Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00453 ATGGATTCTGCTAGAAGTTGGTTTCAGAAATTTCAACATAGAGACAACAGGGAAACTGAGGATGCGAAAGATGTTGATGAAGCCCCTTCCGGTGCAACAAAGCAGAAAGTTGAGGCTGCAAAGCAATATATTGAGAATCATTATAAATCTCAAATGAAGTCACTGCAAGATAGGAAAGAGAGGCGTTGGGTCATGGAAAGGAGGCTTGCCGATGCTGATGCTTCGGAGGAAGATCAAATGAACGTGTTGAAATATTTAGAGAGACAAGAGACAGAATACATGCGATTACGAAGGCATAAAATGGGCGTTGATGATTTTGAGCTTTTGACTATTATAGGAAGGGGTGCATTTGGGGAGGTGAGGCTTTGCAAGGAAAAAACCACAGGCCATGTATATGCCATGAAAAAACTTAAGAAATCTGAGATGCTTCGGCGAGGCCAGGTTGAACACGTGAAGGCTGAGAGAAATCTTTTAGCTGAGGTTGATAGTGCGTATATTGTCAAGCTTTACTGCTCTTTTCAAGATGATGAGTTTTTGTATCTTATTATGGAGTATCTTCCTGGAGGTGATGTGATGACATTACTGATGCGCAAGGACACTTTGACTGATGATGAGGCAATGTTTTACGTTGGAGAGACAGTACTTGCCATCGAATCTATCCACATGCACAATTACATCCACAGGGACATAAAGCCTGACAATTTACTACTTGATCGTTATGGTCATCTTAAACTTTCAGACTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCGAATCTTAGTGAGAATGACTACCAAATAGAAAGGAATCAGAAGCCTATTGAAAGAAATGAGTTCCCTTCTAGCTTCCAGGCTGTACAAAGACGGACTCAGCAGGAACAGTTGTTGCATTGGCAAAAGAATAGACGAACGTTGGCCTATTCAGCGGTTGGAACTCCTGATTACATTGCGCCTGAGGTATTGTTGAGGAAAGGATATGGAATGGAGTGTGACTGGTGGTCTCTGGGAGCAATCATGTATGAGATGCTTGTGGGATATCCACCTTTTTATTCTGAAGATCCAATGTCAACATGCCGAAAGATAGTTAACTGGAGGGTGCATTTGAAATTCCCTGAAGAGGCCAAGCTGTCTGCTGAGGCGAAAGATCTAATTTGCAAACTTCTTTGCAACGTTGACCAAAGGCTTGGAACAAAAGGAGCTTTTGAAATCAAAGCACACCCTTGGTTTAGAGGACTAAAATGGGATAAACTGTATCAAATGGAAGCTGCGTTCATTCCAGAGGTCAAAGATGAGTTAGATACTCAAAACTTTGAGAAGTTTGAAGAGGTCTCCCCCGCTCAAACTCCCACAAAATCAGGTCCTTGGAGAAAGGCAAGTCCCAAAATTGTTCTATTTTGCATTTAA 1410 41.91 MDSARSWFQKFQHRDNRETEDAKDVDEAPSGATKQKVEAAKQYIENHYKSQMKSLQDRKERRWVMERRLADADASEEDQMNVLKYLERQETEYMRLRRHKMGVDDFELLTIIGRGAFGEVRLCKEKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDDEFLYLIMEYLPGGDVMTLLMRKDTLTDDEAMFYVGETVLAIESIHMHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKPLESSSFPNLSENDYQIERNQKPIERNEFPSSFQAVQRRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIVNWRVHLKFPEEAKLSAEAKDLICKLLCNVDQRLGTKGAFEIKAHPWFRGLKWDKLYQMEAAFIPEVKDELDTQNFEKFEEVSPAQTPTKSGPWRKASPKIVLFCI 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5298690 5311278 - Bma005926.1 Bma11g00453 90855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00453 469 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 25 460 - -
Bma11g00453 469 Pfam Protein kinase domain 107 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00453 469 MobiDBLite consensus disorder prediction 7 31 - -
Bma11g00453 469 Gene3D Phosphorylase Kinase; domain 1 97 191 - -
Bma11g00453 469 ProSiteProfiles Protein kinase domain profile. 106 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00453 469 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Bma11g00453 469 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 460 - -
Bma11g00453 469 Gene3D Transferase(Phosphotransferase) domain 1 192 428 - -
Bma11g00453 469 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma11g00453 469 SUPERFAMILY Protein kinase-like (PK-like) 86 458 IPR011009 -
Bma11g00453 469 MobiDBLite consensus disorder prediction 1 36 - -
Bma11g00453 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Bma11g00453 469 CDD STKc_NDR_like 104 459 - -
Bma11g00453 469 SMART serkin_6 106 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00553 Bma-Chr7:7524914 Bma11g00453 Bma-Chr11:5298690 0 dispersed
Bma11g00453 Bma-Chr11:5298690 Bma15g00522 Bma-Chr15:6002312 0 dispersed
Bma11g00453 Bma-Chr11:5298690 Bma09g00765 Bma-Chr9:46175670 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66779 PF00069 Pkinase 1.90E-63 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00453 K08790 - zju:107433847 791.571