Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00589 ATGAAAAAGGGTGGCTTAATCCCCAAGCTCCATATCTCTCTTCCTCCTTCTGATGAGATTTCATTCGCTAAATTCTTGACGCAAAGCGGTACGTTTAAGGACGGTGATCTGCTTGTCAATAGGGATGGAGTTCGGATTGTAACTGAGACCGAAGCTGAAGCTCCTCCTCCAATTAAACCCTCAGACAACAACCAGTTGAGTTTGGCAGATATAGACACAATCAAAGTCATTGGAAAAGGAAATGGTGGAATTGTGCAATTGGTGAGACACAAATGGACAGGCCAGTTTTTTGCATTAAAGGTAATTCAAATGAGCATTGACGAATCTTATCGCAAGCTGCTAGCACAGGAACTGAAAATTAATCAGTCAGCACAATGTCCATATGTTGTTGTATGTTATCAGTCTTTCTATGACAATGGTGCCATTTCTATCATATTAGAGTACATGGATGGAGGATCTTTGGCTGATTTTTTGAAGAAGGTTAAAAAAATTCCGGAACCTTATCTTGCTGCCATCTGTTTGCAGGTTCTGAAAGGGTTGTCTTACCTGCATCATGAAAAGCACGTTATTCATAGGGACTTGAAACCTTCTAATTTGTTAATAAATCACAGAGGGGAAGTTAAAATCACTGACTTTGGTGTAAGTACCATGATGGCAACCACCTCTGGACTGGCAAATACTTTTGTGGGCACATATAACTATATGTCTCCAGAGCGAATTACTGGAGGCAGACATGACAATAAAAGTGACATCTGGAGCTTGGGATTAGTACTGCTTGAGTGTGCGATAGGTCAATTCCTTATTTGCCACCAGAGGGAGATGAAGGTTGGGTTAACTTTTATGAGCTGA 849 40.87 MKKGGLIPKLHISLPPSDEISFAKFLTQSGTFKDGDLLVNRDGVRIVTETEAEAPPPIKPSDNNQLSLADIDTIKVIGKGNGGIVQLVRHKWTGQFFALKVIQMSIDESYRKLLAQELKINQSAQCPYVVVCYQSFYDNGAISIILEYMDGGSLADFLKKVKKIPEPYLAAICLQVLKGLSYLHHEKHVIHRDLKPSNLLINHRGEVKITDFGVSTMMATTSGLANTFVGTYNYMSPERITGGRHDNKSDIWSLGLVLLECAIGQFLICHQREMKVGLTFMS 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8789921 8791975 - Bma006104.1 Bma11g00589 90991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00589 282 SMART serkin_6 71 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00589 282 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 268 - -
Bma11g00589 282 Gene3D Phosphorylase Kinase; domain 1 49 150 - -
Bma11g00589 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Bma11g00589 282 Pfam Protein kinase domain 73 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00589 282 PANTHER MAP KINASE KINASE 1 268 - -
Bma11g00589 282 Gene3D Transferase(Phosphotransferase) domain 1 151 281 - -
Bma11g00589 282 ProSiteProfiles Protein kinase domain profile. 71 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00589 282 CDD PKc_MAPKK_plant_like 69 266 - -
Bma11g00589 282 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Bma11g00589 282 SUPERFAMILY Protein kinase-like (PK-like) 66 275 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00881 Bma-Chr6:43614687 Bma11g00589 Bma-Chr11:8789921 3.65E-141 dispersed
Bma10g00703 Bma-Chr10:10617046 Bma11g00589 Bma-Chr11:8789921 1.98E-52 dispersed
Bma11g00589 Bma-Chr11:8789921 Bma14g01892 Bma-Chr14:40447577 1.30E-50 dispersed
Bma11g00589 Bma-Chr11:8789921 Bma01g02722 Bma-Chr1:84565008 1.21E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66786 PF00069 Pkinase 9.30E-58 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00589 K20603 - jre:109008993 456.062