Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00426 | ATGGGTGGTCTGATCGATTTGAACACGACGGAGGACGACGAGACTCCGTCTTTTGCCGGTTCCTCTGATTCGTCTTCATCTCCTTCTAGTTCTACTTCACCGGTTCCATTTTGCTGGGAGCTATGGCACGCCTGCGTTGGTCCTCTGATTTCTTTGCCGAAGAAAGGTAGTGTAGTCGTCTATTTACCGCAAGCTCACTTGGAGATAGCCAGAGATTTTCCCGCCGGAACCTATGATCTTCCTTCTCACCTCTTCTGTCGCGTTGTTGACGTTCAGCTCCAAGCAGAGGCAGGAACTGATGAGGTTTCCGCTCGGATTTCTCTGGTTCCAGAAAGTCAGAATTTTGAGCAGAAGCTGCAAGAAGGGGAAATCAATGCAGATAATGTCGGAGACGATTTCGAAGCAGCAGTGAAGTCAACTACACCTCCTATGTTCTGCAAGACTCTAACTGCTTCGGATACTACACCTCATATGTTCTGCAAGACTCTAACTGCTTCGGATACTAGCACTCACGGTGGCTTCTCCGTCCCCCGTCGAGCTGCCGAAGATTGCTTCCCTCCGTTGGATTATAATCAGGAGAGGCCTTCACAAGAGCTTTCGGCAAAGGATCTTCACGGGTTGGAATGGAGGTTTCGACACATCTACAGAGCAGGCCAGCCTAGAAGACATCTGCTCACAACCGGATGGAGTGCGTTTGTAAATAAGAAAAAGCTGACCTCAGGGGATGCAGTACTATTCCTTAGGGGCGAGGATGGTGATTTGAGACTCGGAATAAGAAGGGCGGCACAGGTCAAAGGTGGGTCTGCCACTCCTGGTTTGTGCAGCCAGCAGCCTAGCCTTTGCAATCTTAGGAATGTGATTGATTCTATATCGACGAGAAGTGCATTCATTGTTCATTGCAATCCGAGTAGGACCTCGGCCGAGTTCATTATACCTCTTCCTAAATTCTTGAAGAGCGTAAACCAATCTTTTCCGATCGGAATGAGGTTTAAGATGCGTTTTGAAACGGAGGACGCAGCTGAACGAAGACACACAGGCCAGATAGCTGCAATTAGCGATGTGGATCCAATTAGGTGGCCAGGTTCTAAGTGGAGATGTTTAGTGGTGAGGTGGGACGAAGCCGAAAAGAGTAGGCATGGCCGGGTTTCTCCGTGGGAGATCGAGCCATCTGGTTCTCCTCCTGGATCGAATGGCGTGGGTTTTCCGGGTTTGAAGAGGACAAGGATTAAGTTGTCTTCTGATAAACCAGATTTCCCAATCCCTAGCGCAATTGGGCAATCGGACTTTGAGGAATCTCTAAGATTCCCGATGGTCTTGCAAGGTCAAGAAATTTTGGGTTTTGATGCTTCATTAGATGGTTATGGAAATAAAAATCGACTACCATCTGCAAGAAGGGTGTTTTCATGCATGAATTCTGATGTTCCTTCTCAAAGCTTAGGCGCTAGCGGTAAGTCTTGCAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATATTTCCGAGCCTTCCGTACAGAAGAACGGCATGGACTCTTAACAAGGCTCGAGAAAATGGCGAAGGCCGTGTAATCTTCGATGGATTTCAAGTTCCCAAAGCTAAAAATGGTTGGCCTCTCTCGATGCATAGTTCAAATTCGCACGACAAAATATCCTCTGCAACTGCCCAGGCGTCATCCCCATCTTCTGTGTTAACATTTCAGCAGGCTATCAATGTAACTTCAAACTCCAGTTCAGTCTACAGCAGTGGAAAAAGATGTCACTTTGCTGATGGATTAAGAAACGAAATGCTGTCAAATGAGGATAATCAGTCGGGTGGATCAAGTTTCATCGGAAATCCGGTTCCGATGTGCAAAACTAATTGCAGACTATTCGGTTTTTCGCTGATAGAAGAAAATCAAGCCCCCCAGCTGGAGAAAGCTTTTCCGGTTTCATCTGCAACTCCTTACCTGTCCAACGCCGGAGGGCAGTGTCATCCAAAACCTACATTGATGAACAAAGGGGTTGGAAACAAAGTAAGCAATGGATTAGCAATATAA | 2031 | 47.07 | MGGLIDLNTTEDDETPSFAGSSDSSSSPSSSTSPVPFCWELWHACVGPLISLPKKGSVVVYLPQAHLEIARDFPAGTYDLPSHLFCRVVDVQLQAEAGTDEVSARISLVPESQNFEQKLQEGEINADNVGDDFEAAVKSTTPPMFCKTLTASDTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQERPSQELSAKDLHGLEWRFRHIYRAGQPRRHLLTTGWSAFVNKKKLTSGDAVLFLRGEDGDLRLGIRRAAQVKGGSATPGLCSQQPSLCNLRNVIDSISTRSAFIVHCNPSRTSAEFIIPLPKFLKSVNQSFPIGMRFKMRFETEDAAERRHTGQIAAISDVDPIRWPGSKWRCLVVRWDEAEKSRHGRVSPWEIEPSGSPPGSNGVGFPGLKRTRIKLSSDKPDFPIPSAIGQSDFEESLRFPMVLQGQEILGFDASLDGYGNKNRLPSARRVFSCMNSDVPSQSLGASGKSCRFQKVLQGQEIFPSLPYRRTAWTLNKARENGEGRVIFDGFQVPKAKNGWPLSMHSSNSHDKISSATAQASSPSSVLTFQQAINVTSNSSSVYSSGKRCHFADGLRNEMLSNEDNQSGGSSFIGNPVPMCKTNCRLFGFSLIEENQAPQLEKAFPVSSATPYLSNAGGQCHPKPTLMNKGVGNKVSNGLAI | 676 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4591491 | 4594672 | - | Bma005883.1 | Bma11g00426 | 90828 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00426 | 676 | PANTHER | AUXIN RESPONSE FACTOR 3 | 29 | 154 | - | - | |
Bma11g00426 | 676 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Bma11g00426 | 676 | Gene3D | - | 156 | 262 | IPR015300 | - | |
Bma11g00426 | 676 | Pfam | Auxin response factor | 288 | 367 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Bma11g00426 | 676 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 29 | 154 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bma11g00426 | 676 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 154 | 670 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bma11g00426 | 676 | MobiDBLite | consensus disorder prediction | 10 | 30 | - | - | |
Bma11g00426 | 676 | ProSiteProfiles | B3 DNA-binding domain profile. | 159 | 262 | IPR003340 | GO:0003677 | |
Bma11g00426 | 676 | SUPERFAMILY | DNA-binding pseudobarrel domain | 151 | 266 | IPR015300 | - | |
Bma11g00426 | 676 | CDD | B3_DNA | 157 | 260 | IPR003340 | GO:0003677 | |
Bma11g00426 | 676 | Gene3D | - | 323 | 394 | - | - | |
Bma11g00426 | 676 | SMART | B3_2 | 159 | 262 | IPR003340 | GO:0003677 | |
Bma11g00426 | 676 | PANTHER | AUXIN RESPONSE FACTOR 3 | 154 | 670 | - | - | |
Bma11g00426 | 676 | MobiDBLite | consensus disorder prediction | 382 | 402 | - | - | |
Bma11g00426 | 676 | Pfam | B3 DNA binding domain | 159 | 261 | IPR003340 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma11g00426 | Bma14g01118 | CCT | |
Bma07g00399 | Bma11g00426 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00402 | Bma-Chr7:4917151 | Bma11g00426 | Bma-Chr11:4591491 | 0 | dispersed | |
Bma11g00426 | Bma-Chr11:4591491 | Bma14g01118 | Bma-Chr14:14107748 | 4.00E-95 | dispersed | |
Bma07g00137 | Bma-Chr7:2055171 | Bma11g00426 | Bma-Chr11:4591491 | 1.22E-92 | transposed | |
Bma09g00713 | Bma-Chr9:45190259 | Bma11g00426 | Bma-Chr11:4591491 | 6.14E-25 | transposed | |
Bma11g00426 | Bma-Chr11:4591491 | Bma07g00399 | Bma-Chr7:4889574 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58038 | PF02362 | B3 | 1.70E-20 | CL0405 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00426 | K14486 | - | zju:107412017 | 709.909 |