Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00453 | ATGGATTCTGCTAGAAGTTGGTTTCAGAAATTTCAACATAGAGACAACAGGGAAACTGAGGATGCGAAAGATGTTGATGAAGCCCCTTCCGGTGCAACAAAGCAGAAAGTTGAGGCTGCAAAGCAATATATTGAGAATCATTATAAATCTCAAATGAAGTCACTGCAAGATAGGAAAGAGAGGCGTTGGGTCATGGAAAGGAGGCTTGCCGATGCTGATGCTTCGGAGGAAGATCAAATGAACGTGTTGAAATATTTAGAGAGACAAGAGACAGAATACATGCGATTACGAAGGCATAAAATGGGCGTTGATGATTTTGAGCTTTTGACTATTATAGGAAGGGGTGCATTTGGGGAGGTGAGGCTTTGCAAGGAAAAAACCACAGGCCATGTATATGCCATGAAAAAACTTAAGAAATCTGAGATGCTTCGGCGAGGCCAGGTTGAACACGTGAAGGCTGAGAGAAATCTTTTAGCTGAGGTTGATAGTGCGTATATTGTCAAGCTTTACTGCTCTTTTCAAGATGATGAGTTTTTGTATCTTATTATGGAGTATCTTCCTGGAGGTGATGTGATGACATTACTGATGCGCAAGGACACTTTGACTGATGATGAGGCAATGTTTTACGTTGGAGAGACAGTACTTGCCATCGAATCTATCCACATGCACAATTACATCCACAGGGACATAAAGCCTGACAATTTACTACTTGATCGTTATGGTCATCTTAAACTTTCAGACTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCGAATCTTAGTGAGAATGACTACCAAATAGAAAGGAATCAGAAGCCTATTGAAAGAAATGAGTTCCCTTCTAGCTTCCAGGCTGTACAAAGACGGACTCAGCAGGAACAGTTGTTGCATTGGCAAAAGAATAGACGAACGTTGGCCTATTCAGCGGTTGGAACTCCTGATTACATTGCGCCTGAGGTATTGTTGAGGAAAGGATATGGAATGGAGTGTGACTGGTGGTCTCTGGGAGCAATCATGTATGAGATGCTTGTGGGATATCCACCTTTTTATTCTGAAGATCCAATGTCAACATGCCGAAAGATAGTTAACTGGAGGGTGCATTTGAAATTCCCTGAAGAGGCCAAGCTGTCTGCTGAGGCGAAAGATCTAATTTGCAAACTTCTTTGCAACGTTGACCAAAGGCTTGGAACAAAAGGAGCTTTTGAAATCAAAGCACACCCTTGGTTTAGAGGACTAAAATGGGATAAACTGTATCAAATGGAAGCTGCGTTCATTCCAGAGGTCAAAGATGAGTTAGATACTCAAAACTTTGAGAAGTTTGAAGAGGTCTCCCCCGCTCAAACTCCCACAAAATCAGGTCCTTGGAGAAAGGCAAGTCCCAAAATTGTTCTATTTTGCATTTAA | 1410 | 41.91 | MDSARSWFQKFQHRDNRETEDAKDVDEAPSGATKQKVEAAKQYIENHYKSQMKSLQDRKERRWVMERRLADADASEEDQMNVLKYLERQETEYMRLRRHKMGVDDFELLTIIGRGAFGEVRLCKEKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDDEFLYLIMEYLPGGDVMTLLMRKDTLTDDEAMFYVGETVLAIESIHMHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKPLESSSFPNLSENDYQIERNQKPIERNEFPSSFQAVQRRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIVNWRVHLKFPEEAKLSAEAKDLICKLLCNVDQRLGTKGAFEIKAHPWFRGLKWDKLYQMEAAFIPEVKDELDTQNFEKFEEVSPAQTPTKSGPWRKASPKIVLFCI | 469 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5298690 | 5311278 | - | Bma005926.1 | Bma11g00453 | 90855 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00453 | 469 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 25 | 460 | - | - | |
Bma11g00453 | 469 | Pfam | Protein kinase domain | 107 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00453 | 469 | MobiDBLite | consensus disorder prediction | 7 | 31 | - | - | |
Bma11g00453 | 469 | Gene3D | Phosphorylase Kinase; domain 1 | 97 | 191 | - | - | |
Bma11g00453 | 469 | ProSiteProfiles | Protein kinase domain profile. | 106 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00453 | 469 | ProSitePatterns | Protein kinases ATP-binding region signature. | 112 | 135 | IPR017441 | GO:0005524 | |
Bma11g00453 | 469 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 25 | 460 | - | - | |
Bma11g00453 | 469 | Gene3D | Transferase(Phosphotransferase) domain 1 | 192 | 428 | - | - | |
Bma11g00453 | 469 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 412 | 469 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bma11g00453 | 469 | SUPERFAMILY | Protein kinase-like (PK-like) | 86 | 458 | IPR011009 | - | |
Bma11g00453 | 469 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Bma11g00453 | 469 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 225 | 237 | IPR008271 | GO:0004672|GO:0006468 | |
Bma11g00453 | 469 | CDD | STKc_NDR_like | 104 | 459 | - | - | |
Bma11g00453 | 469 | SMART | serkin_6 | 106 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00553 | Bma-Chr7:7524914 | Bma11g00453 | Bma-Chr11:5298690 | 0 | dispersed | |
Bma11g00453 | Bma-Chr11:5298690 | Bma15g00522 | Bma-Chr15:6002312 | 0 | dispersed | |
Bma11g00453 | Bma-Chr11:5298690 | Bma09g00765 | Bma-Chr9:46175670 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66779 | PF00069 | Pkinase | 1.90E-63 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00453 | K08790 | - | zju:107433847 | 791.571 |