Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00426 ATGGGTGGTCTGATCGATTTGAACACGACGGAGGACGACGAGACTCCGTCTTTTGCCGGTTCCTCTGATTCGTCTTCATCTCCTTCTAGTTCTACTTCACCGGTTCCATTTTGCTGGGAGCTATGGCACGCCTGCGTTGGTCCTCTGATTTCTTTGCCGAAGAAAGGTAGTGTAGTCGTCTATTTACCGCAAGCTCACTTGGAGATAGCCAGAGATTTTCCCGCCGGAACCTATGATCTTCCTTCTCACCTCTTCTGTCGCGTTGTTGACGTTCAGCTCCAAGCAGAGGCAGGAACTGATGAGGTTTCCGCTCGGATTTCTCTGGTTCCAGAAAGTCAGAATTTTGAGCAGAAGCTGCAAGAAGGGGAAATCAATGCAGATAATGTCGGAGACGATTTCGAAGCAGCAGTGAAGTCAACTACACCTCCTATGTTCTGCAAGACTCTAACTGCTTCGGATACTACACCTCATATGTTCTGCAAGACTCTAACTGCTTCGGATACTAGCACTCACGGTGGCTTCTCCGTCCCCCGTCGAGCTGCCGAAGATTGCTTCCCTCCGTTGGATTATAATCAGGAGAGGCCTTCACAAGAGCTTTCGGCAAAGGATCTTCACGGGTTGGAATGGAGGTTTCGACACATCTACAGAGCAGGCCAGCCTAGAAGACATCTGCTCACAACCGGATGGAGTGCGTTTGTAAATAAGAAAAAGCTGACCTCAGGGGATGCAGTACTATTCCTTAGGGGCGAGGATGGTGATTTGAGACTCGGAATAAGAAGGGCGGCACAGGTCAAAGGTGGGTCTGCCACTCCTGGTTTGTGCAGCCAGCAGCCTAGCCTTTGCAATCTTAGGAATGTGATTGATTCTATATCGACGAGAAGTGCATTCATTGTTCATTGCAATCCGAGTAGGACCTCGGCCGAGTTCATTATACCTCTTCCTAAATTCTTGAAGAGCGTAAACCAATCTTTTCCGATCGGAATGAGGTTTAAGATGCGTTTTGAAACGGAGGACGCAGCTGAACGAAGACACACAGGCCAGATAGCTGCAATTAGCGATGTGGATCCAATTAGGTGGCCAGGTTCTAAGTGGAGATGTTTAGTGGTGAGGTGGGACGAAGCCGAAAAGAGTAGGCATGGCCGGGTTTCTCCGTGGGAGATCGAGCCATCTGGTTCTCCTCCTGGATCGAATGGCGTGGGTTTTCCGGGTTTGAAGAGGACAAGGATTAAGTTGTCTTCTGATAAACCAGATTTCCCAATCCCTAGCGCAATTGGGCAATCGGACTTTGAGGAATCTCTAAGATTCCCGATGGTCTTGCAAGGTCAAGAAATTTTGGGTTTTGATGCTTCATTAGATGGTTATGGAAATAAAAATCGACTACCATCTGCAAGAAGGGTGTTTTCATGCATGAATTCTGATGTTCCTTCTCAAAGCTTAGGCGCTAGCGGTAAGTCTTGCAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATATTTCCGAGCCTTCCGTACAGAAGAACGGCATGGACTCTTAACAAGGCTCGAGAAAATGGCGAAGGCCGTGTAATCTTCGATGGATTTCAAGTTCCCAAAGCTAAAAATGGTTGGCCTCTCTCGATGCATAGTTCAAATTCGCACGACAAAATATCCTCTGCAACTGCCCAGGCGTCATCCCCATCTTCTGTGTTAACATTTCAGCAGGCTATCAATGTAACTTCAAACTCCAGTTCAGTCTACAGCAGTGGAAAAAGATGTCACTTTGCTGATGGATTAAGAAACGAAATGCTGTCAAATGAGGATAATCAGTCGGGTGGATCAAGTTTCATCGGAAATCCGGTTCCGATGTGCAAAACTAATTGCAGACTATTCGGTTTTTCGCTGATAGAAGAAAATCAAGCCCCCCAGCTGGAGAAAGCTTTTCCGGTTTCATCTGCAACTCCTTACCTGTCCAACGCCGGAGGGCAGTGTCATCCAAAACCTACATTGATGAACAAAGGGGTTGGAAACAAAGTAAGCAATGGATTAGCAATATAA 2031 47.07 