Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00589 | ATGAAAAAGGGTGGCTTAATCCCCAAGCTCCATATCTCTCTTCCTCCTTCTGATGAGATTTCATTCGCTAAATTCTTGACGCAAAGCGGTACGTTTAAGGACGGTGATCTGCTTGTCAATAGGGATGGAGTTCGGATTGTAACTGAGACCGAAGCTGAAGCTCCTCCTCCAATTAAACCCTCAGACAACAACCAGTTGAGTTTGGCAGATATAGACACAATCAAAGTCATTGGAAAAGGAAATGGTGGAATTGTGCAATTGGTGAGACACAAATGGACAGGCCAGTTTTTTGCATTAAAGGTAATTCAAATGAGCATTGACGAATCTTATCGCAAGCTGCTAGCACAGGAACTGAAAATTAATCAGTCAGCACAATGTCCATATGTTGTTGTATGTTATCAGTCTTTCTATGACAATGGTGCCATTTCTATCATATTAGAGTACATGGATGGAGGATCTTTGGCTGATTTTTTGAAGAAGGTTAAAAAAATTCCGGAACCTTATCTTGCTGCCATCTGTTTGCAGGTTCTGAAAGGGTTGTCTTACCTGCATCATGAAAAGCACGTTATTCATAGGGACTTGAAACCTTCTAATTTGTTAATAAATCACAGAGGGGAAGTTAAAATCACTGACTTTGGTGTAAGTACCATGATGGCAACCACCTCTGGACTGGCAAATACTTTTGTGGGCACATATAACTATATGTCTCCAGAGCGAATTACTGGAGGCAGACATGACAATAAAAGTGACATCTGGAGCTTGGGATTAGTACTGCTTGAGTGTGCGATAGGTCAATTCCTTATTTGCCACCAGAGGGAGATGAAGGTTGGGTTAACTTTTATGAGCTGA | 849 | 40.87 | MKKGGLIPKLHISLPPSDEISFAKFLTQSGTFKDGDLLVNRDGVRIVTETEAEAPPPIKPSDNNQLSLADIDTIKVIGKGNGGIVQLVRHKWTGQFFALKVIQMSIDESYRKLLAQELKINQSAQCPYVVVCYQSFYDNGAISIILEYMDGGSLADFLKKVKKIPEPYLAAICLQVLKGLSYLHHEKHVIHRDLKPSNLLINHRGEVKITDFGVSTMMATTSGLANTFVGTYNYMSPERITGGRHDNKSDIWSLGLVLLECAIGQFLICHQREMKVGLTFMS | 282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8789921 | 8791975 | - | Bma006104.1 | Bma11g00589 | 90991 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00589 | 282 | SMART | serkin_6 | 71 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00589 | 282 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 1 | 268 | - | - | |
Bma11g00589 | 282 | Gene3D | Phosphorylase Kinase; domain 1 | 49 | 150 | - | - | |
Bma11g00589 | 282 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672|GO:0006468 | |
Bma11g00589 | 282 | Pfam | Protein kinase domain | 73 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00589 | 282 | PANTHER | MAP KINASE KINASE | 1 | 268 | - | - | |
Bma11g00589 | 282 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 281 | - | - | |
Bma11g00589 | 282 | ProSiteProfiles | Protein kinase domain profile. | 71 | 282 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00589 | 282 | CDD | PKc_MAPKK_plant_like | 69 | 266 | - | - | |
Bma11g00589 | 282 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 100 | IPR017441 | GO:0005524 | |
Bma11g00589 | 282 | SUPERFAMILY | Protein kinase-like (PK-like) | 66 | 275 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g00881 | Bma-Chr6:43614687 | Bma11g00589 | Bma-Chr11:8789921 | 3.65E-141 | dispersed | |
Bma10g00703 | Bma-Chr10:10617046 | Bma11g00589 | Bma-Chr11:8789921 | 1.98E-52 | dispersed | |
Bma11g00589 | Bma-Chr11:8789921 | Bma14g01892 | Bma-Chr14:40447577 | 1.30E-50 | dispersed | |
Bma11g00589 | Bma-Chr11:8789921 | Bma01g02722 | Bma-Chr1:84565008 | 1.21E-30 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66786 | PF00069 | Pkinase | 9.30E-58 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00589 | K20603 | - | jre:109008993 | 456.062 |