Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00608 ATGAGTTGTAGTAGTAGATTTCCATTTACACCAGCTCAGTGGCAAGAGCTTGAACACCAAGCTCTCATTTTCAAGTACATGGTTTCAGGCTTCCCCATCCCTCATGATCTTCTCTTTAGTGTCAAAAGAAACTGCTTGGATTCTCATCTCTTCCCTCGCCAACCTCAGCAAGTGGGGTGGAACTATTTAAACATGGGTCTGGGGAGAAAAATCGACCCAGAACCAGGGAGGTGCAGGAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAAGCATACCCAGATTCAAAGTACTGTGAAAGACACATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTAATTTCAAAAACACAACAACCAACCCAGAAGCAAACCTTTCACCATCACCAGTCCTGTCTTCCCTGCCCAAGAACCAATTTTCTCTATCTACAAACCCTCATTCTCTCTCCTCCGATGCCAGCCGCCATTACCCCCAGCTTCACCATTCTTCTTTCCATAACAATACCCATCTTCACCCCCCTTCTCTTTATCGTCAAACCTCTTCAAGGCCACCTGGTTTTGTTTTGGACGTGGAGACCCCCTCTTTCTTGGACTCGTGCTCTTACTCCCAGCTTGCAACAGATTACAGAAGAAATAGGTGTGCTTATCGGATGAAAGAGGAACTGGGTGAGTATGCTTTCTTCTCAGAATCTTCTGGAACAATGAGAAGCTTCTCAGCTTCTCCCATGGAGGATTCATGGCAGTTGACGCCTCTGACAATGAGTTGCTCTTCGTCCTCATCCAAACAGAGGGGCTCGAGTTTGCAGAGTGACGACTACTCATACTTGCAGCTCCAAAGCGTCACTGAGACCACCGCCCCACAAGGCCAACCGGAAAAGGCTCCTCCAATGGCAATGAAGATGGAGGGAGAAGAACCACAGAAGATCTTCCACCGTTTCTTCGACGAATGGCCACCAAAAGACAGACACTCATGGCTTGAAGTCGATGATAAACCCTCAAATAACGGGTCAATCTCGAGTACTCAACTCTCCATTTCCATCCCAAACTCTACCCTAGATTTCTCCGTCTTCAATTCCAGAATCCAGAGTGGAAATGAAAACTCAAGTATCAAACCAGCTCATTTTTCAAATTCAGATCCCTAA 1152 46.44 MSCSSRFPFTPAQWQELEHQALIFKYMVSGFPIPHDLLFSVKRNCLDSHLFPRQPQQVGWNYLNMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVNFKNTTTNPEANLSPSPVLSSLPKNQFSLSTNPHSLSSDASRHYPQLHHSSFHNNTHLHPPSLYRQTSSRPPGFVLDVETPSFLDSCSYSQLATDYRRNRCAYRMKEELGEYAFFSESSGTMRSFSASPMEDSWQLTPLTMSCSSSSSKQRGSSLQSDDYSYLQLQSVTETTAPQGQPEKAPPMAMKMEGEEPQKIFHRFFDEWPPKDRHSWLEVDDKPSNNGSISSTQLSISIPNSTLDFSVFNSRIQSGNENSSIKPAHFSNSDP 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9050905 9052275 - Bma006126.1 Bma11g00608 91010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00608 383 PANTHER GROWTH-REGULATING FACTOR 6 5 354 - -
Bma11g00608 383 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bma11g00608 383 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bma11g00608 383 ProSiteProfiles WRC domain profile. 72 116 IPR014977 -
Bma11g00608 383 MobiDBLite consensus disorder prediction 103 184 - -
Bma11g00608 383 PANTHER - 5 354 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bma11g00608 383 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bma11g00608 383 Pfam WRC 73 115 IPR014977 -
Bma11g00608 383 MobiDBLite consensus disorder prediction 115 184 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00561 Bma11g00608 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00146 Bma-Chr8:1877472 Bma11g00608 Bma-Chr11:9050905 3.75E-59 dispersed
Bma11g00608 Bma-Chr11:9050905 Bma12g01289 Bma-Chr12:45840531 9.59E-60 dispersed
Bma09g00981 Bma-Chr9:49339373 Bma11g00608 Bma-Chr11:9050905 9.32E-17 transposed
Bma11g00608 Bma-Chr11:9050905 Bma07g00561 Bma-Chr7:7643668 4.92E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58052 PF08879 WRC 8.10E-21 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00608 - - tcc:18588300 408.297