Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00506 ATGGCCGTCAAAGCTGCTCGCGAAGCCTTCGATCATGGGCCATGGCCCCGCCTCCCAGGCTTCGAAAGAGGAAAGATCATGATGAAATTTGCAGACTTGGTTGACCAACACGTGGAAGAGCTGGCTGCGTTAGACACCATTGATGCTGGTAAATTGTATGCGTCTGGAAAGGCAGCGGATATTCCGGAGGCGGCAAACACGCTGCGGTACTACGCAGGCGCAGCCGATAAGATTCACGGGGATGTGCTGAAAATGGGTGGCGACCTCCATGGTTACACTCTGCAAGAGCCCGTCGGCGTTGTCGGCCATGTCATCCCTTGGAATTTCCCCACCACAATGTTCTTCTGCAAGGTCAGCCCTGCCTTGGCCGCCGGCTGCACCATGATTGTTAAGCCCGCTGAGCAGAGCTCGCTTTCCGCTCTCTACTATGCTCATCTTTCTAAGCTGGCTGGTATTCCTGATGGAGTGCTGAATGTGGTAACTGGATTTGGAAAGACAGCTGGGGCAGCTCTGTGCTCTCATATGGACGTTGATAAAATAAGCTTCACTGGGTCGACGGAGGTCGGGCGACAAATAATGCACGCCGCCGCAAGCAGCAATTTGAAGTCGTTGTGCCTAGAATTAGGCGGCAAATCACCTCTCGTAATCTTTGACGACGCCGATTTAGACCAAGCGGCTCAGCTGGCACTCATCGGCATTCTCTTCAACAAGGGAGAGATTTGCGTGGCAAGTTCAAGAGTCTTTGTCCAAGAAGGAATTTATGATGAACTAGTGAAGAAACTAGTGGAAATGGCCAACAGTTGGGTGGTAGGAGATCCTTTCGATCCAAAAGTTCAACAAGGACCGCAGGTGGATAAGAAGCAGTTCGAGAAAATCCTTTCATATATAGAGAGTGGGAAGAGAGAAGGAGCCACTCTGCTAACTGGTGGCAAACCCATAGGCAACAAAGGCTATTTCATCGAGCCCACAATTTTCACCGATGTCAAGGAGCATATGGCCATATGTCAAGATGAAATATTTGGACCAGTCATGTCCCTTATGAAATTCAAGACGATGGAGGACGCGATAAAGAGTGCAAACAACACGAGATACGGGCTTGCAGCGGGCATCGTGACCAAGAACATAGACATAGCGAACACGGTGTCGAGGTCGATAAGAGCAGGGATTGTGTGGGTGAACTGCTACTTTGCTTTTGACAGAGGCTGTCCTTACGGAGGCTACAAAATGAGTGGGTTTGGCAGAGATTTTGGGATGGAAGCCATCAACAACTATCTCCAAATTAAATCCGTCGTCACTCCTTTGTATAACACCCCTTGGCTTTGA 1323 49.89 MAVKAAREAFDHGPWPRLPGFERGKIMMKFADLVDQHVEELAALDTIDAGKLYASGKAADIPEAANTLRYYAGAADKIHGDVLKMGGDLHGYTLQEPVGVVGHVIPWNFPTTMFFCKVSPALAAGCTMIVKPAEQSSLSALYYAHLSKLAGIPDGVLNVVTGFGKTAGAALCSHMDVDKISFTGSTEVGRQIMHAAASSNLKSLCLELGGKSPLVIFDDADLDQAAQLALIGILFNKGEICVASSRVFVQEGIYDELVKKLVEMANSWVVGDPFDPKVQQGPQVDKKQFEKILSYIESGKREGATLLTGGKPIGNKGYFIEPTIFTDVKEHMAICQDEIFGPVMSLMKFKTMEDAIKSANNTRYGLAAGIVTKNIDIANTVSRSIRAGIVWVNCYFAFDRGCPYGGYKMSGFGRDFGMEAINNYLQIKSVVTPLYNTPWL 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6312388 6315066 - Bma005988.1 Bma11g00506 90908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00506 440 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 440 - -
Bma11g00506 440 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 428 IPR016162 GO:0016491
Bma11g00506 440 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 234 245 IPR016160 GO:0016491
Bma11g00506 440 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 1 440 - -
Bma11g00506 440 SUPERFAMILY ALDH-like 2 436 IPR016161 GO:0016491
Bma11g00506 440 Pfam Aldehyde dehydrogenase family 2 430 IPR015590 GO:0016491
Bma11g00506 440 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 206 213 IPR029510 GO:0016491
Bma11g00506 440 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 210 399 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01773 Bma-Chr1:60456044 Bma11g00506 Bma-Chr11:6312388 0 dispersed
Bma08g00185 Bma-Chr8:2251663 Bma11g00506 Bma-Chr11:6312388 3.82E-118 dispersed
Bma11g00506 Bma-Chr11:6312388 Bma12g01022 Bma-Chr12:42322685 1.27E-110 dispersed
Bma11g00506 Bma-Chr11:6312388 Bma07g00481 Bma-Chr7:5816668 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00506 K12355 - jre:108992688 723.391