Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00352 ATGGCGTGTGAAGACTTTCTAGACTTCAATGGAAAGGAGGGCTTAGTCTTATCGTTTAAATTTCAAACATGCTGCACCTACACGGTAAGACTCAGTCCGGCGGAATCTTTTCTCCGTTTTCCTGCAATTCTTATTGGGATTGTGGAAGACGAGCGTCCAGTGTATTGCAGCGTCGTTCGATCGGGAAAGCTTGAGGAAATGGCTGTAACTCGCCTCCTGATTCTCTTCTTCTTCTTCTTCTCAACCCCGCTTAGCGCACAGCCAGGCTTCCGTTACCACGTATGCAGTGACAGCAATGGGAATTACACTGCCAACGACTCCTACGGCGCCAACCTCCACAACCTCCTCTCCTCCATTTTGACACTTGACTACGTCTACTACGGATTTTTCAATTTCTCTCTCGGCCAAAATTCCAACGCCGCCAACGCAATCGGGGTTTGCAGGGGCGACATCGATTCCGCTGCTTGCCGGAGCTGCCTAAACAACTCGAGGATCCTCCTCCCGCGGCTTTGTCCGAATCGGAAGGAGGCTATCGGGTGGTACAATGAGTGCATGTTGAAATACTCCAATCGGAGCATATTTGGATTGATGGAGACGGATCCATATCATATTATATGGACTACAGCAAATGTCTCGGATTGGGATCAGTATTACAGAGATCTTCGGATTTTGTTGGATGATTTGAAAGGTAAAGCTGCGGGCGGTACCTCTCTGTTAAAATATGAGGCAGGAAGTGCCCCGACGTCGAATTTCAGAACTCTCTATGCTCTTCTACAGTGTACACCTGATTTGTCTAAGCAAGAATGCGACGATTGCTTGACTACTTCGATTAGTAGAATTCCATCTTGTTGTTCTGGGAGTGTTATAGTGGGTTCACCTAGTTGTTATTTGAGATACGAAGAGAATCGGTTCTATCAGCCTTCTTTGCCGCAATCCCCGCCGCCTCTGCTATCCCCTCCCCCAGTAAGAGTAGGCGAAGAAGTACTTGCAGGAAAGGAGAATGATACCTCTCGAATTGTCATTGTCATTGTTGTGCCTATTGTTGGTGTGTTGGTTGTAATGTCTTTGATTTGTATCTTCATCTGTTTTAGGAGAAAGAGAAGCAATGAAAGGGCTGGTGATGTAAAGACTGAAGAGTCCTTACAATTCGACTTTGAAACCATTAGAAACGCCACGAATAATTTCTCCGAGGAAAATAAGCTTGGAGAGGGCGGATTTGGAGCTGTTTACAAGGGGAAGCTTTCAGATGGACAAGTCATAGCAGTGAAAAGGCTATCTGGAAATTCTGCACAAGGGGATGTGGAGTTCCGGAATGAAGTCCAGTTAGTCGCTAAGCTACAGCATAGGAATTTAGTAAGGCTTCATGGATTCTGTTTAGATAGAAATGAAAGGGTTCTCGTCTATGAATTTGTCACCAACACCAGCCTTGATCGTTTCATCTTTGATCCAGTCAAACGCCTCAATTTACGATGGCAAAACCGGTACGAAATCATTTCAGGGATAGCTCGTGGACTCCTTTACCTCCACGAAGACTCCCAACTTAGAATTATCCATCGTGATCTGAAAGCTAGTAATGTGCTGCTCGATGCAATGCTCAAACCGAAAATTGCGGATTTCGGCCTGGCAAAGTTGTTTGAATCTGATCAAACTCAAGGCAACACATCCAAGATTGCAGGAACATTCGGATATATGGCTCCAGAGTATGTGCATCTCGGGCAATTTTCAGTCAAATCAGATGTATATAGTTTTGGTGTTATAGTTTTGGAAATTGTGAGTGGCCGAAGTCAGAATAATTTGATATTCGAAAAAGGGGAGAGCACAGAACACCTTCTGGGCTATGCATGGAGAAATTGGAAGGAAGGGAAAATCTCAAATATTATAGACAGTACACTGGAAAGAGGTTGGGTAGATCAAATAATGAGATGCATTCAGATAGGATTGCTTTGTGTTCAAGAAAGGGCAACCAGCAGGCCAACCATGGCTTCTGTGGTTCTCATGCTGAGTAGCTCCTCCCTCACCCTCTCAATCCCATCACGGCCTGCATTTTTACTCCAAAGCAACATTGAACCGAGTGCTTCATCGGAAGTTTCGCTCGTTACACCATCTGGTAAACGGGTTGACATCGAGCCATCAGCAAACGAGGCTTCAATCACTGATTTATATCCTCGATAG 2172 45.17 