Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00485 ATGGAGGGTCTGATTAATAGAGGGTTTCTCAGCGTTTCTGTTTGTGGGCAAGAAGAATTAGAGCAAATTTCGAGAGATGGCAGCCATTATAGCTTAGCTACTGGTGTTTTGCCGTCGCTAGGGGCGAGAAGCAATCGGAGAATCAAGCTCCGGCGGTTCATTGTGTCGCCCTATGACCGCCGATACAGGTTCTGGGAGACATTTCTGATTATTCTCGTTGTTTACACTGCTTGGGTTTCTCCGTTTGAATTTGGATTCCTTAAAAAGCCAGAGGGCCCACTCGCAATAGCTGATAATGTCGTCAATGGTTTCTTTGCCATTGATATTATTCTCACTTTCTTTGTTGCTTACTTGGACAAAGCTACTTATCTTCTCGTTGATGAACCAAAGAAAATTGCTTGGAAATATACAAGATCCTGGTTGGCCTTTGACGTCATTTCAACAATCCCTTCTGAACTTGCTCAAAAGATGTTCCGATTTCAATCTTATGGCTTCTTTAACATGCTTCGCCTTTGGCGTCTGCGTCGTGTTAGCAAGCTTTTCTCCAGATTGGAGAAAGATAGACATTACAACTACTTTTGGGTTAGGTGTGCAAAGCTTGTCTGTGTTACCCTTTTTGCCGTTCATGCTGCAGCATGCTTCTATTATCTGATTGCTGCTCGATATCACGACCTGAAAAAGACATGGATTGGTGCTTCCATGGGGAATTTTCTTGAGGAAAGCTTGTGGATAAGATATGTGACTTCCATTTACTGGTCTATCACTACTCTAACGACTGTCGGATATGGTGATCTCCATCCGGTGAATATAAGAGAGATGATTTTCGACATTTTCTACATGCTTTTCAATCTCGGCTTGACAGCATACTTGATCGGAAACATGACCAACTTGGTTGTTCATGGGACCAGTCGAACTAGGAGATTTAGAGATACAATACAAGCTGCTTCGAGTTTCGCTCAGAGGAATCAACTTCCTCCTCGGTTGCAAGATCAAATGCTCGCACATTTATGTCTAAAGTTTAGAACAGATTCCGAAGGACTTCAACAGCAGGAGAGTCTCGATTCTCTCCCGAAAGCCATCCGATCCAGCATTGCGCATTATCTCTTCTACTCTCTCGTCGATAAAGTCTACTTATTCCGTGGAGTCTCGAACGACTTGCTCTTTCAACTAGTCTCGGAGATGAAAGCCGAATACTTTCCTCCAAAAGAAGATGTTATCTTGCAGAACGAAGCCCCGACCGACTTCTACATTCTCGTCACTGGAGCTGTGGATTTAATTGTCATGAAAAATGGAGCAGAACAAGTCGTGAGAGAAGGAAAGACAGGCGACCTCTGCGGTGAAATAGGAGTTCTTTGTTATCGACCTCAATTGTTCACGGTTCGAACAAAGAGATTGTGCCAACTTCTGCGATTAAATCGCACGACATTCTTGAACACCGTTCAAGCAAATGTCGGTGATGGGACGATAATCATGAACAATCTCCTTCAGCATTTGAAGGAACAAAAGGACCCAATAATGGAGGGTGTTTTGTTGGAGACAGAGAACATGTTGGCTCGAGGACGGATGGACTTACCTCTGAGTCTTTGCTTTGCAACCATGAGAGGCGATGATCTGCTCTTGCACCAGCTTTTGAAAAGAGGGTTGGATCCGAATGAATCAGACAACAATGGCAGATCGGCTCTGGTATGA 1689 43.87 MEGLINRGFLSVSVCGQEELEQISRDGSHYSLATGVLPSLGARSNRRIKLRRFIVSPYDRRYRFWETFLIILVVYTAWVSPFEFGFLKKPEGPLAIADNVVNGFFAIDIILTFFVAYLDKATYLLVDEPKKIAWKYTRSWLAFDVISTIPSELAQKMFRFQSYGFFNMLRLWRLRRVSKLFSRLEKDRHYNYFWVRCAKLVCVTLFAVHAAACFYYLIAARYHDLKKTWIGASMGNFLEESLWIRYVTSIYWSITTLTTVGYGDLHPVNIREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRRFRDTIQAASSFAQRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQESLDSLPKAIRSSIAHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLIVMKNGAEQVVREGKTGDLCGEIGVLCYRPQLFTVRTKRLCQLLRLNRTTFLNTVQANVGDGTIIMNNLLQHLKEQKDPIMEGVLLETENMLARGRMDLPLSLCFATMRGDDLLLHQLLKRGLDPNESDNNGRSALV 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6033947 6037031 + Bma005967.1 Bma11g00485 90887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00485 562 Gene3D Jelly Rolls 342 504 IPR014710 -
Bma11g00485 562 SUPERFAMILY Voltage-gated potassium channels 57 299 - -
Bma11g00485 562 SMART cnmp_10 378 495 IPR000595 -
Bma11g00485 562 Pfam Ion transport protein 63 305 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bma11g00485 562 PANTHER K+ TRANSPORTER 1-RELATED 8 561 - -
Bma11g00485 562 PANTHER POTASSIUM CHANNEL AKT1 8 561 IPR045319 GO:0005249|GO:0006813
Bma11g00485 562 Gene3D - 63 299 - -
Bma11g00485 562 ProSiteProfiles cAMP/cGMP binding motif profile. 378 476 IPR000595 -
Bma11g00485 562 CDD CAP_ED 378 483 IPR000595 -
Bma11g00485 562 SUPERFAMILY cAMP-binding domain-like 303 498 IPR018490 -
Bma11g00485 562 PRINTS EAG/ELK/ERG potassium channel family signature 109 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00485 562 PRINTS EAG/ELK/ERG potassium channel family signature 290 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00485 562 PRINTS EAG/ELK/ERG potassium channel family signature 98 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00485 562 PRINTS EAG/ELK/ERG potassium channel family signature 272 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00485 562 PRINTS EAG/ELK/ERG potassium channel family signature 75 82 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00485 562 PRINTS EAG/ELK/ERG potassium channel family signature 246 263 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00485 562 Pfam Cyclic nucleotide-binding domain 398 482 IPR000595 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00455 Bma11g00485 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00105 Bma-Chr8:1237938 Bma11g00485 Bma-Chr11:6033947 2.29E-80 dispersed
Bma11g00485 Bma-Chr11:6033947 Bma01g02496 Bma-Chr1:82671441 2.26E-14 dispersed
Bma11g00485 Bma-Chr11:6033947 Bma07g00455 Bma-Chr7:5495345 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00485 K21867 - vvi:100266175 1004.59