Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00360 ATGAAAGCGCTCGTCAATGCTGCAACCGGAGAGAATCGACTTTTCACTTCATGGAAATCCGAAAGCGATCCATCCGTCGGAAACTATACTTTAGGCGTTGATCCTCGAGGATCCCCTCAGATTGTGATTTGGGAGGGACGAACTAGACGGTGGAGAAGCGGCCATTGGGATTCACAGAAATTTAATGGCGTTCCCAACATGAGTGCGAGCTTGTTGTATGGATTTGCACTGTCCCAACCTGATACAGAAGGAAATAGGTATTTCACTTACACACCACTGAACAGTTCGGATTATTTAAGGTTTAAGATACAGTGGAATGGACAAGAAGAGCAGCTGAGGTGGGAACAAAATCTGCAGCAATGGACTGTCATGCAAGAACAGCCTGCTAGTGAATGCGAGCTCTACAACCGGTGCGGGAATTTTGCTGTCTGCACTGAATCCAATTCGCCGAAATGCACTTGTATCGATGGGTTTGTACCTAAGAACTCGGATCACTGGAGCAATGGCAACTGGTCTGGTGGGTGTGTGAGGAGGACTCCATTGCTATGCCAGAGGAGTAGTAGTAACGGAACAGAGCAAGATAATCAAGAAGATGGGTTTTTCACTATGAATGGCTTGAAATTGCCTGATTTTGTGGATTTGGTGGTTGTGGGTTATATGGAAACTTGCAGAGTCAAATGCTTGGCCAATTGTTCTTGTACTGCATATGCTGAAGTTTCGGGGATCGGGTGCATGATTTGGAGCGGGGACTTGATCGATATGCAGCATTTTAACGACGCCGGGAGCAGTCTTAACATTCGTCTTGCCCATTCTGAATTAGGAAATGAGAAGAAACGATCAACCTCCGTTGTCGTTATAGCGGTCTCCATAGCTGGAGCAGTCTTCCTAGCTATAGTCATTGGGTTATTGTGGAGATACAGGGAAAAACTGAAAGGTTACAAGAGCAGAGATTTTTCGAAGGAGTTTTCAGGACCGTCTGATTTTGGCATCGATGGGGACGAAACAAACGGACCAGAACTGCAATTTTATACTTTCAATTCTGTAGCGGCCGCTACAGACAATTTTTCTGATAAAAGCAAGCTCGGACAGGGAGGGTTCGGTCCGGTATATAAGGGGATGCTTCCAGGAAGGAAGGAAATTGCAGTGAAGAGACTCTCAGTAAGATCTGGGCAAGGCCTTGAAGAGTTTAAGAATGAAATTACTCTTATTGCCAAGTTACAACATAGAAATCTTGTTAGACTTTTAGGTTACTGTGTTCAAGGGGAAGAAAAGATGCTGCTTTATGAATACATGCCCAATAAAACAGATTCATCGCAGCAGGCACTACTGGATTGGTCAACCCGTTTCAAAATCATCGAAGGGATTGCCCGGGGGCTCCTTTACCTCCATCGCGATTCGAGGCTTAGAATAATTCATAGAGATCTAAAGGCAAGTAACATCTTGTTGGATGAAGACATGAATCCTAAGATATCGGACTTTGGAATGGCGAGAATTTTTGGGGCAAACGAAGACGAAGCAAATACGAATCGCGTTGTGGGCACTTATGGCTATATGGCTCCTGAATATGCAATGGAAGGTCTATTTTCGGTGAAATCAGACGTTTATAGCTTTGGCGTTTTGTTACTTGAAATCGTATGCGGCCGGAGGAACACTAGCTTTCGGACATCCGATCAGTCAAGCCTTATCGGCCACGCTTGGCATCTATGGAACGAGAGAAAATCGATGGATCTTCTAGATTTTTCTATTCGGGAAGCGAGTTCGAGTTCGAGCGATGAAGTTTTGAGATGCATACACGTGGGAATGTTGTGCGTACAAGACTCCCCGCTCTTGAGACCGACAATGTCCTCCGTTGTGTTGATGTTAGAGAGTGAATCCACTTCTCGACCTCTGCCTAGACAACCCACTTATACTTCCATGAGAAACTCGGTCGATATAGAACATTTTATGGACGGAATTGAAATTGTATCGTCAAATGATATGACGGCAACAATGGTCGTCGGGAGATACTTTGATAAATCATCGGACTATCGCCATTTCTTTTTACCTACCTTTTTTCTTCCTCTTCTTCTTCTTCTCCCTTTGATTGCACTCTCTCTTGATACCTTGACTGCATTGGAATCGCTCCAGTTCAACCAGACGATCGTCTCCTCCGCCGACGTTTTCGAGCTCGGGTTTTTTCAACCTGGAAATTCCGGCTGGTATTTGGGACTTTGGTATAAGGATATTCCGGCTCGGACTATCGTCTGGGTTGCTAATAACGACAGTCCTCTCTCGGATTCTTTAGGAGTTTTGAAAGTTACTACGATTAATGAGGCTAGGAAAAGTTTTTCAAAACTGATTCTAATCTCTGACCGTGCAGAGGATGACGGCGATGGGGTGGTTCAAGGTAGGTTGGTTGAAGGTCAAGAAATAGCAGTGAAGAGGCTGTCGAAGACGTCATTTCAAGGAATGGAAGAGTTCAAGAACGAGATGAAGTTGATAGCCAGGCTTCAACACAGAAATCTGCTTCATCTTTTTTCTGCAGATAAGGCGAAGAAGCCATTGCTGGACTGGCCTAAACGTTTCAATATAATATGTGGGATAGCTAGAGGCCTTATTTATCTTCACCAAGATTCCAGGTTTAGAATCATCCACAGAGATCTCAAGGCAAGTAACATTCTTCTCGACGGGGAAATGAATCCCAAAATTTCAGATTTCGGAATGGCGAGAATTTTCGGAACTGATCAAACCGAAGCAAATACTAGGAAAGTTGTCGGAACATACGGGTACATGTCGCCGGAATATGCCATGGACGGCCTCTTCTCGGTGAAATCCGACGTCTTCAGCTTTGGAGTTTTGGTTTTGGAAATCATTGCCGGTAACAAGAATAGGGGATTTTACTATGCAAATAATGAGCTAAACCTTCTAGGATATGCTTGGAAACTATGGAAAGAAAATAAGGTTTTGGAGGTGACAGATCCAACCATAGGTGATTCATATTCACCAACGGAAGTTCTGAGATGTATACAAGTAGGTCTTTTATGCGTTCAAGAACGGACCGAAGATCGGCCAACCATGGCTTCCGTCGTCCTAATGCTTAGCAGCGATACGGCCACAATGCCGCAGCCCAAAAGCCCGGGATACTGCGTCAGAAGAAACGACACCGACTCGTCAACGAGTAGGGTAGATGAATCATGCACTGTAAACCAAGTTACAGTCACAATACTTGAAGCTAGGTAG 3219 44.61 MKALVNAATGENRLFTSWKSESDPSVGNYTLGVDPRGSPQIVIWEGRTRRWRSGHWDSQKFNGVPNMSASLLYGFALSQPDTEGNRYFTYTPLNSSDYLRFKIQWNGQEEQLRWEQNLQQWTVMQEQPASECELYNRCGNFAVCTESNSPKCTCIDGFVPKNSDHWSNGNWSGGCVRRTPLLCQRSSSNGTEQDNQEDGFFTMNGLKLPDFVDLVVVGYMETCRVKCLANCSCTAYAEVSGIGCMIWSGDLIDMQHFNDAGSSLNIRLAHSELGNEKKRSTSVVVIAVSIAGAVFLAIVIGLLWRYREKLKGYKSRDFSKEFSGPSDFGIDGDETNGPELQFYTFNSVAAATDNFSDKSKLGQGGFGPVYKGMLPGRKEIAVKRLSVRSGQGLEEFKNEITLIAKLQHRNLVRLLGYCVQGEEKMLLYEYMPNKTDSSQQALLDWSTRFKIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGMARIFGANEDEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVCGRRNTSFRTSDQSSLIGHAWHLWNERKSMDLLDFSIREASSSSSDEVLRCIHVGMLCVQDSPLLRPTMSSVVLMLESESTSRPLPRQPTYTSMRNSVDIEHFMDGIEIVSSNDMTATMVVGRYFDKSSDYRHFFLPTFFLPLLLLLPLIALSLDTLTALESLQFNQTIVSSADVFELGFFQPGNSGWYLGLWYKDIPARTIVWVANNDSPLSDSLGVLKVTTINEARKSFSKLILISDRAEDDGDGVVQGRLVEGQEIAVKRLSKTSFQGMEEFKNEMKLIARLQHRNLLHLFSADKAKKPLLDWPKRFNIICGIARGLIYLHQDSRFRIIHRDLKASNILLDGEMNPKISDFGMARIFGTDQTEANTRKVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIIAGNKNRGFYYANNELNLLGYAWKLWKENKVLEVTDPTIGDSYSPTEVLRCIQVGLLCVQERTEDRPTMASVVLMLSSDTATMPQPKSPGYCVRRNDTDSSTSRVDESCTVNQVTVTILEAR 1072
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3887402 3894973 - Bma005821.2 Bma11g00360 90762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00360 1072 Pfam Domain of unknown function (DUF3403) 1028 1072 IPR021820 GO:0004674
Bma11g00360 1072 ProSitePatterns Serine/Threonine protein kinases active-site signature. 876 888 IPR008271 GO:0004672|GO:0006468
Bma11g00360 1072 SMART blect_4 705 820 IPR001480 -
Bma11g00360 1072 Pfam S-locus glycoprotein domain 51 162 IPR000858 GO:0048544