MACEDFLDFNGKEGLVLSFKFQTCCTYTVRLSPAESFLRFPAILIGIVEDERPVYCSVVRSGKLEEMAVTRLLILFFFFFSTPLSAQPGFRYHVCSDSNGNYTANDSYGANLHNLLSSILTLDYVYYGFFNFSLGQNSNAANAIGVCRGDIDSAACRSCLNNSRILLPRLCPNRKEAIGWYNECMLKYSNRSIFGLMETDPYHIIWTTANVSDWDQYYRDLRILLDDLKGKAAGGTSLLKYEAGSAPTSNFRTLYALLQCTPDLSKQECDDCLTTSISRIPSCCSGSVIVGSPSCYLRYEENRFYQPSLPQSPPPLLSPPPVRVGEEVLAGKENDTSRIVIVIVVPIVGVLVVMSLICIFICFRRKRSNERAGDVKTEESLQFDFETIRNATNNFSEENKLGEGGFGAVYKGKLSDGQVIAVKRLSGNSAQGDVEFRNEVQLVAKLQHRNLVRLHGFCLDRNERVLVYEFVTNTSLDRFIFDPVKRLNLRWQNRYEIISGIARGLLYLHEDSQLRIIHRDLKASNVLLDAMLKPKIADFGLAKLFESDQTQGNTSKIAGTFGYMAPEYVHLGQFSVKSDVYSFGVIVLEIVSGRSQNNLIFEKGESTEHLLGYAWRNWKEGKISNIIDSTLERGWVDQIMRCIQIGLLCVQERATSRPTMASVVLMLSSSSLTLSIPSRPAFLLQSNIEPSASSEVSLVTPSGKRVDIEPSANEASITDLYPR 723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3756533 3759311 + Bma005813.1 Bma11g00352 90754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00352 723 Gene3D Phosphorylase Kinase; domain 1 359 470 - -
Bma11g00352 723 ProSiteProfiles Gnk2-homologous domain profile. 199 304 IPR002902 -
Bma11g00352 723 ProSiteProfiles Protein kinase domain profile. 395 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00352 723 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524
Bma11g00352 723 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 74 697 - -
Bma11g00352 723 ProSiteProfiles Gnk2-homologous domain profile. 90 193 IPR002902 -
Bma11g00352 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Bma11g00352 723 SMART serkin_6 395 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00352 723 CDD STKc_IRAK 401 660 - -
Bma11g00352 723 Pfam Salt stress response/antifungal 211 301 IPR002902 -
Bma11g00352 723 Pfam Salt stress response/antifungal 95 190 IPR002902 -
Bma11g00352 723 SUPERFAMILY Protein kinase-like (PK-like) 379 667 IPR011009 -
Bma11g00352 723 Gene3D - 88 192 IPR038408 -
Bma11g00352 723 Gene3D - 200 304 IPR038408 -
Bma11g00352 723 Gene3D Transferase(Phosphotransferase) domain 1 471 675 - -
Bma11g00352 723 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 74 697 - -
Bma11g00352 723 Pfam Protein kinase domain 396 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00877 Bma-Chr3:8527076 Bma11g00352 Bma-Chr11:3756533 1.47E-59 dispersed
Bma07g00324 Bma-Chr7:4145649 Bma11g00352 Bma-Chr11:3756533 0 dispersed
Bma11g00350 Bma-Chr11:3659451 Bma11g00352 Bma-Chr11:3756533 0 dispersed
Bma11g00352 Bma-Chr11:3756533 Bma15g00789 Bma-Chr15:16806892 6.36E-116 dispersed
Bma11g00351 Bma-Chr11:3753381 Bma11g00352 Bma-Chr11:3756533 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66776 PF00069 Pkinase 3.80E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00352 - - gmx:102662291 691.419