Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma11g00466 | ATGTACTTATTGCAGCTATGTAGTGGGGTTGATGAGAGTGCTGTTGGCTCCTGTGCCCAGCTTGTTTTTGCACCGATTGACGAATCATTTGCAGATGATGCTCCCCTGCTGCCTTCTGGTTTTCGGGTCATTCCGTTAGATCTCAAAACGGACGGGCCTGGAATGACCGCTCGAACTTTGGATTTGGCTTCTACCCTTGAAGTTGGGGCCGGTAGTGCTCGACTGGGCAGTGAAGCGGATTTGAACAGCTATAACCTTCGATCCGTATTAACAATCGCATTCCAATTTACTTTTGAGAATCACACGAGAGAAAATGTGGCTGCAATGGCTCGTCAGTATGTTCGGAGTGTGGTTGGCTCCGTGCAAAGGGTTGCTATGGCGATTGCCCCTTCGCGTATGAGCTCCCTCCTGGGCCCTAAACCCCTTGCTGCTTCTCCTGAAGCCGTTACTTTGGCCCGATGGATTTGCCGCAGTTACAGGATTCATATAGGGAGAGATCTCCTTCAAGCCGAATCGCAATCCGGTGATGTTATTTTGAGGCAACTGTGGCACCATTCTGATGCAATTATGTGCTGCTCGGTGGTGAAAACTAACGCATCTCCCATCTTCACCTTTGCCAACCAGGCAGGTCTCGACATGCTCGAAACTACTCTCGTGGCCCTCCAAGATATAATGCTCGACAAGATTCTCGGCGACGGAGGCAGAAAAATTCTCTGCTCCGAATTCTCCAAGATTATGCAGCAGGGATTTGCTCATCTGCCTGCCAGAATTTGCACATCTAGCATGGGCAGACCCGTAACATACGAGCAGGCCGTCACTTGGAAAGTCCTCGACGACGACGACTCGAATCACTGCCTGGCGATTATGTTCATTAACTGGTCTTTTGTATGA | 891 | 49.94 | MYLLQLCSGVDESAVGSCAQLVFAPIDESFADDAPLLPSGFRVIPLDLKTDGPGMTARTLDLASTLEVGAGSARLGSEADLNSYNLRSVLTIAFQFTFENHTRENVAAMARQYVRSVVGSVQRVAMAIAPSRMSSLLGPKPLAASPEAVTLARWICRSYRIHIGRDLLQAESQSGDVILRQLWHHSDAIMCCSVVKTNASPIFTFANQAGLDMLETTLVALQDIMLDKILGDGGRKILCSEFSKIMQQGFAHLPARICTSSMGRPVTYEQAVTWKVLDDDDSNHCLAIMFINWSFV | 296 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 5606805 | 5608123 | + | Bma005946.1 | Bma11g00466 | 90868 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma11g00466 | 296 | Pfam | MEKHLA domain | 150 | 295 | IPR013978 | - | |
| Bma11g00466 | 296 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 | 1 | 296 | IPR044830 | GO:0003700 | |
| Bma11g00466 | 296 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 | 1 | 296 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma11g00466 | Bma-Chr11:5606805 | Bma14g00456 | Bma-Chr14:5244387 | 7.17E-130 | dispersed | |
| Bma11g00442 | Bma-Chr11:4998763 | Bma11g00466 | Bma-Chr11:5606805 | 0 | wgd | |
| Bma11g00466 | Bma-Chr11:5606805 | Bma07g00448 | Bma-Chr7:5441162 | 3.21E-150 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma11g00466 | K09338 | - | jre:109011210 | 502.671 |