Bma11g00360 1072 Pfam Protein tyrosine and serine/threonine kinase 846 1024 IPR001245 GO:0004672|GO:0006468
Bma11g00360 1072 ProSiteProfiles Protein kinase domain profile. 355 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00360 1072 Gene3D Transferase(Phosphotransferase) domain 1 838 1030 - -
Bma11g00360 1072 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 688 767 - -
Bma11g00360 1072 Gene3D Transferase(Phosphotransferase) domain 1 789 837 - -
Bma11g00360 1072 MobiDBLite consensus disorder prediction 1035 1056 - -
Bma11g00360 1072 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 665 - -
Bma11g00360 1072 Gene3D Phosphorylase Kinase; domain 1 332 428 - -
Bma11g00360 1072 SUPERFAMILY Protein kinase-like (PK-like) 340 645 IPR011009 -
Bma11g00360 1072 ProSiteProfiles EGF-like domain profile. 128 164 IPR000742 -
Bma11g00360 1072 SMART ntp_6 195 268 IPR003609 -
Bma11g00360 1072 SMART serkin_6 355 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00360 1072 SMART serkin_6 793 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00360 1072 Gene3D - 695 772 IPR036426 -
Bma11g00360 1072 Gene3D Transferase(Phosphotransferase) domain 1 429 635 - -
Bma11g00360 1072 PANTHER - 688 767 - -
Bma11g00360 1072 PANTHER - 792 1071 - -
Bma11g00360 1072 ProSiteProfiles PAN/Apple domain profile. 183 269 IPR003609 -
Bma11g00360 1072 PANTHER - 1 665 - -
Bma11g00360 1072 Pfam PAN-like domain 195 254 IPR003609 -
Bma11g00360 1072 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 792 1071 - -
Bma11g00360 1072 CDD STKc_IRAK 361 622 - -
Bma11g00360 1072 CDD PAN_AP_plant 179 269 - -
Bma11g00360 1072 Pfam Protein kinase domain 356 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00360 1072 SUPERFAMILY Protein kinase-like (PK-like) 793 1026 IPR011009 -
Bma11g00360 1072 ProSiteProfiles Protein kinase domain profile. 755 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00360 1072 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00602 Bma-Chr8:37989724 Bma11g00360 Bma-Chr11:3887402 3.40E-30 dispersed
Bma11g00360 Bma-Chr11:3887402 Bma14g01027 Bma-Chr14:12023252 7.31E-08 dispersed
Bma14g01028 Bma-Chr14:12065375 Bma11g00360 Bma-Chr11:3887402 4.17E-46 dispersed
Bma11g00351 Bma-Chr11:3753381 Bma11g00360 Bma-Chr11:3887402 5.84E-85 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66777 PF00069 Pkinase 2.10E-44 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00360 - - pdul:117624173 900.582