Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00549 | ATGTCGTGGCAGGCGTACGTAGATGAACATTTGATGTGCGAAATCGATGGCCAGGGCCAGCATCTTGCCGCCGCGGCAATCCTCGGCCATGACGGCAGTGTTTGGGCCCAAAGCTCTTCCTTCCCTCAGTTGAAACCCAAGGAGATAGCTGACATACTCAAAGATTTTGAAGAACCAGGTCACCTTGCTCCTACAGGTTTACACCTTGGGGCTGCAAAATACATGGTAATCCAAGGAGAGGCTGGTGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGAATCACCATTAAGAAGACTGGACAAGCCCTAATTTTTGGCATCTATGAAGAGCCTGTCACTCCAGGACAGTGCAACATGGTCGTTGAGAGGTTGGGGGATTACTTGATTGACCAAGGCCTTTAA | 402 | 50.5 | MSWQAYVDEHLMCEIDGQGQHLAAAAILGHDGSVWAQSSSFPQLKPKEIADILKDFEEPGHLAPTGLHLGAAKYMVIQGEAGAVIRGKKGSGGITIKKTGQALIFGIYEEPVTPGQCNMVVERLGDYLIDQGL | 133 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7350242 | 7352011 | - | Bma006042.1 | Bma11g00549 | 90951 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00549 | 133 | PANTHER | PROFILIN | 1 | 133 | - | - | |
Bma11g00549 | 133 | Pfam | Profilin | 1 | 132 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 132 | IPR036140 | - | |
Bma11g00549 | 133 | PANTHER | PROFILIN | 1 | 133 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 133 | - | - | |
Bma11g00549 | 133 | SMART | prof_2 | 1 | 133 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Plant profilin signature | 73 | 82 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Plant profilin signature | 29 | 42 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Plant profilin signature | 54 | 68 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Plant profilin signature | 106 | 119 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Plant profilin signature | 86 | 101 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Plant profilin signature | 119 | 132 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Profilin signature | 23 | 32 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Profilin signature | 115 | 132 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Profilin signature | 102 | 115 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Profilin signature | 66 | 80 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | PRINTS | Profilin signature | 42 | 62 | IPR005455 | GO:0003779 | |
Bma11g00549 | 133 | CDD | PROF | 2 | 132 | IPR005455 | GO:0003779 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00212 | Bma-Chr1:1882863 | Bma11g00549 | Bma-Chr11:7350242 | 3.11E-75 | dispersed | |
Bma06g00836 | Bma-Chr6:42349059 | Bma11g00549 | Bma-Chr11:7350242 | 5.93E-76 | dispersed | |
Bma11g00546 | Bma-Chr11:7222520 | Bma11g00549 | Bma-Chr11:7350242 | 3.50E-96 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00549 | K05759 | - | jre:109010102 | 250.751 |