Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00518 | ATGTCAACTCCTACTCCGGCGCCGGATACCAACGCAACGGCGCCTCCCCCGCCGACTGTGAGTCCTCCACCATCAGCTACTCCCTCTTCCCCGCCGCCACCTGCTGACTCTGTGCCACCTCCCGTCGCTAATTCTCCGCCTCCTCCTGCTTCTGCCCCGCCTCCAGAAACTCCATCGCCACCTCCACCTACTGCTCCTGCTCCTACGCCTCCTACGCCTGCTCCGCCTCCACCCTCAACGCCTTCGTCATCTCCACCTCCGCCATCAACATCTTCTCCACCACCTTCCTCTGATTCTCCCCCTCCGCCGGTAGCCTCTTCACCACCACCTACTACCGCGTCTCCACCTCCGCCGTCAGACTCTTCACCGCCGACTTCTTCTGCCTCTCCGCCTCCTCCATCAAGATCTTCACCGCCGGCTACTTCAGCCTCTCCCCCTCCGCCTTCAACCCCTTCTCCGCCGACTTCCTCGGCCTCTCCACCTCCTCCGCGATCATCATCCTCCCCCCCTCCTCCTCCTCCTTCTACCAACTCGACTACTCCGTCGCTTCTGAGCCCGCCTCCTCCTTTGAGTTCGGGTTCAACACCGGCCAGGAGTCCGCCACCGCCTCCGTCAACCTCAACTTCTTCGTCATCTGGAATTTCTGCAGGGGTTGTAGTTGGAATAGCCATCGGCGGACTCGCAATTCTTTTGGTTTTAATTATATTCTTCGTATGCTTCAGAAAGAAAAGGCGGCACCATGTTGAGGAGGCTTTCCATGCGCAGCCTCCATTGGCAGGGTATAAAGATGACCCATATGGTGGCCCGCCAAACCACTGGCGCCAAAACGCTCCGCAGCCTCCTGGCCCGATTGTGGGATTAATGGCCAAACCATCTCCTCCTCCGGCAGTGAATGCTTATACGCCACCCTTTTTACAGCCATACATCAGTAGTAGTGGAGGTTCTGGCTCTAATTATTCCGGGCCTGAAACACCGCTCCCTCCTCCACCACCCGGCTCTGTATTAGGATTCTCTAAGAGCACTTTTACTTATGAGGAATTAGCATTGGCCACAGATGGTTTCTCAGAAGCTAACCTCCTCGGACAAGGTGGTTTTGGGTATGTGCATAGAGGAGTTCTTCCTAATGGGAAAGAAGTGGCAGTCAAGCAGCTTAAAGCTGGAAGCGGCCAAGGGGAGCGTGAATTTCAAGCAGAAGTTGAAATTATTAGCCGAGTGCACCATAGACATCTCGTTTCACTCGTTGGATATTGCATCACTGGGTCTCAGAGACTGCTGGTGTATGATTATATTCCCAACAATACATTGGAGTTCCACTTACACGAAAAAGGACGACCTACCATGGATTGGCCATCGAGAATGAGAATCGCCTTGGGATCTGCAAAAGGGCTGGCATACCTTCATGAGGATTGCAATCCTAAAATTATCCATCGTGACATAAAAGCAGCCAATATTCTACTAGATTTTAAGTTTGAGGCGAAGGTGGCTGATTTTGGACTTGCAAAGTTTACTTCTGACATTAATACTCATGTATCTACCCGAGTGATGGGAACTTTTGGATATCTTGCTCCAGAATATGCTTCGAGTGGCAAACTATCTGAAAAATCGGATGTTTTCTCCTTCGGAGTCATGCTTTTGGAGTTGATTACTGGGCATAGACCTGTGGATGCTACTCAGACTTTCATGGAGGATAGTTTAGTGGACTGGGCTAGACCTTTACTTATCAGAGCTGTTGAAGATGAGAACTTTGATGGTCTGATAGACCCAAAGCTGCAAGGTAATTTCAGCCCCACAGAGATGGCTCGAATGGTTGCTTGTGCGGCTGCTTGTGTGCGTCATTCCGCAAAGCGTCGACCAAGGATGAGTCAGGTGGTTCGAGCTCTAGAAGGGGACGCAACTATAGCCGATCTCAACGAGGGAGTGAGACCAGGACATAGCACTGTATATGGGGAAAGCTCTGACTATGACTCGAGCCAATACAAGGAGGACATGAAGAAGTTCAGGAAAATGGCACTGGGAAGCCAGGAGTACGGTGCCAGCGGGGAGTACAGCGGCGGAACCAGCGACTACGGTCTGTACCCATCCGGGTCGAGCAGTGAGGGCCAAACAACTAGAGAAATGGAGCTGAGAAGGTTAAGGAATGGAAGTCAAGGATTTAGCTGA | 2160 | 52.22 | MSTPTPAPDTNATAPPPPTVSPPPSATPSSPPPPADSVPPPVANSPPPPASAPPPETPSPPPPTAPAPTPPTPAPPPPSTPSSSPPPPSTSSPPPSSDSPPPPVASSPPPTTASPPPPSDSSPPTSSASPPPPSRSSPPATSASPPPPSTPSPPTSSASPPPPRSSSSPPPPPPSTNSTTPSLLSPPPPLSSGSTPARSPPPPPSTSTSSSSGISAGVVVGIAIGGLAILLVLIIFFVCFRKKRRHHVEEAFHAQPPLAGYKDDPYGGPPNHWRQNAPQPPGPIVGLMAKPSPPPAVNAYTPPFLQPYISSSGGSGSNYSGPETPLPPPPPGSVLGFSKSTFTYEELALATDGFSEANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYDYIPNNTLEFHLHEKGRPTMDWPSRMRIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDINTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGVMLLELITGHRPVDATQTFMEDSLVDWARPLLIRAVEDENFDGLIDPKLQGNFSPTEMARMVACAAACVRHSAKRRPRMSQVVRALEGDATIADLNEGVRPGHSTVYGESSDYDSSQYKEDMKKFRKMALGSQEYGASGEYSGGTSDYGLYPSGSSSEGQTTREMELRRLRNGSQGFS | 719 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6483183 | 6489068 | + | Bma006002.1 | Bma11g00518 | 90920 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00518 | 719 | ProSitePatterns | Protein kinases ATP-binding region signature. | 360 | 382 | IPR017441 | GO:0005524 | |
Bma11g00518 | 719 | MobiDBLite | consensus disorder prediction | 1 | 213 | - | - | |
Bma11g00518 | 719 | SUPERFAMILY | Protein kinase-like (PK-like) | 329 | 627 | IPR011009 | - | |
Bma11g00518 | 719 | SMART | serkin_6 | 354 | 615 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00518 | 719 | Gene3D | Phosphorylase Kinase; domain 1 | 332 | 429 | - | - | |
Bma11g00518 | 719 | Pfam | Protein tyrosine and serine/threonine kinase | 358 | 627 | IPR001245 | GO:0004672|GO:0006468 | |
Bma11g00518 | 719 | MobiDBLite | consensus disorder prediction | 676 | 719 | - | - | |
Bma11g00518 | 719 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 101 | 707 | - | - | |
Bma11g00518 | 719 | ProSiteProfiles | Protein kinase domain profile. | 354 | 633 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00518 | 719 | Gene3D | Transferase(Phosphotransferase) domain 1 | 430 | 638 | - | - | |
Bma11g00518 | 719 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 474 | 486 | IPR008271 | GO:0004672|GO:0006468 | |
Bma11g00518 | 719 | MobiDBLite | consensus disorder prediction | 1 | 207 | - | - | |
Bma11g00518 | 719 | MobiDBLite | consensus disorder prediction | 257 | 290 | - | - | |
Bma11g00518 | 719 | PRINTS | Proline rich extensin signature | 42 | 63 | - | - | |
Bma11g00518 | 719 | PRINTS | Proline rich extensin signature | 21 | 33 | - | - | |
Bma11g00518 | 719 | PRINTS | Proline rich extensin signature | 1 | 17 | - | - | |
Bma11g00518 | 719 | PANTHER | SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 101 | 707 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g00187 | Bma11g00518 | CCT | |
Bma07g00491 | Bma11g00518 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g00792 | Bma-Chr6:40568896 | Bma11g00518 | Bma-Chr11:6483183 | 0 | dispersed | |
Bma09g00074 | Bma-Chr9:1824425 | Bma11g00518 | Bma-Chr11:6483183 | 0 | dispersed | |
Bma11g00518 | Bma-Chr11:6483183 | Bma15g01003 | Bma-Chr15:38971692 | 0 | dispersed | |
Bma02g00657 | Bma-Chr2:18522393 | Bma11g00518 | Bma-Chr11:6483183 | 6.10E-59 | transposed | |
Bma01g00187 | Bma-Chr1:1684343 | Bma11g00518 | Bma-Chr11:6483183 | 0 | wgd | |
Bma11g00518 | Bma-Chr11:6483183 | Bma07g00491 | Bma-Chr7:5987505 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66780 | PF07714 | PK_Tyr_Ser-Thr | 3.70E-46 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00518 | - | - | jre:108980419 | 757.673 |