTCAGGCCAGGGAGACCTTGAATTTAAAAATGAAGTTGTCTTGGTCGGTAAGCTTCAACACCGGAACTTAGTCAGGCTCTTAGGATTCAGCTTGCAAGGAAATGAGAGGCTTCTTGTTTATGAATTTGTGCCCAATGCAAGCCTTGATCAATTTATATTTGATCCACAAAGACGGACAAATTTAGAGTGGGACAGGAGATTCAAAATCATAGGTGGCATTGCTCGAGGACTACTTTATCTTCATGAAGACTCTCGACTTAGAATTATTCATCGTGATCTCAAAGCCAGCAACATTCTGTTAGATGCAGAAATGAATGCCAAAATAGCAGATTTTGGAATGGCAAAACTGTTTGAACTGGACGAGACGCAAGGGAACACTAGCAGGGTAGTGGGTACATATGGTTATATGTCACCAGAGTATGTCCTCCACGGACAGTTTTCAGTAAAATCTGATGTGTACAGCTTTGGCGTAATAATTCTTGAGATAGTTAGCGGCCAAAAGAACAATTGCTTCCGCAACGGAGAAAGAGTGGAAGACCTCTTGAGTTTTGTTTGGAATAGCTGGAGAGAAGGAAGAGGTTCAAACGTAATTGACCCAACACTGACTTCAGGTTCCAAAAATGAAATGATGAGATGCATTCACATCGGGCTGTTGTGCGTTCAAGAAGACCCGGCCCGAAGACCGACAATGGCGTCCGTAGTTCTAATGCTCAACAGCTTTTCTCTCTCCCTCCCCGTCCCAGCCGGACCTGCATTTTATACGAGCAGCACCGTCGTCGAAGCAGAGAAGACAGAGCCAGCAGGTTCCGAGAGGAACTCCCTCGGCCATTCAAATGAATCTACCATCACTAACAGTGACCTCTATCCTCGCTAG 2001 45.78 MAVTRLLILFFFFFFFFFSTPLSAQPDFRYHVCNEGNGNYTANDSYSANLHDLLSSILTLDYVYYGFFNFSLGQNSNAANAIGLCRGDIDSAACRSCLNDSRILLPRLCPNRKEAIGWYNTCMLKYSNRSIFGLMETDPAPIIWTTANVSDWDQYYRDLRTLLDDLKGKAAGGSSLLKYEAGSASTSNFRTLYALLQCTPDLSEQECDDCLTTSIRKIPSCCSGSVIVSAPSCYLRYEEYRFYQPSLPQSPPPLLSPPPARVGEEGEQSNRARTIIIIVVTSVAGLILIVAISVVLIFRKRKHANSMERVESLPLRERDEDGIFTSETLQFEFAVIKAATDDFSVANKLGQGGFGPVYKGKLSNGESIAVKRLSRNSGQGDLEFKNEVVLVGKLQHRNLVRLLGFSLQGNERLLVYEFVPNASLDQFIFDPQRRTNLEWDRRFKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMNAKIADFGMAKLFELDETQGNTSRVVGTYGYMSPEYVLHGQFSVKSDVYSFGVIILEIVSGQKNNCFRNGERVEDLLSFVWNSWREGRGSNVIDPTLTSGSKNEMMRCIHIGLLCVQEDPARRPTMASVVLMLNSFSLSLPVPAGPAFYTSSTVVEAEKTEPAGSERNSLGHSNESTITNSDLYPR 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3753381 3756223 + Bma005812.1 Bma11g00351 90753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00351 666 MobiDBLite consensus disorder prediction 646 666 - -
Bma11g00351 666 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00351 666 Gene3D - 25 130 IPR038408 -
Bma11g00351 666 Gene3D - 140 242 IPR038408 -
Bma11g00351 666 Pfam Salt stress response/antifungal 149 240 IPR002902 -
Bma11g00351 666 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Bma11g00351 666 SMART serkin_6 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00351 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Bma11g00351 666 SUPERFAMILY Protein kinase-like (PK-like) 323 613 IPR011009 -
Bma11g00351 666 Pfam Protein tyrosine and serine/threonine kinase 345 611 IPR001245 GO:0004672|GO:0006468
Bma11g00351 666 Gene3D Phosphorylase Kinase; domain 1 304 418 - -
Bma11g00351 666 MobiDBLite consensus disorder prediction 639 666 - -
Bma11g00351 666 Gene3D Transferase(Phosphotransferase) domain 1 419 620 - -
Bma11g00351 666 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 640 - -
Bma11g00351 666 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 640 - -
Bma11g00351 666 ProSiteProfiles Gnk2-homologous domain profile. 137 242 IPR002902 -
Bma11g00351 666 CDD STKc_IRAK 349 614 - -
Bma11g00351 666 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00326 Bma-Chr7:4240191 Bma11g00351 Bma-Chr11:3753381 0 dispersed
Bma11g00349 Bma-Chr11:3443747 Bma11g00351 Bma-Chr11:3753381 5.61E-164 dispersed
Bma11g00351 Bma-Chr11:3753381 Bma11g00360 Bma-Chr11:3887402 5.84E-85 proximal
Bma11g00350 Bma-Chr11:3659451 Bma11g00351 Bma-Chr11:3753381 0 tandem
Bma11g00351 Bma-Chr11:3753381 Bma11g00352 Bma-Chr11:3756533 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66775 PF07714 PK_Tyr_Ser-Thr 6.10E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00351 - - vvi:100246759 753.821