MGGLIDLNTTEDDETPSFAGSSDSSSSPSSSTSPVPFCWELWHACVGPLISLPKKGSVVVYLPQAHLEIARDFPAGTYDLPSHLFCRVVDVQLQAEAGTDEVSARISLVPESQNFEQKLQEGEINADNVGDDFEAAVKSTTPPMFCKTLTASDTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQERPSQELSAKDLHGLEWRFRHIYRAGQPRRHLLTTGWSAFVNKKKLTSGDAVLFLRGEDGDLRLGIRRAAQVKGGSATPGLCSQQPSLCNLRNVIDSISTRSAFIVHCNPSRTSAEFIIPLPKFLKSVNQSFPIGMRFKMRFETEDAAERRHTGQIAAISDVDPIRWPGSKWRCLVVRWDEAEKSRHGRVSPWEIEPSGSPPGSNGVGFPGLKRTRIKLSSDKPDFPIPSAIGQSDFEESLRFPMVLQGQEILGFDASLDGYGNKNRLPSARRVFSCMNSDVPSQSLGASGKSCRFQKVLQGQEIFPSLPYRRTAWTLNKARENGEGRVIFDGFQVPKAKNGWPLSMHSSNSHDKISSATAQASSPSSVLTFQQAINVTSNSSSVYSSGKRCHFADGLRNEMLSNEDNQSGGSSFIGNPVPMCKTNCRLFGFSLIEENQAPQLEKAFPVSSATPYLSNAGGQCHPKPTLMNKGVGNKVSNGLAI 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4591491 4594672 - Bma005883.1 Bma11g00426 90828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00426 676 PANTHER AUXIN RESPONSE FACTOR 3 29 154 - -
Bma11g00426 676 MobiDBLite consensus disorder prediction 1 30 - -
Bma11g00426 676 Gene3D - 156 262 IPR015300 -
Bma11g00426 676 Pfam Auxin response factor 288 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bma11g00426 676 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 29 154 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bma11g00426 676 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 154 670 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bma11g00426 676 MobiDBLite consensus disorder prediction 10 30 - -
Bma11g00426 676 ProSiteProfiles B3 DNA-binding domain profile. 159 262 IPR003340 GO:0003677
Bma11g00426 676 SUPERFAMILY DNA-binding pseudobarrel domain 151 266 IPR015300 -
Bma11g00426 676 CDD B3_DNA 157 260 IPR003340 GO:0003677
Bma11g00426 676 Gene3D - 323 394 - -
Bma11g00426 676 SMART B3_2 159 262 IPR003340 GO:0003677
Bma11g00426 676 PANTHER AUXIN RESPONSE FACTOR 3 154 670 - -
Bma11g00426 676 MobiDBLite consensus disorder prediction 382 402 - -
Bma11g00426 676 Pfam B3 DNA binding domain 159 261 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00426 Bma14g01118 CCT
Bma07g00399 Bma11g00426 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00402 Bma-Chr7:4917151 Bma11g00426 Bma-Chr11:4591491 0 dispersed
Bma11g00426 Bma-Chr11:4591491 Bma14g01118 Bma-Chr14:14107748 4.00E-95 dispersed
Bma07g00137 Bma-Chr7:2055171 Bma11g00426 Bma-Chr11:4591491 1.22E-92 transposed
Bma09g00713 Bma-Chr9:45190259 Bma11g00426 Bma-Chr11:4591491 6.14E-25 transposed
Bma11g00426 Bma-Chr11:4591491 Bma07g00399 Bma-Chr7:4889574 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58038 PF02362 B3 1.70E-20 CL0405 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00426 K14486 - zju:107412017 709.909