Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00359 | ATGGCGATTCAGGTGCCTCATGATTTCAAGTGTCCGATTTCGCTGGAGATAATGACCGACCCGGTTATACTTTCATCGGGTCATACCTTTGATCGAGCCTCAATCCAACGGTGGCTCGATGCCGGCCACCGGAATTGCCCAATTACTCTTCTTCCCCTTCCTGAATATCCTTTACTCATTCCTAATCACGCTCTCAGAAGCTTAATTTCTAACTATACCCTCCTCGCACCGCCCAAACCACCATCTCTTCCGGAGCCCCAATCCCTAATCTCTGCCCTAACTGCCCCGTCTTCTTCGCTGCAATCGAAACTCGATTCGCTTAACGAACTGGCTCGATTGTCGAAGCGCGACTCGGGGTTTCGTAAAAAGTTGACCGAGTCTGGTGTCGTCTCTCCAGTTCTTAAATGTGCTGGGTCCGGCGACTTAGGTCTTCAAGAGAAAGCGCTTGCTTTATTGCTGAATCTTAGTTTAGACGACGATAACAAAGTTGGTTTGGTTGCGGAAGGTGCAATTGTGTTTATCGTGGCTTCTCTACGCTGTAGCTCGTCGGATTGTCGAGCGTTGGCGGCGACGATACTGACAAGCTTGGCAGTTGTGGAGGTAAACAAAGTCACAATTGGAGAATACCCGCATGCAGTTCAAGCGTTAGTTTCGCTTCTGCGAGATGGAAGAAGCCGAGAGAAGAAAGAAGCGGCTACGGCACTTTATGCCATATGTTCATTCCCGGCAAATCGGCGGCGAGCGGTGGGATGTGGGGCTGTCCCGATTCTGATCCATATCGCGGACTCTGGCCTTGAAAGGGCTATTGAAGTTCTGGGACTTCTGGCAAAATGCAAGGAAGGTCGAGAAGAGATGCAAAGATCAGAGGGATGTTTGCAGATATTCGTTCGTGTATTGAGGAACGGAAGCTCAAGGGGAGTTCAATACGCTCTTCTAACTCTCAGTTCTATCTGTTGCTACTCTGATCAAATGTGTTTAGAAGCTAGTAGAGAAGGCGCTTTGGATGTGGCCATGGCTTTAGTTGAAGATGACAATGTAAAGATTAGGAAAAATGCTTCAAATTTGGTCCGGGTTCTGCGTGGTAATGATTTTTCCAGGTGA | 1101 | 48.41 | MAIQVPHDFKCPISLEIMTDPVILSSGHTFDRASIQRWLDAGHRNCPITLLPLPEYPLLIPNHALRSLISNYTLLAPPKPPSLPEPQSLISALTAPSSSLQSKLDSLNELARLSKRDSGFRKKLTESGVVSPVLKCAGSGDLGLQEKALALLLNLSLDDDNKVGLVAEGAIVFIVASLRCSSSDCRALAATILTSLAVVEVNKVTIGEYPHAVQALVSLLRDGRSREKKEAATALYAICSFPANRRRAVGCGAVPILIHIADSGLERAIEVLGLLAKCKEGREEMQRSEGCLQIFVRVLRNGSSRGVQYALLTLSSICCYSDQMCLEASREGALDVAMALVEDDNVKIRKNASNLVRVLRGNDFSR | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3882473 | 3883573 | - | Bma005820.1 | Bma11g00359 | 90761 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00359 | 366 | ProSiteProfiles | U-box domain profile. | 4 | 79 | IPR003613 | GO:0004842|GO:0016567 | |
Bma11g00359 | 366 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 8 | 1 | 360 | - | - | |
Bma11g00359 | 366 | SMART | Ubox_2 | 8 | 72 | IPR003613 | GO:0004842|GO:0016567 | |
Bma11g00359 | 366 | SUPERFAMILY | RING/U-box | 3 | 73 | - | - | |
Bma11g00359 | 366 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 76 | IPR013083 | - | |
Bma11g00359 | 366 | Gene3D | - | 208 | 359 | IPR011989 | - | |
Bma11g00359 | 366 | SMART | arm_5 | 321 | 361 | IPR000225 | GO:0005515 | |
Bma11g00359 | 366 | SMART | arm_5 | 158 | 198 | IPR000225 | GO:0005515 | |
Bma11g00359 | 366 | SMART | arm_5 | 278 | 319 | IPR000225 | GO:0005515 | |
Bma11g00359 | 366 | SMART | arm_5 | 202 | 240 | IPR000225 | GO:0005515 | |
Bma11g00359 | 366 | SMART | arm_5 | 117 | 157 | IPR000225 | GO:0005515 | |
Bma11g00359 | 366 | Pfam | U-box domain | 5 | 72 | IPR003613 | GO:0004842|GO:0016567 | |
Bma11g00359 | 366 | PANTHER | U BOX DOMAIN-CONTAINING | 1 | 360 | - | - | |
Bma11g00359 | 366 | Gene3D | - | 84 | 207 | IPR011989 | - | |
Bma11g00359 | 366 | CDD | RING-Ubox_PUB | 9 | 49 | IPR045210 | - | |
Bma11g00359 | 366 | SUPERFAMILY | ARM repeat | 88 | 359 | IPR016024 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma11g00359 | Bma-Chr11:3882473 | Bma11g00122 | Bma-Chr11:1154400 | 1.15E-56 | dispersed | |
Bma11g00359 | Bma-Chr11:3882473 | Bma07g00336 | Bma-Chr7:4319911 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00359 | - | - | zju:107421885 | 518.85 |