Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00421 ATGGAGTCTCGCGTGCTTTCACGCGCAACCGCATTCGCCGGAATTCCGCGTCTCCCGAAGCTGCCGAGGGAGAGTAACAATCACTTGTGCTTCGTCTCAAGCAGGCCGATTGGTGACGGGGGGAACCTATTATGGGGGAGACAACTCCGTCCGGCGCTACTGATCGAGCATTCTCCTGTGGGAATCGTTGGATTAGATAAGAGAGAGATTCTTCGGCCATGCCTCGCTGCTGCCTCTTCACCCGCTGGAGGGAGTGATTCCGCCGGGGAAGGGAAAGTTGCTCCTGTGGGATTCTTCAGCAAGTATCCGGCGCTCGTTACCGGCTTCTTTTTCTTCATGTGGTATTTTCTGAACGTCATATTCAACATCATTAACAAGAAGATCTATAATTACTTCCCGTATCCTTATTTTGTGTCGGTTGTTCATTTATTGGTTGGAGTGGTCTACTGTCTGTTAAGCTGGACTGTTGGCCTTCCTAAGCGTGCTCCCATGGACTCAAACCTCTTGAAGCTTCTCATCCCTGTAGCTTTCTGTCATGCGCTTGGCCATGTGACAAGCAATGTCTCATTTGCTGCTGTTGCTGTCTCATTCACTCATACTATAAAAGCTCTTGAACCTTTCTTCAACGCTGCTGCTTCTCAGTTCATACTTGGACAGGCCATACCTTTAACTCTATGGCTTTCACTGGCCCCTGTTGTTATTGGTGTCTCAATGGCATCATTGACTGAGCTATCATTCAATTGGCTTGGTTTCACTAGTGCTATGATTTCCAACATCTCTTTTACGTACAGGAGTATCTACTCAAAGAAAGCGATGACGGATATGGATAGCACAAATGTCTATGCTTACATTTCCATAATTGCACTGCTTTTCTGTATACCCCCTGCTGCCATCATAGAGGGTCCTCAACTGATCAAGTATGGCTTTAACGATGCAATTGCTAAAGTTGGTCTCACGAAGTTTCTCACTGATCTCTTCTGGGTAGGAATGTTTTATCATCTCTACAATCAGTTGGCCATCAACACTTTGGAGAGGGTGGCACCTCTTACTCATGCTGTTGGCAACGTGTTGAAACGTGTATTTGTGATTGGTTTCTCCATCATTGCCTTCGGTAACAAAATTTCAACTCAAACTGGAATAGGAACGGGCATTGCAATTGCCGGTGTGGCACTTTACTCCTTCATCAAAGCCAAGATGGAAGAAGAGAAACGAGTGAGTTAA 1221 46.27 MESRVLSRATAFAGIPRLPKLPRESNNHLCFVSSRPIGDGGNLLWGRQLRPALLIEHSPVGIVGLDKREILRPCLAAASSPAGGSDSAGEGKVAPVGFFSKYPALVTGFFFFMWYFLNVIFNIINKKIYNYFPYPYFVSVVHLLVGVVYCLLSWTVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQAIPLTLWLSLAPVVIGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAAIIEGPQLIKYGFNDAIAKVGLTKFLTDLFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTGIGTGIAIAGVALYSFIKAKMEEEKRVS 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4548547 4556931 - Bma005879.1 Bma11g00421 90823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00421 406 Pfam Triose-phosphate Transporter family 106 393 IPR004853 -
Bma11g00421 406 PANTHER SOLUTE CARRIER FAMILY 35 37 400 - -
Bma11g00421 406 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 105 403 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bma11g00421 406 PANTHER BNAC02G47130D PROTEIN 37 400 - -
Bma11g00421 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 242 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00393 Bma11g00421 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01308 Bma-Chr7:48655318 Bma11g00421 Bma-Chr11:4548547 2.42E-74 dispersed
Bma11g00421 Bma-Chr11:4548547 Bma14g00350 Bma-Chr14:4300358 2.45E-68 dispersed
Bma14g00532 Bma-Chr14:5839506 Bma11g00421 Bma-Chr11:4548547 2.37E-15 dispersed
Bma11g00421 Bma-Chr11:4548547 Bma07g00393 Bma-Chr7:4800806 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00421 K15283 - twl:120005115 645.58