Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00608 | ATGAGTTGTAGTAGTAGATTTCCATTTACACCAGCTCAGTGGCAAGAGCTTGAACACCAAGCTCTCATTTTCAAGTACATGGTTTCAGGCTTCCCCATCCCTCATGATCTTCTCTTTAGTGTCAAAAGAAACTGCTTGGATTCTCATCTCTTCCCTCGCCAACCTCAGCAAGTGGGGTGGAACTATTTAAACATGGGTCTGGGGAGAAAAATCGACCCAGAACCAGGGAGGTGCAGGAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAAGCATACCCAGATTCAAAGTACTGTGAAAGACACATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTAATTTCAAAAACACAACAACCAACCCAGAAGCAAACCTTTCACCATCACCAGTCCTGTCTTCCCTGCCCAAGAACCAATTTTCTCTATCTACAAACCCTCATTCTCTCTCCTCCGATGCCAGCCGCCATTACCCCCAGCTTCACCATTCTTCTTTCCATAACAATACCCATCTTCACCCCCCTTCTCTTTATCGTCAAACCTCTTCAAGGCCACCTGGTTTTGTTTTGGACGTGGAGACCCCCTCTTTCTTGGACTCGTGCTCTTACTCCCAGCTTGCAACAGATTACAGAAGAAATAGGTGTGCTTATCGGATGAAAGAGGAACTGGGTGAGTATGCTTTCTTCTCAGAATCTTCTGGAACAATGAGAAGCTTCTCAGCTTCTCCCATGGAGGATTCATGGCAGTTGACGCCTCTGACAATGAGTTGCTCTTCGTCCTCATCCAAACAGAGGGGCTCGAGTTTGCAGAGTGACGACTACTCATACTTGCAGCTCCAAAGCGTCACTGAGACCACCGCCCCACAAGGCCAACCGGAAAAGGCTCCTCCAATGGCAATGAAGATGGAGGGAGAAGAACCACAGAAGATCTTCCACCGTTTCTTCGACGAATGGCCACCAAAAGACAGACACTCATGGCTTGAAGTCGATGATAAACCCTCAAATAACGGGTCAATCTCGAGTACTCAACTCTCCATTTCCATCCCAAACTCTACCCTAGATTTCTCCGTCTTCAATTCCAGAATCCAGAGTGGAAATGAAAACTCAAGTATCAAACCAGCTCATTTTTCAAATTCAGATCCCTAA | 1152 | 46.44 | MSCSSRFPFTPAQWQELEHQALIFKYMVSGFPIPHDLLFSVKRNCLDSHLFPRQPQQVGWNYLNMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVNFKNTTTNPEANLSPSPVLSSLPKNQFSLSTNPHSLSSDASRHYPQLHHSSFHNNTHLHPPSLYRQTSSRPPGFVLDVETPSFLDSCSYSQLATDYRRNRCAYRMKEELGEYAFFSESSGTMRSFSASPMEDSWQLTPLTMSCSSSSSKQRGSSLQSDDYSYLQLQSVTETTAPQGQPEKAPPMAMKMEGEEPQKIFHRFFDEWPPKDRHSWLEVDDKPSNNGSISSTQLSISIPNSTLDFSVFNSRIQSGNENSSIKPAHFSNSDP | 383 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9050905 | 9052275 | - | Bma006126.1 | Bma11g00608 | 91010 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00608 | 383 | PANTHER | GROWTH-REGULATING FACTOR 6 | 5 | 354 | - | - | |
Bma11g00608 | 383 | ProSiteProfiles | QLQ domain profile. | 8 | 43 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Bma11g00608 | 383 | Pfam | QLQ | 8 | 41 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Bma11g00608 | 383 | ProSiteProfiles | WRC domain profile. | 72 | 116 | IPR014977 | - | |
Bma11g00608 | 383 | MobiDBLite | consensus disorder prediction | 103 | 184 | - | - | |
Bma11g00608 | 383 | PANTHER | - | 5 | 354 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 | |
Bma11g00608 | 383 | SMART | QLQ_2 | 7 | 43 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Bma11g00608 | 383 | Pfam | WRC | 73 | 115 | IPR014977 | - | |
Bma11g00608 | 383 | MobiDBLite | consensus disorder prediction | 115 | 184 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00561 | Bma11g00608 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00146 | Bma-Chr8:1877472 | Bma11g00608 | Bma-Chr11:9050905 | 3.75E-59 | dispersed | |
Bma11g00608 | Bma-Chr11:9050905 | Bma12g01289 | Bma-Chr12:45840531 | 9.59E-60 | dispersed | |
Bma09g00981 | Bma-Chr9:49339373 | Bma11g00608 | Bma-Chr11:9050905 | 9.32E-17 | transposed | |
Bma11g00608 | Bma-Chr11:9050905 | Bma07g00561 | Bma-Chr7:7643668 | 4.92E-91 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58052 | PF08879 | WRC | 8.10E-21 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00608 | - | - | tcc:18588300 | 408.297 |