Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00532 ATGGGTTGCGTCTATTCAAGGATTTGTATTGGTGAGATTTCTACGCCAACAACTTCTAGACTTGCAGAGACTCAAAATGCAGGAATTGCTGCTGGAGTTGGAGTCTTCTCTCCCGCCTCTTCCAACGGCCAAGATGGAGAAGTGGTGGATCAGTTGAATCGGTTTAACACCAACAGAGATTCGGAGGCCGGTATTAGAAGACTCTCTAGGGTTTCATCGCAGTTTTTACCACCGGAAGGATCAAGAACTGTAAAAGTTCCACTTGGCAACTACGAACTACGCTATTCGTTTCTGTCACAGAGAGGCTATTATCCGGATGCTCTTGATAAGGCCAACCAAGACAGCTTTTGTATCCATACTCCATTTGGAACTAGCCCAGACGACCATTTCTTCGGGGTTTTCGATGGTCATGGAGAATTTGGAGCTCAATGCTCTCAGTACGTTAAGAGAAAAGTATGTGAAAATTTGCTCAGAAATACTAAATTCCAAAAAGACGCTGTTGAGGCTTGCCATGCGGCTTTTCTGGCAACAAATTCACAGCTTCACGCCGATATTTTAGACGACAGCATGAGTGGGACTACTGCTGTGACAATTCTGGTTCGAGGTAGGACCATCTATGTATCTAATTCAGGTGATTCGAGGGCGGTTCTTGCAGAGAAAAGAGGGAAGGATCTTGTAGCTGTTGACCTTTCAATTGATCATACTCCATTTAGGACAGATGAGCTCGAACGAGTTAAGCTTTGTGGGGCCAGAGTTCTCACATTGGATCAAATCGAGGGTCTAAAAGATCCAGATGTGCAATGTTGGGGAGCGGAAGAAGGCGATGAAGGTGATCCTCCAAGGCTCTGGGTCCCAAATGGGATGTATCCTGGGACGGCTTTTACGAGAAGTATAGGTGATTCACTTGCTGAGACAATTGGGGTTGTTGCTACTCCTGAAATTGTTGTTTTTGAGCTTACATCAAATAATCCTTTCTTCGTACTCGCTAGTGATGGGGTGTTCGAGTTTCTTTCCAGTCAAACAGTTATCAACATGGTTGCAAAATACAAAGATCCTCGTGATGCTTGTGCTGCGATTGTAGCCGAGTCTTATAGACTTTGGCTACAGTACGAAACTCGGACAGATGATATTACAGTGATCGTTGTGCATATCAATGGCCTAACTAATTCTGTTGGTGAATCAGAAAAAATTGGTGGTTTGATACGCTCACCAATCCCTCAAGTAGTTGAGGTTACAGGTTCAGAATCTCCCTCAATGTTTGGTTGGAATTCGAGGATCCATCGTGTGAGGCAAGATTTGTCAAAGGCTCGCCTTCGTGCTATTGAAACTTCTCTAGAGAATGGTCAGATATGGGTTCCTCCATCTCCGGCCCATAGGAAGACATGGGAAGAAGAAGCGCAAATTGAGCGATCACTGCATGACCATTTCCTTTTCCGAAAATTAACCAACTCTCAGCGGCACGTTTTACTAGATTGCATGCAAAGAGTAGAGATCCATCCTGGAGAAATTGTAGTTAAACAGGGTAGTGAAGGTGATTGTTTTTACGTTGTTGGAAGTGGAGAATTTGAGGTCTTGGCAACCCAGCAAGAGAATGATGGAGAGGTTCCTCGAGTTCTGCAGCACTACACAGCTGAGAAGTTTTCATCTTTTGGAGAACTAGCACTAATGTCTAACAAACCACTCCAAGCATCTGTTCGAGCCGTAACAAGTGGAACATTATGGGCTTTGAAAAGAGAAGATTTTCGTGGAATTCTCATGTCAGAGTTTACTAATTTGTCATCGTTGAAGCTCCTTCGATCAGTTGATCTTTTATCAAGGTTGACAATCTTGCAGCTGAGTAACATTTCTGATAGTCTTTCTGAAGTTGCCTTTTCAAATGGGCAGGTGATAGTTGATAAGAGCAAAGACCTACTTGCATTGCACATCATCCAAAAGGGAGAAGTTAGGATTACTTTTGATGCTGAGTTAGTGACCAGTTTGAACATTCAAAGCCTAAAATCTGGCAATTATGAAGAAGATGAAAACCCACAAAGCAGCAGAGAAATCTCGTTGGTCAAGGAAGAAGGAAGTTATTTTGGTGAATGGGCTCTTCTCGGTGAGCGTATTGAATCCTTTAGTGCTGTTGCTGTGGGTAATGTTGTATGCGCTGTCTTAACAAAGGAACAATTCGAGTCTGTCGTTGGCCCTTTACCAAAGCTTCCTCCAGATGATCAGAAGATGACAGAATATTCTTCAAACGTTCTCAAGGAACCTACAAAAAGTATTGATATTTCAGCTCTCAATGATGTTGAGCTCTCTGATCTGGAGTGGAGAACGTGCTTATACGCCAACGATTGCAGTGAGATTGGTATCGTATTGTTAAGAAATCCAGAGCTTCTGCTCAGTTTGAAGAGATTTTCAAAGCATAAAGTAAAAAAGCTTGGGAAGGAAGAACAAGTGTTAAAGGAGAAGAATCTTTTGATGAGTTTGAGCCAATCAACTTGCGTTCCGCAGATCCTTTGCACTCGTGTAGATCAAACACATGCTGGGATATTGCTGAATACATGCCTTGCTTGTCCTTTGTCTTCTATACTTCACACCCAGTTAGATGAGTCTTCTGCTCGATTTTTTGCTGCTTCTCTTGTCATTGCCTTAGATGATTTGCACCAGCATGGTGTACTCTACAGAGGAATTTCTCCTGATGTTATAATGCTTGACCAAACAGGACATATACAGCTTGTGGACTTCAGATTTGGAAAAAAGATATGTGGTGAGAGGACATTCACTGCTTGTGGAATGACAGACTTCTTAGCTCCAGAGATAGTCCAAGGAAAAGGCCATGGTTTTGCTGCTGACTGGTGGGCACTGGGAGTCTTGATCTATTACATGCTAAAAGGTGAAAAGCCATTTGGATCATGGAGAGAGAGTGAACTCGATACATTTGCCAAAATCGCGAAAGGAAAATTAAAGCTTCCTCAGATTTTCAACCCCCAAGTCATTGATCTCATATCCAAGTTGCTTGAAGTTGATGAAAGCTCGAGGCTTGGAACTGAAGGTTCAAATTCAGTCAAAAGTCATCCATGGTTTGACGGTGTAGATTGGGACGGGATTAAAGAATGTAGCTTTCCTGTTCCTGATTCTATCCTCTCCCGTCTAACTCAACACCTCGACAATCCGATTCCCTTACTTAACCAACCTCAGGACCCGGAAATTGATGTTCCTGATTGGATCGAAGGGTGGTAG 3222 43.02 MGCVYSRICIGEISTPTTSRLAETQNAGIAAGVGVFSPASSNGQDGEVVDQLNRFNTNRDSEAGIRRLSRVSSQFLPPEGSRTVKVPLGNYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSPDDHFFGVFDGHGEFGAQCSQYVKRKVCENLLRNTKFQKDAVEACHAAFLATNSQLHADILDDSMSGTTAVTILVRGRTIYVSNSGDSRAVLAEKRGKDLVAVDLSIDHTPFRTDELERVKLCGARVLTLDQIEGLKDPDVQCWGAEEGDEGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVVATPEIVVFELTSNNPFFVLASDGVFEFLSSQTVINMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLTNSVGESEKIGGLIRSPIPQVVEVTGSESPSMFGWNSRIHRVRQDLSKARLRAIETSLENGQIWVPPSPAHRKTWEEEAQIERSLHDHFLFRKLTNSQRHVLLDCMQRVEIHPGEIVVKQGSEGDCFYVVGSGEFEVLATQQENDGEVPRVLQHYTAEKFSSFGELALMSNKPLQASVRAVTSGTLWALKREDFRGILMSEFTNLSSLKLLRSVDLLSRLTILQLSNISDSLSEVAFSNGQVIVDKSKDLLALHIIQKGEVRITFDAELVTSLNIQSLKSGNYEEDENPQSSREISLVKEEGSYFGEWALLGERIESFSAVAVGNVVCAVLTKEQFESVVGPLPKLPPDDQKMTEYSSNVLKEPTKSIDISALNDVELSDLEWRTCLYANDCSEIGIVLLRNPELLLSLKRFSKHKVKKLGKEEQVLKEKNLLMSLSQSTCVPQILCTRVDQTHAGILLNTCLACPLSSILHTQLDESSARFFAASLVIALDDLHQHGVLYRGISPDVIMLDQTGHIQLVDFRFGKKICGERTFTACGMTDFLAPEIVQGKGHGFAADWWALGVLIYYMLKGEKPFGSWRESELDTFAKIAKGKLKLPQIFNPQVIDLISKLLEVDESSRLGTEGSNSVKSHPWFDGVDWDGIKECSFPVPDSILSRLTQHLDNPIPLLNQPQDPEIDVPDWIEGW 1073
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6782208 6788471 + Bma006020.1 Bma11g00532 90934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00532 1073 Gene3D - 89 385 IPR036457 -
Bma11g00532 1073 SUPERFAMILY cAMP-binding domain-like 596 732 IPR018490 -
Bma11g00532 1073 CDD CAP_ED 603 733 IPR000595 -
Bma11g00532 1073 Pfam Protein phosphatase 2C 123 362 IPR001932 -
Bma11g00532 1073 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Bma11g00532 1073 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Bma11g00532 1073 PRINTS cAMP-dependent protein kinase signature 723 735 - -
Bma11g00532 1073 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Bma11g00532 1073 SUPERFAMILY Protein kinase-like (PK-like) 788 1053 IPR011009 -
Bma11g00532 1073 Pfam Cyclic nucleotide-binding domain 622 727 IPR000595 -
Bma11g00532 1073 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Bma11g00532 1073 SMART cnmp_10 603 745 IPR000595 -
Bma11g00532 1073 SMART cnmp_10 477 600 IPR000595 -
Bma11g00532 1073 ProSiteProfiles cAMP/cGMP binding motif profile. 603 729 IPR000595 -
Bma11g00532 1073 Gene3D Phosphorylase Kinase; domain 1 780 852 - -
Bma11g00532 1073 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Bma11g00532 1073 CDD CAP_ED 477 586 IPR000595 -
Bma11g00532 1073 ProSiteProfiles Protein kinase domain profile. 749 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00532 1073 Pfam Protein kinase domain 794 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00532 1073 Gene3D Transferase(Phosphotransferase) domain 1 853 1035 - -
Bma11g00532 1073 SMART serkin_6 780 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00532 1073 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Bma11g00532 1073 Gene3D Jelly Rolls 593 745 IPR014710 -
Bma11g00532 1073 CDD PP2Cc 110 384 IPR001932 -
Bma11g00532 1073 SUPERFAMILY PP2C-like 81 386 IPR036457 -
Bma11g00532 1073 ProSiteProfiles PPM-type phosphatase domain profile. 94 384 IPR001932 -
Bma11g00532 1073 SUPERFAMILY cAMP-binding domain-like 457 587 IPR018490 -
Bma11g00532 1073 SMART PP2C_4 90 382 IPR001932 -
Bma11g00532 1073 Gene3D Jelly Rolls 453 592 IPR014710 -
Bma11g00532 1073 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 37 1051 - -
Bma11g00532 1073 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 37 1051 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00509 Bma11g00532 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00863 Bma-Chr2:46610144 Bma11g00532 Bma-Chr11:6782208 1.25E-16 dispersed
Bma06g01532 Bma-Chr6:51689523 Bma11g00532 Bma-Chr11:6782208 2.03E-136 dispersed
Bma11g00532 Bma-Chr11:6782208 Bma05g01065 Bma-Chr5:49339079 6.11E-36 dispersed
Bma11g00532 Bma-Chr11:6782208 Bma07g00509 Bma-Chr7:6325921 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66782 PF00481 PP2C 7.30E-34 CL0238 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00532 - - zju:107431937 1687.16